More than 300 homologs were found in PanDaTox collection
for query gene Swoo_0712 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.27 
 
 
626 aa  645    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.75 
 
 
626 aa  635    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  100 
 
 
627 aa  1271    Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  49.92 
 
 
626 aa  589  1e-167  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  35.66 
 
 
627 aa  360  6e-98  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  36.01 
 
 
639 aa  357  2.9999999999999997e-97  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  36.16 
 
 
627 aa  354  2e-96  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  36.91 
 
 
633 aa  353  4e-96  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  34.13 
 
 
630 aa  350  5e-95  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  36.66 
 
 
628 aa  348  1e-94  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.22 
 
 
623 aa  345  1e-93  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  36.07 
 
 
630 aa  342  1e-92  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.07 
 
 
630 aa  342  1e-92  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  36.07 
 
 
630 aa  341  2e-92  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  36.07 
 
 
630 aa  340  5e-92  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  39.28 
 
 
623 aa  331  3e-89  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.1 
 
 
623 aa  330  4e-89  Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  35.9 
 
 
631 aa  330  4e-89  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  34.48 
 
 
628 aa  330  5.0000000000000004e-89  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  34.73 
 
 
628 aa  330  7e-89  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  34.58 
 
 
630 aa  329  1.0000000000000001e-88  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_3950  methyl-accepting chemotaxis sensory transducer  36.59 
 
 
623 aa  328  2.0000000000000001e-88  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3752  methyl-accepting chemotaxis sensory transducer  36.44 
 
 
623 aa  323  5e-87  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  34.76 
 
 
630 aa  323  6e-87  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_004347  SO_4557  methyl-accepting chemotaxis protein  35.96 
 
 
623 aa  322  9.999999999999999e-87  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_3825  methyl-accepting chemotaxis sensory transducer  36.12 
 
 
623 aa  322  9.999999999999999e-87  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  34.76 
 
 
630 aa  322  9.999999999999999e-87  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  34.63 
 
 
630 aa  322  1.9999999999999998e-86  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  35.37 
 
 
624 aa  320  3e-86  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0323  methyl-accepting chemotaxis sensory transducer  36.71 
 
 
623 aa  317  6e-85  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  32.13 
 
 
626 aa  313  6.999999999999999e-84  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0193  methyl-accepting chemotaxis sensory transducer  35.99 
 
 
623 aa  312  1e-83  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4274  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.21 
 
 
623 aa  311  2.9999999999999997e-83  Shewanella baltica OS195  Bacteria  normal  normal  0.179842 
 
 
-
 
NC_009665  Shew185_4141  methyl-accepting chemotaxis sensory transducer  36.21 
 
 
623 aa  311  2.9999999999999997e-83  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0194  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.21 
 
 
623 aa  311  2.9999999999999997e-83  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  34.54 
 
 
630 aa  308  3e-82  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.16 
 
 
632 aa  302  1e-80  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  32.35 
 
 
636 aa  294  3e-78  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  33.77 
 
 
627 aa  293  5e-78  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  36.63 
 
 
623 aa  288  2.9999999999999996e-76  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  34.04 
 
 
629 aa  284  4.0000000000000003e-75  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  32.3 
 
 
626 aa  283  5.000000000000001e-75  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  36.28 
 
 
622 aa  281  2e-74  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  33.22 
 
 
626 aa  281  4e-74  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  31.35 
 
 
632 aa  281  4e-74  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  34.5 
 
 
623 aa  279  9e-74  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_4216  methyl-accepting chemotaxis sensory transducer  31.72 
 
 
647 aa  279  1e-73  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2544  methyl-accepting chemotaxis sensory transducer  32.3 
 
 
633 aa  279  1e-73  Shewanella baltica OS185  Bacteria  hitchhiker  0.00517521  n/a   
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.32 
 
 
628 aa  276  6e-73  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  29.32 
 
 
643 aa  275  2.0000000000000002e-72  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.57 
 
 
626 aa  275  2.0000000000000002e-72  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  29.17 
 
 
628 aa  274  4.0000000000000004e-72  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.87 
 
 
630 aa  273  5.000000000000001e-72  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  29.34 
 
 
629 aa  272  2e-71  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  30.85 
 
 
630 aa  271  2.9999999999999997e-71  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  29.76 
 
 
629 aa  270  4e-71  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  29.97 
 
 
629 aa  269  1e-70  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  30.54 
 
 
626 aa  268  2.9999999999999995e-70  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  34.39 
 
 
622 aa  267  2.9999999999999995e-70  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  33.39 
 
 
652 aa  267  5e-70  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  31.52 
 
 
629 aa  265  2e-69  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  29.8 
 
 
632 aa  262  1e-68  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  35.73 
 
 
714 aa  261  3e-68  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_009457  VC0395_A1741  methyl-accepting chemotaxis protein  34.37 
 
 
623 aa  261  3e-68  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  34.46 
 
 
622 aa  261  4e-68  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  29.51 
 
 
632 aa  258  2e-67  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  35.17 
 
 
714 aa  256  8e-67  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  32.98 
 
 
712 aa  256  9e-67  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  30.48 
 
 
629 aa  256  1.0000000000000001e-66  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.33 
 
 
624 aa  254  3e-66  Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  33.89 
 
 
713 aa  254  4.0000000000000004e-66  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  32.69 
 
 
712 aa  254  5.000000000000001e-66  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_003910  CPS_3839  methyl-accepting chemotaxis protein  30.09 
 
 
636 aa  252  1e-65  Colwellia psychrerythraea 34H  Bacteria  normal  0.406017  n/a   
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  29.94 
 
 
629 aa  252  1e-65  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  30.03 
 
 
625 aa  251  2e-65  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  29.7 
 
 
629 aa  251  2e-65  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  35.29 
 
 
714 aa  248  3e-64  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  34.94 
 
 
714 aa  247  4e-64  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3605  methyl-accepting chemotaxis sensory transducer  30.89 
 
 
666 aa  247  4e-64  Shewanella woodyi ATCC 51908  Bacteria  normal  0.644417  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  33.58 
 
 
716 aa  247  4e-64  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  31.16 
 
 
646 aa  246  9e-64  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  35.15 
 
 
715 aa  244  5e-63  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.14 
 
 
624 aa  243  6e-63  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_009456  VC0395_0962  methyl-accepting chemotaxis protein  30.35 
 
 
643 aa  242  2e-62  Vibrio cholerae O395  Bacteria  hitchhiker  0.000917898  n/a   
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  34.07 
 
 
714 aa  241  2e-62  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  31.76 
 
 
646 aa  241  4e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  31.75 
 
 
624 aa  239  8e-62  Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_009654  Mmwyl1_0130  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
671 aa  239  9e-62  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4580  methyl-accepting chemotaxis sensory transducer  31.36 
 
 
648 aa  239  1e-61  Pseudomonas putida W619  Bacteria  normal  normal  0.0108713 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  31.55 
 
 
624 aa  238  3e-61  Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  32.5 
 
 
648 aa  238  4e-61  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  31.33 
 
 
695 aa  237  5.0000000000000005e-61  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  33.47 
 
 
640 aa  237  5.0000000000000005e-61  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
688 aa  235  2.0000000000000002e-60  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  33.58 
 
 
714 aa  234  3e-60  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  33.96 
 
 
688 aa  233  8.000000000000001e-60  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
640 aa  233  8.000000000000001e-60  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  41.9 
 
 
714 aa  233  8.000000000000001e-60  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
688 aa  232  1e-59  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  33.58 
 
 
738 aa  232  1e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
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