Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4190 |
Symbol | |
ID | 5871990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4688055 |
End bp | 4690121 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641549317 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001670414 |
Protein GI | 167035183 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.251316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTGC GTCGCCTCTC CATCCAATGG AAGATCACCT TGCTTGCCGG CCTGTGTCTG CTGGCCATCG TCGCCTTGCT GGTGGCCACC TCGCTGACCC AGGCGCAACG CAGCGCGGCC TTGGTCAACC AGGCCAACAC CGCCATGCTC GACAGCAGCG CCCGCCTGCG CCTGCAGGCC CATGCGCAAA CCCAGGCCCT GCGAATACAG CGCTACTTCA TGGACGCCTA CCAATACGGC AATGGCTTTG CCCGCCTGGT ACAGGTACTG AAGGCCCGTG GCGGCAGCGA CCTGCGCGCC GAACTGACCC GCCAGGCGCG TGCCAGCCTG GCCGGCAACC CGGATGTGAT CGGCCTGTAC TTGGTATTCC AGCCCGATGC CCTGGACCAG CAAGACAGCC AGTACCTTGG CCAGGACGCC ATGGGCAGCA ATGAGCGCGG ACGCTTTTCG CTTTACTGGT CGCAACCAAC CCCCGGCACC CTGGAACTGG AAGCCATGCC GGAAACGATG CTTGGCGATA CCAGTATCGG CAGCAACGGC GCAGCGAAAA ACCGCTGGCT GACCTGCCCG CAGGACACCG GCAGAACCTG CATGCTCGAA CCGTACCTCG ACGAGGTCAA CGGCCGCCAA GTACTGATGA CCAGCATCGC CTTGCCGCTG CTGGAGCACG GCAAGGTGGT CGGCGTGGTC GGCCTGGACA TCGGCCTGGC CAACCTGCAG CAACTGAGCG TGGACGGCCG CCGCGAGCTG TTCGATGGCC AGGGCCAAGT GAGTATCGCC AGCGCCGCCG GCCTGCTGGC CGGTAACAGC CGCGACGACA CGACGCTCGG CAAACCCATG GACAACGCAG TAGCCGATGG CCTGCTGCGC GTGGCCCACC CTTTCACACC AATCCCTGAC GCAGCCCCAT GGCAAGTGTT GCTGGAGCTG CCGGAAAGCG TGCTGCAGGC CCCTGCCGCC GCACTCAACC AGCGCCTGGA CGCGCACAAC CAACGCGCCA ACCTCACCAG CCTGCTGATC GGCCTGGGCG CAGCCGTGGT CGGCTTGCTG CTGGTGTGGC TGACCGCACG CGGCGTTACT CGGCCAATCC TGGCCGTGGC CGCACGCCTG GAAGACATCG CCAGCGGCGA AGGCGACCTG ACCCGTCGCC TGGACTACGC CCGCCAGGAC GAGCTGGGCC AGCTCACCGG CTGGTTCAAC CGCTTCCTCG ACAAGCTGCA GCCAGTCATC GCCCAAGTCA AAGGCTCACT GCAGGAGGCC CGCGGCACCG CCGACCAGTC GGCCGCCATC GCCAGCCAGA CCAGCAACGG CATGCAGCAA CAGCATCGCG AAATCGAACA GGTGGCCACG GCGGCCAACG AAATGAGCGC CACTGCCCTG GATGTCGCCC ATAACGCCTC GCAGGCGGCC CAGGCCGCAC GCGCCGCCGA CCAGGCCAGC CAGGAAGGCC TGCAACTGAT CGACAGCACG CGTCAAGGCA TCGATCGACT GGCCGCCGGC ATGAACACAG CCATGGACGA AGCGCGTGCG CTGGAAGGCC GCAGCGGGCA GATCGGCTCG GTGCTGGAGG TGATCCGTAC CATTGCCGAG CAGACCAACC TGCTGGCACT GAATGCCGCC ATCGAAGCGG CTCGTGCCGG CGAAGCCGGG CGTGGCTTCG CCGTGGTCGC CGACGAGGTG CGCGGCCTGG CTCAACGCAC GCAGGTGTCG GTGGAGGAAA TTCGCCAGGT CATCGAAGGC CTGCAGCAAG GCACGCAGGA TGTCGTCGGT GCCATGCATG AAGGCCAGCG CCAGGCCCAG GACAGCGCCG CGCGCATGGA GCAGGCGCTG CCGGCACTGC AGCGAATTGG CGAGGCGGTG GCGGTCATCA GCGACATGAA CTTGCAAATT GCCTCGGCGG CTGAGGAGCA GAGCGCGGTG GCCGAGGAAG TGAACCGCAA CGTGGCCGGC ATCCGTGATG TGACAGAATC ACTGGCTGGC CAGGCTGACG AATCGGCGCG CATCAGCCAG GCGCTGAACC GGCTTGCCAA TCAGCAGCAG GCGCTGATGG AGCAATTTCG CGTCTAG
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Protein sequence | MPLRRLSIQW KITLLAGLCL LAIVALLVAT SLTQAQRSAA LVNQANTAML DSSARLRLQA HAQTQALRIQ RYFMDAYQYG NGFARLVQVL KARGGSDLRA ELTRQARASL AGNPDVIGLY LVFQPDALDQ QDSQYLGQDA MGSNERGRFS LYWSQPTPGT LELEAMPETM LGDTSIGSNG AAKNRWLTCP QDTGRTCMLE PYLDEVNGRQ VLMTSIALPL LEHGKVVGVV GLDIGLANLQ QLSVDGRREL FDGQGQVSIA SAAGLLAGNS RDDTTLGKPM DNAVADGLLR VAHPFTPIPD AAPWQVLLEL PESVLQAPAA ALNQRLDAHN QRANLTSLLI GLGAAVVGLL LVWLTARGVT RPILAVAARL EDIASGEGDL TRRLDYARQD ELGQLTGWFN RFLDKLQPVI AQVKGSLQEA RGTADQSAAI ASQTSNGMQQ QHREIEQVAT AANEMSATAL DVAHNASQAA QAARAADQAS QEGLQLIDST RQGIDRLAAG MNTAMDEARA LEGRSGQIGS VLEVIRTIAE QTNLLALNAA IEAARAGEAG RGFAVVADEV RGLAQRTQVS VEEIRQVIEG LQQGTQDVVG AMHEGQRQAQ DSAARMEQAL PALQRIGEAV AVISDMNLQI ASAAEEQSAV AEEVNRNVAG IRDVTESLAG QADESARISQ ALNRLANQQQ ALMEQFRV
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