Gene Shew185_2544 details

Gene Information

• Locus tag: Shew185_2544
• ID: 5370100
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 3041672
• End bp: 3043573
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640830756
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001366743
• Protein GI: 153001062
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00517521
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATAGGAT TTAGAAAATC GCTCATCGCG TCGATGGTGG CTTTGGTCAC CCTCTGTTTG 
TTGGTTTCCA ACTGGTTGTC TTATATGGAA ATAAAGCAAA ACACCATTGA CAGCGCCAAC 
GAGAAACTCA CCGATGTGGT AAAATATGAG TCCAGTAATA TTGAAAACTG GTTTAAAGAG 
AAAGCCGATG CCATCGATGC TCTGGCTTTG CACTATCAGG CTGGCACGTA TCGGGACAAT 
TATGTCAATG CGGCCAGAAT GGCTACCGAC GTAGGCGGTG TCGCTCGTAT CTACTTTGGC 
TTTGATGACG GTAGTGCTTA CTCAACGGAG ACCAATGCCA AGTGGAGAAA TGGTAAAGCA 
ATACCAGAAA AATACGACCC ACGCGTTCGT CCATGGTATC GACAAGGCAA ATCATCTCAC 
AACCTTGATA TTACCGACAT CTATGTCGAT GATGGCACTG GGCACGATGT TATCTCCATC 
TTAAAGAACC TCGGCAACGG CGTTGTGCTT GGCGATATTG AACTCACCTA CCTGAGTGAA 
ACCGTCAAGG CTGTTGACTA CCTTGGCGCA GTCACATTGA TCACAGACCA AACAGGTAAA 
GTACTGGCAT CAGAATCAAG TAAGCTAGTG ACTGGCACGC GATTTTCTGA CTTTGGCTTG 
GGACAAGTAG AACAAAAACT ATTGTCCAAT GATGAGGTGA TGCAGGAATA CAGCATAGAT 
GGCCAAGATA CATTAGCCTT CTCTAAAGCG ATTAAACTCG TCAACGGCAA AAAGTGGTAT 
CTGTTTGTTG GGCTCGACAA ATCGGTGGCC TATGCCGCTG TGGACAAAGC ACTTTATAGT 
GCTCTACTCT CATCGGGAAT AATGCTCGCC TTAGCGATTG CTACCTTGCT GGGCGTGCTC 
TCTATCCTCT ACCGACCGAT TCTATCACTA AAACAGATGG TGAGTGAATT GTCGCACGGC 
AATGGCGATC TCACTCGACG CTTAGAGGTT AGAACAGATG ATGATTTAGG CCAGATCTCT 
AAGGGGATTA ATCTCTTTAT TGAGCAGCTG CAACGTATGA TGCTAGAAGT GTTGCAATCG 
TCCACTCATA TCGCCAATAG TGTTGAGCGT CTTAAAGCTG AAACCGACGC TAATAGTGTA 
ATACTGACAG CTCACGCCAC CGAAACCGAA CAGATTGTTG CCGCCATTGA GGAGATGAGT 
GCGACGGCAA ACGATGTAGC GCGCAACGGT GCAGAAACCG CCTCGTTCAC TCAGATCACC 
AAGCAGCAAA CATTAGCGTC AAAATCGGTT GTCGCCGACG CCACGGATAC CGTTGCCAAA 
TTGGTGAGAG AAGTGGAAAA CACCTCTGCC AGCATTGCGC AAATAGATAG AGATACTGTC 
AATATTACTC AAGTGCTAAA AGTCATTGGC GAGATAGCCG ATCAAACTAA CCTATTAGCA 
CTCAATGCCG CCATCGAGGC TGCCCGAGCA GGTGAACAAG GTCGTGGCTT TGCCGTGGTG 
GCCGACGAGG TAAGAGCATT AGCGGCACGA ACCCAATCCA GTACCGCTGA AATCGAGGTG 
ACGCTCTATA CACTAACAGA AACCTCAAAA ACCGCCATCT CGTCGATGGA TATCACTAAA 
AATACCTGCC TTAAAACTGC CGACACCACC AAAAAAGTGG CGAGCGATCT TGATACCATT 
GGCAGCTCTG TCGATCGTAT TAATGATCTC AATGCGCAAA TAGCCACTGC TGCAGAGGAG 
CAAAGCTCGG TTTCCAATGA GATCACTCGC AACATGTCTG CCATTTGTGA AATGGCTAAT 
GAGTTATCGG TCAACGGTGA GAGTACCGCT AATGAAACAT TAAATTTGGC AGCAGCCAAC 
CAACAACTTA CGCTTATCGT TAATCAGTTC AAATTAACCT AA 

 

Protein sequence

MIGFRKSLIA SMVALVTLCL LVSNWLSYME IKQNTIDSAN EKLTDVVKYE SSNIENWFKE 
KADAIDALAL HYQAGTYRDN YVNAARMATD VGGVARIYFG FDDGSAYSTE TNAKWRNGKA 
IPEKYDPRVR PWYRQGKSSH NLDITDIYVD DGTGHDVISI LKNLGNGVVL GDIELTYLSE 
TVKAVDYLGA VTLITDQTGK VLASESSKLV TGTRFSDFGL GQVEQKLLSN DEVMQEYSID 
GQDTLAFSKA IKLVNGKKWY LFVGLDKSVA YAAVDKALYS ALLSSGIMLA LAIATLLGVL 
SILYRPILSL KQMVSELSHG NGDLTRRLEV RTDDDLGQIS KGINLFIEQL QRMMLEVLQS 
STHIANSVER LKAETDANSV ILTAHATETE QIVAAIEEMS ATANDVARNG AETASFTQIT 
KQQTLASKSV VADATDTVAK LVREVENTSA SIAQIDRDTV NITQVLKVIG EIADQTNLLA 
LNAAIEAARA GEQGRGFAVV ADEVRALAAR TQSSTAEIEV TLYTLTETSK TAISSMDITK 
NTCLKTADTT KKVASDLDTI GSSVDRINDL NAQIATAAEE QSSVSNEITR NMSAICEMAN 
ELSVNGESTA NETLNLAAAN QQLTLIVNQF KLT