Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4382 |
Symbol | |
ID | 3712825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4938090 |
End bp | 4940306 |
Gene Length | 2217 bp |
Protein Length | 738 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | chemotaxis sensory transducer |
Protein accession | YP_350110 |
Protein GI | 77460603 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.218372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTGA ATGGATTTGG CGAACCGGGC ACCTTCCTGC CTCTTAGCCA ACAGCTCATC CATTCGCGAG AACGTCCCAT GTTCGACTCT CTGTCCATTC GCCTGAAAAT CGTCCTGCTG TCCGGCCTGT GCCTGCTCGG TGTGGTCGCG CTGATCGTTG GCATCAATAT TTACCAGACC AACCAGAACG ACGAACTGGT CAGCACTTCC AGCAGCAAGA TGCTCACCGC CAGTGTGCAG GACCTGCTGC AGGCCAAGGC TGCCGAACAG GCGGTGCAAG TGCAGAAAAC CTTCGGCGAG AGCCTGCTGG TGATCACCGC CCTGGCCGAC CAGGTCAAGG ACATGCGCGT CATGGCTGCC AAGCGTTCGC TGGACGCCGG CGCCCTGCGT GAAGAGTTGA ACCAGAGCCT GAAAACCGCC TTCGAACGCA ACAGCAAGGT GCTCGGCATC TGGCTGGCGT TCGAACCGAA CGGACTGGAT GGCAAGGACA GCGAATTCGC CAACGATGCC GCGCGTCAGT CCAACGAGGC GGGGCGTTTC GCCAGTTACT GGAGCCGTGC TGCGGGTCCG TCGCTGAACA CGATCATGGT CGAAGACGAC ATGAACAAGA CCACCCTCAG CGTCAGCGGC ACGCCTTACA ACAGCTGGTA CACCTGCCCT CGCGACAACA AGCGCACCTG CCTGCTTGAT CCTTACGCCG ATACCGTGGG CGGCAAGGAA ATGCTCATGA CCACCATTTC CGTACCGTTG CTGGTGGACG GCAAGGCCAT CGGCGTGGTC GGCATCGACA TTGCCCTGGA TGCGCTGCAA GCGGCGGCCG TCAATTCCCA GCGTGAGCTG TTCAACAGTG CCGGACACAT GCTGATCGTC TCCGGCAGCG GCGTGCTGGG CGCCTACAGC ACCGACGCAA CCAAAGTCGG CAAAGGCATC ACCGAAACCC TCGGTGCCGA AGGCAAGGAC ATCCTGCAAC TGCTGAGCGC CGGCACGCCG AAGATTCTCG AACAGGGCGA CCTGATCCGC GCCGTGTACC CGGTCGATCC GATTGGCAAC TCCCGGGCCT GGGGCGTGGT CATCGACCTG CCGAAACAAG TGCTGCTGGC CGACTCGGTC AAGCTCCAGG CAGTGCTCGA CGATGCCCAG CAAACCGGCA TGATTACCGC GTTGGCGGTG GCCGTGATCG CCGGCCTGAT CGGTCTGCTG CTGATCTGGC TCACCGCCTC CGGCGTGACC CGCCCGATCA ACAGCGTCGC CGAAATGCTG AAGAACATCG CCAGCGGCGA AGGCGACCTG ACCCAGCGCC TGAACTACAC CAAGAAAGAC GAACTGGGCG AACTGGTGAA CTGGTTCAAC CGCTTCCTCG ACAAGCTGCA ACCGACCATC GCCCAGATCA AACAGAGCAT CACCGAGGCC CGTGGCACCG CCGATCAATC GTCGGAAATC GCCCGCCAGA CCAGCGAAGG CATGCAGGTG CAGTTCCGCG AGATCGATCA GGTGGCAACC GCCTCCAACG AGATGAGCGC CACCGCCCAC GACGTGGCCA ACAGCGCCTC GAATGCGGCC AACGCGGCGA AAGGCGCCGA CCAGTCGGCC AAGGACGGCA TGTCGATCAT CGAGCGCAGC ACCCGCGACA TCAATCAACT GGCGGACGAA GTCAGCAAAG CGGTGACCGA AGTCGAAGAG CTGGCAGTCA ACAGCGAGCA GATCGGTTCG GTGCTGGAAG TGATCCGCAG CATCGCTGAA CAGACCAACC TGCTGGCACT GAACGCCGCG ATCGAAGCGG CCCGTGCCGG TGAAAGCGGT CGTGGTTTTG CGGTGGTGGC CGACGAAGTC CGTAACCTCG CCAAGCGCAC TCAGGATTCG GTGGAAGAAA TCCGCGTGGT CATCGAACGC ATCCAGACCG GCACCCGTGG CGTGGTCGCG ACCATGCACT CGAGCCAGAC CCAGGCTCAC AACAACGCCG GGCAGATCCG CCAGGCCGTG GACGCCCTCG GCAAGATCAG CGACGCGGTC ACCGTGATCA GCGACATGAA CCTGCAGATC GCCAGCGCCG CCGAACAGCA GAGCGCGGTG GCCGAAGAGG TCAACCGCAA CGTCTCGGCG ATCCGCACCG TCACCGAAAC CCTGACCGAA CAGGCCACCG AATCGGCGGC GATCAGCAGC CAGCTCAACG CCCTGGCCAG CCAGCAGATG AAATTGATGG ATCAGTTCCG CGTCTGA
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Protein sequence | MALNGFGEPG TFLPLSQQLI HSRERPMFDS LSIRLKIVLL SGLCLLGVVA LIVGINIYQT NQNDELVSTS SSKMLTASVQ DLLQAKAAEQ AVQVQKTFGE SLLVITALAD QVKDMRVMAA KRSLDAGALR EELNQSLKTA FERNSKVLGI WLAFEPNGLD GKDSEFANDA ARQSNEAGRF ASYWSRAAGP SLNTIMVEDD MNKTTLSVSG TPYNSWYTCP RDNKRTCLLD PYADTVGGKE MLMTTISVPL LVDGKAIGVV GIDIALDALQ AAAVNSQREL FNSAGHMLIV SGSGVLGAYS TDATKVGKGI TETLGAEGKD ILQLLSAGTP KILEQGDLIR AVYPVDPIGN SRAWGVVIDL PKQVLLADSV KLQAVLDDAQ QTGMITALAV AVIAGLIGLL LIWLTASGVT RPINSVAEML KNIASGEGDL TQRLNYTKKD ELGELVNWFN RFLDKLQPTI AQIKQSITEA RGTADQSSEI ARQTSEGMQV QFREIDQVAT ASNEMSATAH DVANSASNAA NAAKGADQSA KDGMSIIERS TRDINQLADE VSKAVTEVEE LAVNSEQIGS VLEVIRSIAE QTNLLALNAA IEAARAGESG RGFAVVADEV RNLAKRTQDS VEEIRVVIER IQTGTRGVVA TMHSSQTQAH NNAGQIRQAV DALGKISDAV TVISDMNLQI ASAAEQQSAV AEEVNRNVSA IRTVTETLTE QATESAAISS QLNALASQQM KLMDQFRV
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