Gene VIBHAR_00119 details

Gene Information

• Locus tag: VIBHAR_00119
• ID: 5554947
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 115785
• End bp: 117665
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640905615
• Product: methyl-accepting chemotaxis protein
• Protein accession: YP_001443394
• Protein GI: 156972487
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAATA CCATCAAACT TAAAATACAG ATTGCGATTG CAGTCATCAT CGCCATTGTT 
AGTGGCGTTC AGGCTTGGGT TTCCGTCAAT CAATTACACG AAGAAACCAC TTCTACCCTT 
AGTCGAGAAA TTCAAAACAT CTCTCAATCG ACTAACCGTT ACATCAGCGA TTGGCTAGCG 
ATTCGCAGCG ACATGATGCT CGCCAACGAA GACAGTATTA CTGGCACTGA TAACGCCGAG 
CGCGAGATGC TACTGACCAA GCGTGCTGGT AAGTTTTTAT CGGTTTACGC TGGCTTCTCT 
GACGGCTCAA TCGCCTATGG TGATAAGACG GAATCATGGC CTGAAGATTA CGACCCACGC 
ACTCGCCCTT GGTACCAAGA TGCGATGGCA AAATCAGGGT TGATCATCAC TGAGCCTTAC 
CAAGACTTCG ATGGCAGCAT TGTGGTTAGC TTTGCCAAAG CTTTTAATCA AGGCAAGGAA 
GGCGTGCTTG CTGCAGACTT GACGGTAACT GACATCATCA CTGAAGTGCT AAACATTCAG 
CTTGATAATG ACGGTTTCGC GTTCTTAGTT GATGGCAACA ATAACCTAGT GGCTTACAAA 
GATGAAAAGC TTAGCCAAAA ACCGCTGACA GAACTCAACC CAGCTTTAAC TCATAGCACG 
ATGATGACGC TAGCCGGTGA TGCGAAGCTA GACACTATTC AATGGCCGAG CCAAGGCGAT 
AAGCTGATTT ACGTGGCGAA AGTGCCGAAC ACCGATTGGT CTTTAGGTAT TGTTCAAGAC 
AAACAAATGG CGTTTGCTTC TGTCTCTGAA CAAGTGACAT TTACCACTAT TGCTTCGATT 
GTGTTGTACC TGATGATTGC GGCAATCAGC ACTAACATCA TCACTCGCCT ACTGCAGCCA 
CTTCAAACAC TGTCTGATGC ACTTTCAGAA CTTTCTCAGG GCGAAGGCGA TCTTACTCAA 
CGCATCAAGA TCGAGCGCAT GGATGAGATT GGGGAACTTG CCACTCACGT GAACCAGTTC 
CTTGCTCAAA TGCAAACTAT GTTGAAGAGT ATTGTTGAAA ACAGTGAGCA ACTTTCGGAA 
CAAGCAAATC AAGCAAATGA GCTATCTGCG ATGGCTGCAG GTCGTGTTGA GCATCAGCAA 
AATGACGTCA ACCAGATTGC CACAGCCATC CATGAGATGT CAGCAACCGC TGCTGAGGTA 
GCAAGCCACG CAGAGCTAAC AGCGAGCGCT TCGCAAAACT CCGCATCTGC TTGTATGGAA 
GGGCAAAACG TCATCCAGAA AAACCGTGAA GCGATTGTTG AACTGGCTGA ACAAGTCAGT 
GATGCCGCCA GTGTGATTTC CGAGCTAGAA GCAAACACGC AAAGCATCAA CCAAATCCTA 
TCGACTATCC AAGGCATTGC TGAACAAACT AACTTATTAG CTCTTAACGC GGCAATTGAA 
GCGGCTCGTG CCGGTGAACA AGGTCGCGGC TTTGCAGTGG TTGCCGATGA AGTACGTGTA 
CTCAGCCAAC GTACTCATGG CTCAACGGAA GAAATCCGCA CCATGATCGA AACATTGCAA 
AACAACACCA AGCTGGCAGT CAATAGCATG CAAACCAGCA CCAGTTTGGC AGATACTAGC 
GTGGATTATG CTCAGCAAGC GCACGACAGC TTAACCAGCA TTACTAACTC GATCACTGAG 
ATCAACGACA TGGCGATGCA AATCGCAAGC GCTGCAGAAG AGCAACGCGC GGTAAGTGAA 
GACATCAGCC GCAACACACA AGGCATTAAA GACGATGCCG ACATGATTGC CGAACAATCG 
CTTAAGAGCA GCGAAGGCGC ACGCCAGATG TACGATACCG CCAATACCAT GCGTGAGAAC 
ATCAGTCGCT TTAAAGTGTA A 

 

Protein sequence

MRNTIKLKIQ IAIAVIIAIV SGVQAWVSVN QLHEETTSTL SREIQNISQS TNRYISDWLA 
IRSDMMLANE DSITGTDNAE REMLLTKRAG KFLSVYAGFS DGSIAYGDKT ESWPEDYDPR 
TRPWYQDAMA KSGLIITEPY QDFDGSIVVS FAKAFNQGKE GVLAADLTVT DIITEVLNIQ 
LDNDGFAFLV DGNNNLVAYK DEKLSQKPLT ELNPALTHST MMTLAGDAKL DTIQWPSQGD 
KLIYVAKVPN TDWSLGIVQD KQMAFASVSE QVTFTTIASI VLYLMIAAIS TNIITRLLQP 
LQTLSDALSE LSQGEGDLTQ RIKIERMDEI GELATHVNQF LAQMQTMLKS IVENSEQLSE 
QANQANELSA MAAGRVEHQQ NDVNQIATAI HEMSATAAEV ASHAELTASA SQNSASACME 
GQNVIQKNRE AIVELAEQVS DAASVISELE ANTQSINQIL STIQGIAEQT NLLALNAAIE 
AARAGEQGRG FAVVADEVRV LSQRTHGSTE EIRTMIETLQ NNTKLAVNSM QTSTSLADTS 
VDYAQQAHDS LTSITNSITE INDMAMQIAS AAEEQRAVSE DISRNTQGIK DDADMIAEQS 
LKSSEGARQM YDTANTMREN ISRFKV