Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0323 |
Symbol | |
ID | 5081202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 345092 |
End bp | 346963 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640497439 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001181854 |
Protein GI | 146291430 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTCAT ACTCGCTCAA ACAGAAAATC CTCATTTCGG TGGTAATCGC CCTTTCGCTC GTGATTGGTT TATTGTCATG GCAAAGCTAT TCCAGTCAAA AATCCCTACT GTTACAGAAC AGCCTCGAGC AGGTTCAGCG GCTAGGCGAT CAACAGGCTG AGCGTATTCA AGAATGGCTA TCTGGGCGTC AAGATATTGT TGGAGCACTT GCAAGCAAGG TTGAAGGTGA CACTTTAAAC ACATTGCAAC AAGCTCAAGC ATCGGGTCGG TTTCAGTTGA CCTATTTTGG TGCTCAAACA GGGCAAATGT TGGATTCTGA TCCCAGTATT GATCGTACAG GTTATGACCC TCGTAGCCGC GCTTGGTATC AGCAAGCGGT TAAAGAGCGT GGCCTTATTC TGACTAAACC CTATATGGAT GTCGCCTATA ACATCTTGGT TGTGACTATG GCGCAGGCAA TTCCTACTGG TGTTGTTGGT GGGGATTTAT CGATTGCCAG TCTGGTGGAC AGTGTGAATC GGATGAAATT ACCCGCAAAT GGTTATGCGA TCATGATACA TAAGGATGGG ACTGTTATTG CTTATAAAGA TCCCACCAAG GCGATGCAAC CCATCAGCAA TATTGACAGT AACCTAAACC ATAATCTGCC TGAACAAAGC CGTAAAGTTG GCGAGCTGCT CTCTATGCAC TTTGAGCATG AAGGCAGAGA TAAGTTAGTT TGGGCTGTCG ATATCCCTAA TACTGATTGG GAGCTAGTAT TAGTGCTTGA TAAGGAGACC TTAGAAGAAC CGCTCACTCG TTTGCTATTG GTGCAGCTTG GATTATCGGC ATTAGTTTTG TTATTGAGTG TATTAGCGAT TTCGTGGCTT GTTAATGTGC TTTTAGGTCC TTTGAGTCGA GTATCTCAAG CCCTAGCTCG CATCGCCGAT GGTAATGGTG ATTTAACCCA GCGTATCGAA GTCGACACTC AAGATGAAGT GGGTGTACTT GCTGACAGCT TTAATCGTTT TGTGGGGAGT CAACATCAGC TTATCAGCCA TATTCGCCAC TTAGCTAACG AATTAGATGC GGATGCTGAA CGTAGTCTAA CCACTACGCA AACTTCCGTT TCTGAGTTAC AACGTCAGCA GCAGGAGGTC GCTATGGTTG CCACAGCGGT GACTGAAATG GCAAGTGCCA CTAATGAGAT TGCAGCTAAT GCTGAGAATA CTGCGACTGC GGCGCAGCAA TCGGCAGCGA GTAGTTTACA GGGTAAGGAC TTAGTGCATA AAACCCGTAA CTCGATTAAC TCACTTGCTA ATGAGGTTTC TCAAGCAACC GATGTGATTG GTGATTTGAG CCGTCACGCT CAGTCTATTT CGAGCATTCT GGGCACAATT CAAGGGATTG CAGAGCAAAC TAACTTACTG GCGCTTAATG CCGCAATTGA AGCGGCTCGT GCGGGTGAGC AGGGACGAGG TTTTGCCGTT GTTGCGGATG AAGTGCGAGT CTTATCGCGT CGCACGCAAG ATTCGACCCA AGAAGTGCAT ACCACCATTG AAACACTGCA ACGCACTACT GCTAGGGCTG TCACTCTGAT GGAAAGTAGT CAAGCCTTAG CGGGTAACAG TGTCGAGGAT GCTAACGCAG CGGCGAAAGC CTTGGAAGAA ATTACCCAAG CTGTGAATGT GATTTCAGAT ATGGCTGGGC AGATTGCCAC CGCTGCGGAA GAGCAAACTC AAGTCACGGG TGAAATTACT CAAAATACCG TAGCGATTAA GGATGTAACC GATGAGATCA CGGCCTCTGC TATGGCTGAC TTAGCTCAGG CTAAGGCACT TAAAGCGCGC GCAAATGATC TGAATGCCCA AGTTGCAACG TTTATCCTTT AA
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Protein sequence | MNSYSLKQKI LISVVIALSL VIGLLSWQSY SSQKSLLLQN SLEQVQRLGD QQAERIQEWL SGRQDIVGAL ASKVEGDTLN TLQQAQASGR FQLTYFGAQT GQMLDSDPSI DRTGYDPRSR AWYQQAVKER GLILTKPYMD VAYNILVVTM AQAIPTGVVG GDLSIASLVD SVNRMKLPAN GYAIMIHKDG TVIAYKDPTK AMQPISNIDS NLNHNLPEQS RKVGELLSMH FEHEGRDKLV WAVDIPNTDW ELVLVLDKET LEEPLTRLLL VQLGLSALVL LLSVLAISWL VNVLLGPLSR VSQALARIAD GNGDLTQRIE VDTQDEVGVL ADSFNRFVGS QHQLISHIRH LANELDADAE RSLTTTQTSV SELQRQQQEV AMVATAVTEM ASATNEIAAN AENTATAAQQ SAASSLQGKD LVHKTRNSIN SLANEVSQAT DVIGDLSRHA QSISSILGTI QGIAEQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRVLSR RTQDSTQEVH TTIETLQRTT ARAVTLMESS QALAGNSVED ANAAAKALEE ITQAVNVISD MAGQIATAAE EQTQVTGEIT QNTVAIKDVT DEITASAMAD LAQAKALKAR ANDLNAQVAT FIL
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