Gene Sputcn32_0323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0323 
Symbol 
ID5081202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp345092 
End bp346963 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content47% 
IMG OID640497439 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001181854 
Protein GI146291430 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCAT ACTCGCTCAA ACAGAAAATC CTCATTTCGG TGGTAATCGC CCTTTCGCTC 
GTGATTGGTT TATTGTCATG GCAAAGCTAT TCCAGTCAAA AATCCCTACT GTTACAGAAC
AGCCTCGAGC AGGTTCAGCG GCTAGGCGAT CAACAGGCTG AGCGTATTCA AGAATGGCTA
TCTGGGCGTC AAGATATTGT TGGAGCACTT GCAAGCAAGG TTGAAGGTGA CACTTTAAAC
ACATTGCAAC AAGCTCAAGC ATCGGGTCGG TTTCAGTTGA CCTATTTTGG TGCTCAAACA
GGGCAAATGT TGGATTCTGA TCCCAGTATT GATCGTACAG GTTATGACCC TCGTAGCCGC
GCTTGGTATC AGCAAGCGGT TAAAGAGCGT GGCCTTATTC TGACTAAACC CTATATGGAT
GTCGCCTATA ACATCTTGGT TGTGACTATG GCGCAGGCAA TTCCTACTGG TGTTGTTGGT
GGGGATTTAT CGATTGCCAG TCTGGTGGAC AGTGTGAATC GGATGAAATT ACCCGCAAAT
GGTTATGCGA TCATGATACA TAAGGATGGG ACTGTTATTG CTTATAAAGA TCCCACCAAG
GCGATGCAAC CCATCAGCAA TATTGACAGT AACCTAAACC ATAATCTGCC TGAACAAAGC
CGTAAAGTTG GCGAGCTGCT CTCTATGCAC TTTGAGCATG AAGGCAGAGA TAAGTTAGTT
TGGGCTGTCG ATATCCCTAA TACTGATTGG GAGCTAGTAT TAGTGCTTGA TAAGGAGACC
TTAGAAGAAC CGCTCACTCG TTTGCTATTG GTGCAGCTTG GATTATCGGC ATTAGTTTTG
TTATTGAGTG TATTAGCGAT TTCGTGGCTT GTTAATGTGC TTTTAGGTCC TTTGAGTCGA
GTATCTCAAG CCCTAGCTCG CATCGCCGAT GGTAATGGTG ATTTAACCCA GCGTATCGAA
GTCGACACTC AAGATGAAGT GGGTGTACTT GCTGACAGCT TTAATCGTTT TGTGGGGAGT
CAACATCAGC TTATCAGCCA TATTCGCCAC TTAGCTAACG AATTAGATGC GGATGCTGAA
CGTAGTCTAA CCACTACGCA AACTTCCGTT TCTGAGTTAC AACGTCAGCA GCAGGAGGTC
GCTATGGTTG CCACAGCGGT GACTGAAATG GCAAGTGCCA CTAATGAGAT TGCAGCTAAT
GCTGAGAATA CTGCGACTGC GGCGCAGCAA TCGGCAGCGA GTAGTTTACA GGGTAAGGAC
TTAGTGCATA AAACCCGTAA CTCGATTAAC TCACTTGCTA ATGAGGTTTC TCAAGCAACC
GATGTGATTG GTGATTTGAG CCGTCACGCT CAGTCTATTT CGAGCATTCT GGGCACAATT
CAAGGGATTG CAGAGCAAAC TAACTTACTG GCGCTTAATG CCGCAATTGA AGCGGCTCGT
GCGGGTGAGC AGGGACGAGG TTTTGCCGTT GTTGCGGATG AAGTGCGAGT CTTATCGCGT
CGCACGCAAG ATTCGACCCA AGAAGTGCAT ACCACCATTG AAACACTGCA ACGCACTACT
GCTAGGGCTG TCACTCTGAT GGAAAGTAGT CAAGCCTTAG CGGGTAACAG TGTCGAGGAT
GCTAACGCAG CGGCGAAAGC CTTGGAAGAA ATTACCCAAG CTGTGAATGT GATTTCAGAT
ATGGCTGGGC AGATTGCCAC CGCTGCGGAA GAGCAAACTC AAGTCACGGG TGAAATTACT
CAAAATACCG TAGCGATTAA GGATGTAACC GATGAGATCA CGGCCTCTGC TATGGCTGAC
TTAGCTCAGG CTAAGGCACT TAAAGCGCGC GCAAATGATC TGAATGCCCA AGTTGCAACG
TTTATCCTTT AA
 
Protein sequence
MNSYSLKQKI LISVVIALSL VIGLLSWQSY SSQKSLLLQN SLEQVQRLGD QQAERIQEWL 
SGRQDIVGAL ASKVEGDTLN TLQQAQASGR FQLTYFGAQT GQMLDSDPSI DRTGYDPRSR
AWYQQAVKER GLILTKPYMD VAYNILVVTM AQAIPTGVVG GDLSIASLVD SVNRMKLPAN
GYAIMIHKDG TVIAYKDPTK AMQPISNIDS NLNHNLPEQS RKVGELLSMH FEHEGRDKLV
WAVDIPNTDW ELVLVLDKET LEEPLTRLLL VQLGLSALVL LLSVLAISWL VNVLLGPLSR
VSQALARIAD GNGDLTQRIE VDTQDEVGVL ADSFNRFVGS QHQLISHIRH LANELDADAE
RSLTTTQTSV SELQRQQQEV AMVATAVTEM ASATNEIAAN AENTATAAQQ SAASSLQGKD
LVHKTRNSIN SLANEVSQAT DVIGDLSRHA QSISSILGTI QGIAEQTNLL ALNAAIEAAR
AGEQGRGFAV VADEVRVLSR RTQDSTQEVH TTIETLQRTT ARAVTLMESS QALAGNSVED
ANAAAKALEE ITQAVNVISD MAGQIATAAE EQTQVTGEIT QNTVAIKDVT DEITASAMAD
LAQAKALKAR ANDLNAQVAT FIL