Gene Spea_3491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3491 
Symbol 
ID5663877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4265879 
End bp4267759 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content46% 
IMG OID641238147 
Productmethyl-accepting chemotaxis sensory transducer with Cache sensor 
Protein accessionYP_001503339 
Protein GI157963305 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTCA CAATAAAGCA CAAAATTCAA CTAGCCGTAT TAATGACCAT ACTTGCCATC 
AGTGCCACGC TGGCCACTTT GTCTACTCGT CAGCTAACTC ATGATACTGA AATGGCTATT
TCAACTCGGT TTAAGCTACA AGCAGAGTCA GTGACTAACA ATATTTTCAG CTGGTTAGAG
GATAAGAAAC GCATTGTTAA AGCTAACGAA TCACGAATTA AACGCGGCCT AGACAGTGAT
AGAGAGTTAT GGTTATCGAT TAACAGCGGT GGCTTTATCG ACGTATACGC AGGTTTTGAT
ACTGGCGATA TTATCTCTGG TGATAAGGCA CAACCTTGGC CTGAAGATTA TGACCCGCTC
ACTCGGCCTT GGTATAAGCT GGCTTATAAC AGCTCAGAAA TGATTATTAC ACCGCCCTAC
GTCGATATTA CGGGCGCCGC CGTAGTGACA TTAGCTCAAC GTTTTAATGG CGCAATGAAT
GGTGTGTTAG CCGCAGACTT GAGTATTGGG TATATTACCG AGCAAATTAA TAACCTGCAG
ATCGATAATG CGGGGTTTGC TTTCTTGCTA GATGAACACA ACAAGGTCCT CGCCTATCAC
GACACTAATT ACGCTCAAAA GGATGCCAAT CGTCTAGCTC AGTCATTAAC CGCCCCCAAT
ATTGAGTCAT TACGAGATCA AGGCGAAATC ACCACGATTA AATGGCAAGA CGGCAGTGAA
AAGTTACTGC GATTAACCAA ACTGAAGGGC ACCAACTGGA CCTTAGGCCT AGTTGAGGAC
AGAGATTTAG CTTATCAAGC CATCGAAGAG CAAGTCATCA ACAAGCTAAT TGTTGTTGTC
ATACTTGCAT TTATCATCTT GATTATCGCT TCTGTCATCG TTAACCACAT GTTTAAACCT
TTGCAGCAGC TATCTAATGC GATTGAAGCT CTATCTAAAG GCGATGGCGA TCTAACTCAA
CGTTTTGCAG CAAGAAAGCA AGACGAAATA GGTCAACTAG AGAGCCACAT GAACCGCTTC
CTAGAGAGTC TACAGCTAAT GGTTAGAGCA ATTTCTAGCG ATACTGAGCT GCTAATCAAG
CAGATCAACG AATCCTCAGA CATTGCAGCA AAAGCCAGTG AAGGCGTTAA CGGCCAACAT
CAAGACGTAG ATCAAATCGC AACGGCAATC CACGAAATGT CAGCCACAGC AAGCGAGGTC
GCTAATCATG CAGAGATGAC AGCCAGCGCC GCTCAAGTAT CAACTCAAGC CTGCGTAGAA
GGTAACGAGG TGATAGTGAA AAGCAGCGAC TCGATTGAGC AGCTTTCACA GCAACTTGGT
GATGCATCGA AAGTGGTTTC GGCACTTGAA GAAAATGCCA CAGAGATCAA TCAAATCCTC
TCAACCATTC AAGCGATTGC CGAGCAAACC AACTTGCTTG CTCTTAACGC CGCCATTGAA
GCTGCACGCG CCGGTGAACA AGGTCGCGGT TTTGCTGTTG TTGCCGACGA GGTACGTGTA
CTGAGCCATC GTACTCAAGA CTCTACCGAA GAGATTCGCT CCATGATCGC CACCCTGCAG
CAAAACAGCC AGCATGCTGT GTCGTCGATG GCATCGAGTA CGAATATTGC CAAGTCTAGC
GTCGAATTTG CCAATCAAGC AAAGCACAGC CTAGAGCGGA TCACCGACTC AATCACCGAG
ATCTCTGACA TGGCAACCCA AATTGCAAGT GCAGCCGAAG AACAACGTGC AGTATCAGAA
GATATTAGCC GCAACACCCA GGCGATCAGT GATACTTCCA ATGAACTATC GCACCAAACG
CAAGAGGTCA GTGACAACGC GCAGCTGATG CTGCAAACCT CAGGTGAGTT AAGCGAACGG
GTCTCACGCT TTAAGATCTA A
 
Protein sequence
MNLTIKHKIQ LAVLMTILAI SATLATLSTR QLTHDTEMAI STRFKLQAES VTNNIFSWLE 
DKKRIVKANE SRIKRGLDSD RELWLSINSG GFIDVYAGFD TGDIISGDKA QPWPEDYDPL
TRPWYKLAYN SSEMIITPPY VDITGAAVVT LAQRFNGAMN GVLAADLSIG YITEQINNLQ
IDNAGFAFLL DEHNKVLAYH DTNYAQKDAN RLAQSLTAPN IESLRDQGEI TTIKWQDGSE
KLLRLTKLKG TNWTLGLVED RDLAYQAIEE QVINKLIVVV ILAFIILIIA SVIVNHMFKP
LQQLSNAIEA LSKGDGDLTQ RFAARKQDEI GQLESHMNRF LESLQLMVRA ISSDTELLIK
QINESSDIAA KASEGVNGQH QDVDQIATAI HEMSATASEV ANHAEMTASA AQVSTQACVE
GNEVIVKSSD SIEQLSQQLG DASKVVSALE ENATEINQIL STIQAIAEQT NLLALNAAIE
AARAGEQGRG FAVVADEVRV LSHRTQDSTE EIRSMIATLQ QNSQHAVSSM ASSTNIAKSS
VEFANQAKHS LERITDSITE ISDMATQIAS AAEEQRAVSE DISRNTQAIS DTSNELSHQT
QEVSDNAQLM LQTSGELSER VSRFKI