Gene VEA_001423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001423 
Symbol 
ID8559735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1612551 
End bp1614422 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content45% 
IMG OID646409092 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_003288571 
Protein GI262396718 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.896179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA GACATAAGGT TGTCACAGCC TCGTCATTTT TGCTGCTAAT TACCGTGTCA 
CTACTGTCGA CGCAACAAGT TATGACGATC CGCTCCCAAA CGCAGGAGCA CATTGACTCG
AGTGTGAACG AGATATTGAC CAGTGTTGGC AATACCGTGC AATCAGAAAT GAATGCTAAA
AAGGATCTCG CTCGTTCTAT TACTGAAGTT ATCGAACTTA ATCCAAGTTC ACACAACTAC
GTTCAGAACA TTCTTGAGCG ACCAACACCA AAAGCAAGCT TTCTTGCGAT TGGCTTTGGT
TATGAAAGCA ATGGCTTCGT GATTGAAAAT GACGACGGCT GGGAAGCAGG ACCAGACTAC
GATCCGCGTC AACGTCCTTG GTTCATCGCA GCTAAAAACA AAGGCGATTT GGTCGTAACA
GACCCATACG TCGATGCGTC TTCAAAAAAC GTTATCATCT CTGTTGGTAC ACCTGTAAAA
GAAAACGGCC AGTTCTTAGC TGGTATGTTT TATGACCTTG AGCTCACTAC CCTTTCTGAC
CTCGTCAACC AAGTTAATCT GTTTGACGCT GGTTACTTAT TTTTGGTCAC CGCTGATGGG
ACAACCATTG CCCACCCTCA AAGTAAGTAC AACGGTGAAA AAGTTGGTAG CTACCTGCCA
CAGGTTGATC TTACACAATC AACGCAACAC ATTGAGATCG ATGGCGATCG TTATATGATT
AACTTGACTC ACATCCCTGG CGAGAACTGG TACGTGGGTT CAGTTATTGA TGAAGCTATC
GCCTACTCTG CCGTAGGAGA GCTTCGCAAC AGCGCTATTA TTTATTCAAT CATTGCCGTG
ATTGCTTCTG TTATTGCACT GACTCTACTC ATTCGCACGC TCATGCGTCC GCTGGACACT
TTAAACAACG CGATTAAAGG TGTTGCGTCT GGGAAAGGCG ATCTTACACA GCGCCTTGAA
ACTGATACTG ACCAAGAATT CTCAGAGCTT GCTACAAACT TCAATACGTT CATGGAAAAC
TTGCAACAGC AAATTATTGA GTCGAAGAGT ATTTCTGATC AAATTTTGAA TGGCACTCAA
ATCACCGCTG AGGGTGCAAA AGATTCGGCA GATGCTATTC AAACTCAGCT ACAAGAGCTA
GAACAATTAG CCACCGCGAT GCACGAGATG TCTGTTACCG CGACTGAAGT TGCCAATAAT
GCGCAAGGCG CAGCGAGTGC AGCCAAAGAA GCTGATCAAG CAACGGTTGA GGGCTCTTCT
GTGGTCGGTG AATCGACACA AACGATCAAT ATGCTTTCCG ATAGCATTGA CCTTGCTGTC
GAAGAAGTGC AAGTGCTTGA ATCTGCAACC GCCAACATCG AAACGATTCT AAAAGTCATC
AACGATATTG CGGACCAAAC GAACTTACTC GCGTTGAATG CCGCAATTGA GGCTGCACGT
GCGGGAGAAT CTGGCCGAGG CTTCGCCGTC GTTGCTGATG AAGTTCGTAC ACTGGCGCAA
CGAACCCAAG AATCAACAAC AGAAATTCGT ACTATGATTG AGCAGCTGCA ATCTGGCGCA
TCATCTGTGG CAAATGCTAT GCATCAAAGC AAGGGTAGCG CTGTAGAAGC CGTAGAAAAA
GCAGACTTGG CAAACAACGC GCTACAACGT ATTCGTGATG CGATTCAGCG TATTTCTGAT
ATGAACTTAC AAATCGCCTC AGCGGCGGAA GAACAAAGCT TAGTTGCGGA AGAGATCAAC
AACAATACGG TGAATATTAA AGACCTATCG ACTCAAGTCG CCGAATCTGC AAATCGAACT
AACGATGCTA TGCAGGCACA GCAAGAAGAT GTACATAAAC AAGATCAAAT ATTAAACCGA
TTTACAGTCT AG
 
Protein sequence
MKFRHKVVTA SSFLLLITVS LLSTQQVMTI RSQTQEHIDS SVNEILTSVG NTVQSEMNAK 
KDLARSITEV IELNPSSHNY VQNILERPTP KASFLAIGFG YESNGFVIEN DDGWEAGPDY
DPRQRPWFIA AKNKGDLVVT DPYVDASSKN VIISVGTPVK ENGQFLAGMF YDLELTTLSD
LVNQVNLFDA GYLFLVTADG TTIAHPQSKY NGEKVGSYLP QVDLTQSTQH IEIDGDRYMI
NLTHIPGENW YVGSVIDEAI AYSAVGELRN SAIIYSIIAV IASVIALTLL IRTLMRPLDT
LNNAIKGVAS GKGDLTQRLE TDTDQEFSEL ATNFNTFMEN LQQQIIESKS ISDQILNGTQ
ITAEGAKDSA DAIQTQLQEL EQLATAMHEM SVTATEVANN AQGAASAAKE ADQATVEGSS
VVGESTQTIN MLSDSIDLAV EEVQVLESAT ANIETILKVI NDIADQTNLL ALNAAIEAAR
AGESGRGFAV VADEVRTLAQ RTQESTTEIR TMIEQLQSGA SSVANAMHQS KGSAVEAVEK
ADLANNALQR IRDAIQRISD MNLQIASAAE EQSLVAEEIN NNTVNIKDLS TQVAESANRT
NDAMQAQQED VHKQDQILNR FTV