Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001423 |
Symbol | |
ID | 8559735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 1612551 |
End bp | 1614422 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646409092 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_003288571 |
Protein GI | 262396718 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.896179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA GACATAAGGT TGTCACAGCC TCGTCATTTT TGCTGCTAAT TACCGTGTCA CTACTGTCGA CGCAACAAGT TATGACGATC CGCTCCCAAA CGCAGGAGCA CATTGACTCG AGTGTGAACG AGATATTGAC CAGTGTTGGC AATACCGTGC AATCAGAAAT GAATGCTAAA AAGGATCTCG CTCGTTCTAT TACTGAAGTT ATCGAACTTA ATCCAAGTTC ACACAACTAC GTTCAGAACA TTCTTGAGCG ACCAACACCA AAAGCAAGCT TTCTTGCGAT TGGCTTTGGT TATGAAAGCA ATGGCTTCGT GATTGAAAAT GACGACGGCT GGGAAGCAGG ACCAGACTAC GATCCGCGTC AACGTCCTTG GTTCATCGCA GCTAAAAACA AAGGCGATTT GGTCGTAACA GACCCATACG TCGATGCGTC TTCAAAAAAC GTTATCATCT CTGTTGGTAC ACCTGTAAAA GAAAACGGCC AGTTCTTAGC TGGTATGTTT TATGACCTTG AGCTCACTAC CCTTTCTGAC CTCGTCAACC AAGTTAATCT GTTTGACGCT GGTTACTTAT TTTTGGTCAC CGCTGATGGG ACAACCATTG CCCACCCTCA AAGTAAGTAC AACGGTGAAA AAGTTGGTAG CTACCTGCCA CAGGTTGATC TTACACAATC AACGCAACAC ATTGAGATCG ATGGCGATCG TTATATGATT AACTTGACTC ACATCCCTGG CGAGAACTGG TACGTGGGTT CAGTTATTGA TGAAGCTATC GCCTACTCTG CCGTAGGAGA GCTTCGCAAC AGCGCTATTA TTTATTCAAT CATTGCCGTG ATTGCTTCTG TTATTGCACT GACTCTACTC ATTCGCACGC TCATGCGTCC GCTGGACACT TTAAACAACG CGATTAAAGG TGTTGCGTCT GGGAAAGGCG ATCTTACACA GCGCCTTGAA ACTGATACTG ACCAAGAATT CTCAGAGCTT GCTACAAACT TCAATACGTT CATGGAAAAC TTGCAACAGC AAATTATTGA GTCGAAGAGT ATTTCTGATC AAATTTTGAA TGGCACTCAA ATCACCGCTG AGGGTGCAAA AGATTCGGCA GATGCTATTC AAACTCAGCT ACAAGAGCTA GAACAATTAG CCACCGCGAT GCACGAGATG TCTGTTACCG CGACTGAAGT TGCCAATAAT GCGCAAGGCG CAGCGAGTGC AGCCAAAGAA GCTGATCAAG CAACGGTTGA GGGCTCTTCT GTGGTCGGTG AATCGACACA AACGATCAAT ATGCTTTCCG ATAGCATTGA CCTTGCTGTC GAAGAAGTGC AAGTGCTTGA ATCTGCAACC GCCAACATCG AAACGATTCT AAAAGTCATC AACGATATTG CGGACCAAAC GAACTTACTC GCGTTGAATG CCGCAATTGA GGCTGCACGT GCGGGAGAAT CTGGCCGAGG CTTCGCCGTC GTTGCTGATG AAGTTCGTAC ACTGGCGCAA CGAACCCAAG AATCAACAAC AGAAATTCGT ACTATGATTG AGCAGCTGCA ATCTGGCGCA TCATCTGTGG CAAATGCTAT GCATCAAAGC AAGGGTAGCG CTGTAGAAGC CGTAGAAAAA GCAGACTTGG CAAACAACGC GCTACAACGT ATTCGTGATG CGATTCAGCG TATTTCTGAT ATGAACTTAC AAATCGCCTC AGCGGCGGAA GAACAAAGCT TAGTTGCGGA AGAGATCAAC AACAATACGG TGAATATTAA AGACCTATCG ACTCAAGTCG CCGAATCTGC AAATCGAACT AACGATGCTA TGCAGGCACA GCAAGAAGAT GTACATAAAC AAGATCAAAT ATTAAACCGA TTTACAGTCT AG
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Protein sequence | MKFRHKVVTA SSFLLLITVS LLSTQQVMTI RSQTQEHIDS SVNEILTSVG NTVQSEMNAK KDLARSITEV IELNPSSHNY VQNILERPTP KASFLAIGFG YESNGFVIEN DDGWEAGPDY DPRQRPWFIA AKNKGDLVVT DPYVDASSKN VIISVGTPVK ENGQFLAGMF YDLELTTLSD LVNQVNLFDA GYLFLVTADG TTIAHPQSKY NGEKVGSYLP QVDLTQSTQH IEIDGDRYMI NLTHIPGENW YVGSVIDEAI AYSAVGELRN SAIIYSIIAV IASVIALTLL IRTLMRPLDT LNNAIKGVAS GKGDLTQRLE TDTDQEFSEL ATNFNTFMEN LQQQIIESKS ISDQILNGTQ ITAEGAKDSA DAIQTQLQEL EQLATAMHEM SVTATEVANN AQGAASAAKE ADQATVEGSS VVGESTQTIN MLSDSIDLAV EEVQVLESAT ANIETILKVI NDIADQTNLL ALNAAIEAAR AGESGRGFAV VADEVRTLAQ RTQESTTEIR TMIEQLQSGA SSVANAMHQS KGSAVEAVEK ADLANNALQR IRDAIQRISD MNLQIASAAE EQSLVAEEIN NNTVNIKDLS TQVAESANRT NDAMQAQQED VHKQDQILNR FTV
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