Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3492 |
Symbol | |
ID | 5663878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4268076 |
End bp | 4269956 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641238148 |
Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
Protein accession | YP_001503340 |
Protein GI | 157963306 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTTA CAATTAAGCA AAAGATACAG CTCGCTGTCT TGCTGGTTAT CGTGACGATA ACAGCAGTTC TAGCCCTAAT CTCAACTAAG CAACTAAACC AACATACCGA ACACGCTATC GCGACTCGCT TTGCACTTCA AGGTGAAGCA GTCAGTAACA ATATTTTTAG CTGGTTAGCA GACAAAAAGC GCATTATCAG CGCCAATGAA GCTCCACTTC AAAATGGCTT AGATAATGCC AAGGAACTCG AACTCAGCAT CCGGGCTGGC GGCTTTATCA ACCTGTATAT GGGCTTAGAT AATGGCAAAG TGATCTCTGG TGACAAGAGC GTTGAGATCC CTGCAGATTT TGACGGTAGA ACCCGGCCTT GGTACCGAGA TGCATTCAAT AGTCATGAGA TCATCACCAC CTTGCCTTAT GTGGATATCT CTGGCGATAC CGTAGTGACC TTAGCTAAGC GTTTTAACGG GCAGTTTTCT GGTGTATTAG CGGCAGATTT GAGCATTAGC TATATCACGC AGCAGATCGA CAACCTAAAT ATTGCCAACT CAGGTTTTGC TTTCCTACTC GATGAAAACA ATAACATCCT AGCCTTTAGA GATAGAAGCT ATGCTCAGCA AGACGCCAAG CGTTTATCAC AACAACTGAC TCAGTCAAAT ATTCAAACCC TGCGTAATAG CGGCGAAATT AGCACCATAG AGTGGCAAGA TGGTCAGGAT AAGCTAATCA GTTTAACGCA GCTTAAGGGG ACAAACTGGA CCTTAGGCTT AGTCGAAGAC AAGAATCTTG CCTATCAGGC GATAGAACAG CAGATCCAAC AGTCTCTATT TGCAGTAACA ATATTGGCCA TCATCATATT GCTGATTGCT TCTGTCGCCG TAAACTATCT GTTTAAGCCA CTGCAACAAC TTAGCCTTGC TATTGAAGCC CTATCGAAAG GCGATGGTGA CTTAACCCAA CGCTTTGCGG CAAATAGAGA AGATGAAATT GGTCAGTTAG AACGCCATAT GAACCGCTTC CTAGCGAGTC TACAGCAGAT GATTAAGGCG ATATCAAATG ATACCGAGCA GTTGATCAAG CAGATCCATG AGTCTTCAGA CATAGCAGCC AAAGCCAGTG ACGGCGTGAA TGGCCAGCAC CAAGATGTGG ATCAGATAGC CACTGCTATC CATGAGATGT CGGCAACCGC GAGCGAAGTG GCCAATCATG CCGAAATGAC TGCCAATGCT GCGCAAGTAT CAACCCAAGC CTGTATCGAA GGCAATGACG TTATTATTAA GAGCAGCGAC TCTATCGAGC TGTTGTCAGA GCAACTTGGT GATGCCTCGA AAGTGGTTTC TGCACTCGAA GAGAACGCCA CCGAGATCAA TAAGATCTTA TCGACGATTC AAGCCATTGC CGAGCAGACA AACTTACTGG CACTTAACGC AGCTATTGAA GCTGCCCGAG CCGGTGAGCA GGGACGAGGC TTTGCCGTAG TGGCCGATGA AGTACGAGTG CTGAGTCATC GTACTCAAGA CTCTACCGAA GAGATCCGTG CGATGATCAC CACCTTGCAG CAAAATAGCC AACAAGCGGT AGCATCTATG GCATCGAGTA CTGATATTGC CCACAGCAGT GTCGAGTTCG CTAACCAAGC TAAGCAGAGC TTAGAGAGTA TTACCGATTC AATCACCGAG ATCTCCGATA TGGCGACCCA AATCGCCAGT GCAGCAGAGG AGCAGCGCGC CGTTTCAGAG GACATTAGCC GTAATACTCA AGCGATTAGC GATACATCCC ATCAACTGTC ATCTCAAACC CAAGAGGTGA CCGACAATGC GGTGCAGATG CTACAGACCT CGAGTAGCTT AAGTGAACGG GTTTCTCGTT TTAAGATCTA A
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Protein sequence | MNLTIKQKIQ LAVLLVIVTI TAVLALISTK QLNQHTEHAI ATRFALQGEA VSNNIFSWLA DKKRIISANE APLQNGLDNA KELELSIRAG GFINLYMGLD NGKVISGDKS VEIPADFDGR TRPWYRDAFN SHEIITTLPY VDISGDTVVT LAKRFNGQFS GVLAADLSIS YITQQIDNLN IANSGFAFLL DENNNILAFR DRSYAQQDAK RLSQQLTQSN IQTLRNSGEI STIEWQDGQD KLISLTQLKG TNWTLGLVED KNLAYQAIEQ QIQQSLFAVT ILAIIILLIA SVAVNYLFKP LQQLSLAIEA LSKGDGDLTQ RFAANREDEI GQLERHMNRF LASLQQMIKA ISNDTEQLIK QIHESSDIAA KASDGVNGQH QDVDQIATAI HEMSATASEV ANHAEMTANA AQVSTQACIE GNDVIIKSSD SIELLSEQLG DASKVVSALE ENATEINKIL STIQAIAEQT NLLALNAAIE AARAGEQGRG FAVVADEVRV LSHRTQDSTE EIRAMITTLQ QNSQQAVASM ASSTDIAHSS VEFANQAKQS LESITDSITE ISDMATQIAS AAEEQRAVSE DISRNTQAIS DTSHQLSSQT QEVTDNAVQM LQTSSSLSER VSRFKI
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