More than 300 homologs were found in PanDaTox collection
for query gene PA14_56000 on replicon NC_008463
Organism: Pseudomonas aeruginosa UCBPP-PA14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009656  PSPA7_4877  chemotactic transducer PctB  82.99 
 
 
629 aa  1077    Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  67.73 
 
 
624 aa  825    Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  62.74 
 
 
643 aa  801    Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  62.74 
 
 
628 aa  803    Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  75.47 
 
 
632 aa  956    Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  64.7 
 
 
626 aa  790    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  61.27 
 
 
629 aa  763    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  64.7 
 
 
626 aa  792    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  61.59 
 
 
629 aa  751    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  63.43 
 
 
629 aa  782    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  65.81 
 
 
626 aa  836    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  62.54 
 
 
630 aa  785    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  70.59 
 
 
629 aa  880    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  75.99 
 
 
625 aa  973    Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.46 
 
 
626 aa  777    Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  67.09 
 
 
624 aa  820    Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  60.95 
 
 
630 aa  758    Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  68.36 
 
 
624 aa  834    Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.06 
 
 
628 aa  808    Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  95.71 
 
 
629 aa  1208    Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  67.57 
 
 
624 aa  825    Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  75.95 
 
 
632 aa  963    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  100 
 
 
629 aa  1282    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  82.99 
 
 
629 aa  1080    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  36.04 
 
 
627 aa  389  1e-107  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  35.19 
 
 
626 aa  371  1e-101  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  35.57 
 
 
623 aa  362  1e-98  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  35.03 
 
 
622 aa  358  9.999999999999999e-98  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_009636  Smed_0489  methyl-accepting chemotaxis sensory transducer  34 
 
 
698 aa  349  7e-95  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.000832175  normal 
 
 
-
 
NC_011989  Avi_0988  methyl-accepting chemotaxis protein  34.1 
 
 
695 aa  347  3e-94  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1741  methyl-accepting chemotaxis protein  35.96 
 
 
623 aa  347  3e-94  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  33.44 
 
 
623 aa  345  2e-93  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  34.24 
 
 
622 aa  344  2.9999999999999997e-93  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  34.28 
 
 
652 aa  340  4e-92  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  34.03 
 
 
622 aa  340  5e-92  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.26 
 
 
630 aa  330  6e-89  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  34.1 
 
 
630 aa  328  2.0000000000000001e-88  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  34.12 
 
 
630 aa  327  4.0000000000000003e-88  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  34.11 
 
 
630 aa  326  6e-88  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  33.95 
 
 
630 aa  326  9e-88  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  33.81 
 
 
630 aa  324  4e-87  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  33.81 
 
 
630 aa  323  5e-87  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  33.33 
 
 
630 aa  321  1.9999999999999998e-86  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  34.47 
 
 
630 aa  315  9.999999999999999e-85  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4557  methyl-accepting chemotaxis protein  33.18 
 
 
623 aa  312  1e-83  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_3950  methyl-accepting chemotaxis sensory transducer  33.8 
 
 
623 aa  312  1e-83  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3825  methyl-accepting chemotaxis sensory transducer  33.85 
 
 
623 aa  312  1e-83  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  34.78 
 
 
636 aa  310  5e-83  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  33.88 
 
 
631 aa  310  5e-83  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  34.28 
 
 
623 aa  310  5e-83  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  37.74 
 
 
638 aa  310  6.999999999999999e-83  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009665  Shew185_4141  methyl-accepting chemotaxis sensory transducer  32.97 
 
 
623 aa  308  2.0000000000000002e-82  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.12 
 
 
623 aa  306  6e-82  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_011663  Sbal223_0194  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.81 
 
 
623 aa  306  7e-82  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_4274  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.81 
 
 
623 aa  306  7e-82  Shewanella baltica OS195  Bacteria  normal  normal  0.179842 
 
 
-
 
NC_008321  Shewmr4_3752  methyl-accepting chemotaxis sensory transducer  33.49 
 
 
623 aa  306  1.0000000000000001e-81  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0193  methyl-accepting chemotaxis sensory transducer  32.97 
 
 
623 aa  305  2.0000000000000002e-81  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.18 
 
 
623 aa  304  3.0000000000000004e-81  Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  32.45 
 
 
639 aa  304  3.0000000000000004e-81  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0323  methyl-accepting chemotaxis sensory transducer  32.65 
 
 
623 aa  303  7.000000000000001e-81  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  35.38 
 
 
633 aa  302  2e-80  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.36 
 
 
632 aa  298  2e-79  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  37.48 
 
 
638 aa  298  2e-79  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  36.96 
 
 
638 aa  297  3e-79  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  35.44 
 
 
627 aa  296  6e-79  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  32.09 
 
 
630 aa  292  2e-77  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  37.84 
 
 
636 aa  290  5.0000000000000004e-77  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  33.83 
 
 
627 aa  285  2.0000000000000002e-75  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  39.66 
 
 
636 aa  282  1e-74  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  33.74 
 
 
642 aa  278  2e-73  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  31.4 
 
 
628 aa  278  2e-73  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  32.92 
 
 
624 aa  278  2e-73  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  31.61 
 
 
632 aa  276  8e-73  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  37.79 
 
 
639 aa  273  5.000000000000001e-72  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.72 
 
 
626 aa  272  1e-71  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  32.51 
 
 
626 aa  272  1e-71  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  35.31 
 
 
638 aa  271  2.9999999999999997e-71  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  30.77 
 
 
628 aa  270  5.9999999999999995e-71  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  37.67 
 
 
638 aa  270  7e-71  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  37.67 
 
 
638 aa  270  7e-71  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.98 
 
 
626 aa  270  8e-71  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  37.48 
 
 
638 aa  269  1e-70  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  37.88 
 
 
638 aa  267  4e-70  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  37.31 
 
 
638 aa  267  4e-70  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  37.31 
 
 
638 aa  267  4e-70  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  37.31 
 
 
638 aa  267  4e-70  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  37.31 
 
 
641 aa  267  5e-70  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  33.18 
 
 
645 aa  266  1e-69  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  33.33 
 
 
645 aa  265  3e-69  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2088  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.77 
 
 
617 aa  262  2e-68  Acidovorax ebreus TPSY  Bacteria  normal  0.258516  n/a   
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  35.87 
 
 
638 aa  261  3e-68  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1003  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.44 
 
 
596 aa  260  4e-68  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  33.83 
 
 
646 aa  260  5.0000000000000005e-68  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_009831  Ssed_4216  methyl-accepting chemotaxis sensory transducer  31.26 
 
 
647 aa  259  9e-68  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  33.58 
 
 
648 aa  259  9e-68  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  32.65 
 
 
646 aa  258  2e-67  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.94 
 
 
627 aa  258  2e-67  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  33.44 
 
 
645 aa  258  2e-67  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_009457  VC0395_A0365  accessory colonization factor AcfB  30.76 
 
 
626 aa  256  7e-67  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3307  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.28 
 
 
596 aa  255  2.0000000000000002e-66  Pectobacterium wasabiae WPP163  Bacteria  normal  0.298951  n/a   
 
 
-
 
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