More than 300 homologs were found in PanDaTox collection
for query gene PputW619_0425 on replicon NC_010501
Organism: Pseudomonas putida W619



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  61.59 
 
 
624 aa  721    Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  61.59 
 
 
624 aa  721    Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  58.66 
 
 
643 aa  717    Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  58.51 
 
 
628 aa  717    Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  61.59 
 
 
629 aa  781    Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  58.66 
 
 
628 aa  719    Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  56.87 
 
 
626 aa  676    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  66.88 
 
 
629 aa  845    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  56.46 
 
 
626 aa  677    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  66.56 
 
 
629 aa  825    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  61.43 
 
 
629 aa  738    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  56.96 
 
 
626 aa  707    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  75.71 
 
 
630 aa  972    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  63.65 
 
 
629 aa  779    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  62.34 
 
 
632 aa  796    Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  60.54 
 
 
629 aa  743    Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  62.09 
 
 
625 aa  771    Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  61.11 
 
 
624 aa  720    Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  61.43 
 
 
624 aa  719    Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  62.66 
 
 
632 aa  802    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  60.95 
 
 
629 aa  753    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  61.9 
 
 
629 aa  782    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  100 
 
 
630 aa  1274    Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  57.58 
 
 
626 aa  687    Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  34.81 
 
 
626 aa  374  1e-102  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  33.91 
 
 
627 aa  368  1e-100  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  34.67 
 
 
623 aa  346  7e-94  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  36.49 
 
 
630 aa  345  1e-93  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
622 aa  340  2.9999999999999998e-92  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  36.02 
 
 
630 aa  339  7e-92  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  36.02 
 
 
630 aa  339  9e-92  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.18 
 
 
630 aa  337  5e-91  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  32.86 
 
 
623 aa  337  5e-91  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  34.18 
 
 
630 aa  336  7.999999999999999e-91  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  34.18 
 
 
630 aa  336  1e-90  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  34.18 
 
 
630 aa  335  2e-90  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_009457  VC0395_A1741  methyl-accepting chemotaxis protein  34.91 
 
 
623 aa  334  4e-90  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  34.5 
 
 
630 aa  332  1e-89  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  34.34 
 
 
622 aa  328  2.0000000000000001e-88  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  32.12 
 
 
622 aa  328  2.0000000000000001e-88  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  31.87 
 
 
652 aa  324  3e-87  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  32.82 
 
 
630 aa  309  8e-83  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  35.71 
 
 
639 aa  309  1.0000000000000001e-82  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  33.49 
 
 
630 aa  305  2.0000000000000002e-81  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  36.19 
 
 
638 aa  300  5e-80  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009636  Smed_0489  methyl-accepting chemotaxis sensory transducer  31.65 
 
 
698 aa  298  1e-79  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.000832175  normal 
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.8 
 
 
623 aa  298  2e-79  Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  35.15 
 
 
626 aa  298  2e-79  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  36.5 
 
 
638 aa  298  3e-79  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  32.32 
 
 
632 aa  297  4e-79  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  39.32 
 
 
636 aa  293  5e-78  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  36 
 
 
636 aa  293  9e-78  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  34.15 
 
 
627 aa  292  1e-77  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  35.2 
 
 
639 aa  292  1e-77  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
638 aa  289  8e-77  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_008322  Shewmr7_3825  methyl-accepting chemotaxis sensory transducer  32.17 
 
 
623 aa  290  8e-77  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  33.74 
 
 
627 aa  289  9e-77  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_011989  Avi_0988  methyl-accepting chemotaxis protein  29.86 
 
 
695 aa  289  1e-76  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  37.02 
 
 
642 aa  289  1e-76  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  37.02 
 
 
638 aa  288  1e-76  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  36.84 
 
 
638 aa  288  2.9999999999999996e-76  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  33.49 
 
 
633 aa  286  5.999999999999999e-76  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  39.22 
 
 
638 aa  286  7e-76  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_004347  SO_4557  methyl-accepting chemotaxis protein  31.75 
 
 
623 aa  286  9e-76  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_0193  methyl-accepting chemotaxis sensory transducer  32.86 
 
 
623 aa  285  2.0000000000000002e-75  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  32.86 
 
 
623 aa  285  2.0000000000000002e-75  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4274  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.7 
 
 
623 aa  285  2.0000000000000002e-75  Shewanella baltica OS195  Bacteria  normal  normal  0.179842 
 
 
-
 
NC_009665  Shew185_4141  methyl-accepting chemotaxis sensory transducer  32.7 
 
 
623 aa  285  2.0000000000000002e-75  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  35.74 
 
 
638 aa  285  2.0000000000000002e-75  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.28 
 
 
626 aa  285  2.0000000000000002e-75  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0194  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.7 
 
 
623 aa  285  2.0000000000000002e-75  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.72 
 
 
623 aa  285  2.0000000000000002e-75  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_008321  Shewmr4_3752  methyl-accepting chemotaxis sensory transducer  31.7 
 
 
623 aa  283  6.000000000000001e-75  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3950  methyl-accepting chemotaxis sensory transducer  31.7 
 
 
623 aa  283  8.000000000000001e-75  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  32.77 
 
 
631 aa  283  9e-75  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  33.84 
 
 
638 aa  282  2e-74  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.13 
 
 
632 aa  279  1e-73  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  33.15 
 
 
636 aa  278  2e-73  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  35.88 
 
 
641 aa  277  5e-73  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  35.7 
 
 
638 aa  277  5e-73  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  35.7 
 
 
638 aa  277  5e-73  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0323  methyl-accepting chemotaxis sensory transducer  31.54 
 
 
623 aa  276  6e-73  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  35.7 
 
 
638 aa  276  6e-73  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  35 
 
 
650 aa  276  8e-73  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.68 
 
 
627 aa  273  5.000000000000001e-72  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  30.54 
 
 
628 aa  270  7e-71  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2088  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.97 
 
 
617 aa  268  2e-70  Acidovorax ebreus TPSY  Bacteria  normal  0.258516  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  42.14 
 
 
559 aa  266  1e-69  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  30.37 
 
 
628 aa  264  4e-69  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  33.09 
 
 
638 aa  263  8.999999999999999e-69  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.15 
 
 
626 aa  263  1e-68  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  31.23 
 
 
624 aa  260  4e-68  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  28.82 
 
 
601 aa  257  4e-67  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  36.19 
 
 
643 aa  256  1.0000000000000001e-66  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_010086  Bmul_4247  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.91 
 
 
599 aa  254  3e-66  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1642  methyl-accepting chemotaxis sensory transducer  29.73 
 
 
599 aa  253  7e-66  Burkholderia sp. 383  Bacteria  normal  normal  0.255489 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  31.99 
 
 
645 aa  253  8.000000000000001e-66  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_010506  Swoo_3605  methyl-accepting chemotaxis sensory transducer  30.04 
 
 
666 aa  253  1e-65  Shewanella woodyi ATCC 51908  Bacteria  normal  0.644417  normal 
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  30.89 
 
 
628 aa  251  2e-65  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  31.75 
 
 
645 aa  250  6e-65  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
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