More than 300 homologs were found in PanDaTox collection
for query gene Shewana3_0272 on replicon NC_008577
Organism: Shewanella sp. ANA-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  93.42 
 
 
638 aa  1146    Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  96.24 
 
 
642 aa  1181    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  77.12 
 
 
636 aa  922    Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  79.87 
 
 
639 aa  1011    Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  93.42 
 
 
638 aa  1146    Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  99.22 
 
 
638 aa  1280    Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  77.9 
 
 
638 aa  1003    Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  81.5 
 
 
638 aa  1035    Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  99.53 
 
 
638 aa  1284    Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  93.26 
 
 
638 aa  1141    Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  79.56 
 
 
636 aa  1019    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  93.42 
 
 
638 aa  1146    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  93.42 
 
 
641 aa  1147    Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  79.15 
 
 
638 aa  999    Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  100 
 
 
638 aa  1287    Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  53.69 
 
 
638 aa  639    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  51.96 
 
 
638 aa  620  1e-176  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  52.9 
 
 
650 aa  613  9.999999999999999e-175  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011138  MADE_00464  methyl-accepting chemotaxis protein  43.69 
 
 
636 aa  534  1e-150  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0604  methyl-accepting chemotaxis sensory transducer  42.1 
 
 
641 aa  481  1e-134  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.471742  n/a   
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  36.08 
 
 
641 aa  379  1e-104  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  37.69 
 
 
645 aa  358  9.999999999999999e-98  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  37.54 
 
 
645 aa  358  1.9999999999999998e-97  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  34.37 
 
 
640 aa  356  8.999999999999999e-97  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  34.01 
 
 
640 aa  355  1e-96  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  36.17 
 
 
645 aa  353  4e-96  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
645 aa  352  1e-95  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  35.65 
 
 
643 aa  341  2e-92  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  36.31 
 
 
645 aa  341  2.9999999999999998e-92  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  36.25 
 
 
629 aa  313  3.9999999999999997e-84  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  34.76 
 
 
632 aa  311  2.9999999999999997e-83  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  42.98 
 
 
548 aa  308  2.0000000000000002e-82  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.84 
 
 
630 aa  307  5.0000000000000004e-82  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  34.36 
 
 
632 aa  304  3.0000000000000004e-81  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  37.35 
 
 
626 aa  303  9e-81  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  38.28 
 
 
629 aa  301  3e-80  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  36.77 
 
 
626 aa  300  7e-80  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  37.57 
 
 
629 aa  300  8e-80  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  34.15 
 
 
628 aa  296  6e-79  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.1 
 
 
628 aa  296  9e-79  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  34.15 
 
 
643 aa  295  1e-78  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.91 
 
 
626 aa  294  4e-78  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  36.44 
 
 
629 aa  293  5e-78  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1396  methyl-accepting chemotaxis sensory transducer  51.94 
 
 
548 aa  293  6e-78  Shewanella putrefaciens CN-32  Bacteria  normal  0.664947  n/a   
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  37.65 
 
 
625 aa  292  1e-77  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_009456  VC0395_1007  hemolysin secretion protein HylB  49 
 
 
548 aa  292  1e-77  Vibrio cholerae O395  Bacteria  normal  0.702356  n/a   
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  39.07 
 
 
629 aa  290  7e-77  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.41 
 
 
624 aa  287  4e-76  Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  37.3 
 
 
630 aa  286  5.999999999999999e-76  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  33.89 
 
 
626 aa  284  5.000000000000001e-75  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_007954  Sden_2239  chemotaxis sensory transducer  29.27 
 
 
648 aa  283  8.000000000000001e-75  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  38.32 
 
 
629 aa  282  1e-74  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  38.63 
 
 
629 aa  282  1e-74  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.35 
 
 
624 aa  281  3e-74  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  39.35 
 
 
624 aa  279  1e-73  Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  37.95 
 
 
629 aa  279  1e-73  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  39.7 
 
 
624 aa  278  2e-73  Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  33.39 
 
 
631 aa  275  1.0000000000000001e-72  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  34.82 
 
 
623 aa  273  6e-72  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  37.23 
 
 
558 aa  273  7e-72  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  48.96 
 
 
637 aa  272  1e-71  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  32.4 
 
 
623 aa  271  2.9999999999999997e-71  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  34.28 
 
 
630 aa  270  5.9999999999999995e-71  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.76 
 
 
630 aa  269  8.999999999999999e-71  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  35.3 
 
 
630 aa  269  1e-70  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  33.28 
 
 
630 aa  269  1e-70  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_013457  VEA_001368  methyl-accepting chemotaxis protein  47.56 
 
 
519 aa  268  2e-70  Vibrio sp. Ex25  Bacteria  normal  0.237865  n/a   
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  32.6 
 
 
630 aa  269  2e-70  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  34.74 
 
 
630 aa  267  4e-70  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  36.73 
 
 
630 aa  265  3e-69  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  43.38 
 
 
637 aa  264  3e-69  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  36.52 
 
 
630 aa  262  1e-68  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  40 
 
 
712 aa  261  2e-68  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  33.13 
 
 
564 aa  261  3e-68  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  46.69 
 
 
634 aa  261  3e-68  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  48.04 
 
 
636 aa  260  5.0000000000000005e-68  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_002947  PP_0584  methyl-accepting chemotaxis transducer  36.15 
 
 
647 aa  260  7e-68  Pseudomonas putida KT2440  Bacteria  normal  0.77697  normal  0.644217 
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  35.76 
 
 
648 aa  259  7e-68  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  40 
 
 
712 aa  260  7e-68  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  43.24 
 
 
638 aa  259  1e-67  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009512  Pput_0623  methyl-accepting chemotaxis sensory transducer  35.94 
 
 
647 aa  258  2e-67  Pseudomonas putida F1  Bacteria  normal  0.494937  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  46.45 
 
 
634 aa  257  4e-67  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  45.74 
 
 
634 aa  256  6e-67  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  43.41 
 
 
716 aa  256  1.0000000000000001e-66  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009654  Mmwyl1_0130  methyl-accepting chemotaxis sensory transducer  34.12 
 
 
671 aa  255  2.0000000000000002e-66  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4580  methyl-accepting chemotaxis sensory transducer  36.7 
 
 
648 aa  254  2.0000000000000002e-66  Pseudomonas putida W619  Bacteria  normal  normal  0.0108713 
 
 
-
 
NC_007953  Bxe_C1067  methyl-accepting chemotaxis sensory transducer  30.03 
 
 
634 aa  254  4.0000000000000004e-66  Burkholderia xenovorans LB400  Bacteria  normal  0.318926  normal 
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  34.28 
 
 
630 aa  254  5.000000000000001e-66  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  36.54 
 
 
559 aa  253  9.000000000000001e-66  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  35.94 
 
 
712 aa  252  1e-65  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  31.78 
 
 
630 aa  252  2e-65  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  43.71 
 
 
568 aa  251  3e-65  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  35.34 
 
 
738 aa  251  3e-65  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  32.8 
 
 
639 aa  251  3e-65  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2116  methyl-accepting chemotaxis sensory transducer  38.52 
 
 
545 aa  251  4e-65  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  34.67 
 
 
633 aa  250  5e-65  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  43.18 
 
 
674 aa  250  5e-65  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_004347  SO_2240  methyl-accepting chemotaxis protein  35.94 
 
 
545 aa  249  1e-64  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010322  PputGB1_0629  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.94 
 
 
647 aa  248  2e-64  Pseudomonas putida GB-1  Bacteria  normal  0.624074  hitchhiker  0.000681907 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  38.7 
 
 
548 aa  248  2e-64  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
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