More than 300 homologs were found in PanDaTox collection
for query gene Sputcn32_1396 on replicon NC_009438
Organism: Shewanella putrefaciens CN-32



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  93.43 
 
 
548 aa  1041    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1396  methyl-accepting chemotaxis sensory transducer  100 
 
 
548 aa  1102    Shewanella putrefaciens CN-32  Bacteria  normal  0.664947  n/a   
 
 
-
 
NC_009456  VC0395_1007  hemolysin secretion protein HylB  52.37 
 
 
548 aa  528  1e-148  Vibrio cholerae O395  Bacteria  normal  0.702356  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  45.71 
 
 
638 aa  292  1e-77  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  44.76 
 
 
638 aa  290  4e-77  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  47.44 
 
 
638 aa  287  2.9999999999999996e-76  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  51.61 
 
 
639 aa  285  2.0000000000000002e-75  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  44.79 
 
 
636 aa  283  6.000000000000001e-75  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  49 
 
 
636 aa  275  2.0000000000000002e-72  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  44.96 
 
 
638 aa  270  5e-71  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  45.73 
 
 
638 aa  268  1e-70  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  45.73 
 
 
638 aa  269  1e-70  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  47.61 
 
 
638 aa  265  1e-69  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  46.61 
 
 
642 aa  265  2e-69  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  46.35 
 
 
638 aa  264  3e-69  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  46.35 
 
 
641 aa  264  4e-69  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  46.35 
 
 
638 aa  263  4e-69  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  46.35 
 
 
638 aa  263  4e-69  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  46.35 
 
 
638 aa  264  4e-69  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  49.35 
 
 
650 aa  253  5.000000000000001e-66  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  44.7 
 
 
638 aa  246  6e-64  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  39.2 
 
 
638 aa  234  4.0000000000000004e-60  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  43.23 
 
 
545 aa  233  7.000000000000001e-60  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
773 aa  231  2e-59  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  31.84 
 
 
573 aa  228  2e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  38.84 
 
 
712 aa  225  2e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  38.57 
 
 
712 aa  224  3e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  29.33 
 
 
543 aa  224  4e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  43.49 
 
 
637 aa  224  4e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  40.53 
 
 
716 aa  221  1.9999999999999999e-56  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009092  Shew_0922  methyl-accepting chemotaxis sensory transducer  34.68 
 
 
572 aa  221  3.9999999999999997e-56  Shewanella loihica PV-4  Bacteria  normal  normal  0.981358 
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
605 aa  220  5e-56  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_011138  MADE_00464  methyl-accepting chemotaxis protein  40.67 
 
 
636 aa  220  5e-56  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  38.7 
 
 
645 aa  220  6e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  40.79 
 
 
559 aa  219  1e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2593  methyl-accepting chemotaxis sensory transducer  31.74 
 
 
540 aa  219  1e-55  Pseudomonas putida W619  Bacteria  normal  normal  0.591477 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  38.2 
 
 
674 aa  218  2e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
552 aa  217  4e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  37.64 
 
 
533 aa  215  9.999999999999999e-55  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  39.44 
 
 
548 aa  215  1.9999999999999998e-54  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  33.21 
 
 
572 aa  214  3.9999999999999995e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  38.81 
 
 
713 aa  214  3.9999999999999995e-54  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  35.48 
 
 
573 aa  214  3.9999999999999995e-54  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01731  Methyl-accepting chemotaxis protein  35.12 
 
 
539 aa  213  4.9999999999999996e-54  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  35.54 
 
 
541 aa  213  4.9999999999999996e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  39.72 
 
 
548 aa  212  2e-53  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  37.97 
 
 
637 aa  212  2e-53  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  40.63 
 
 
636 aa  211  2e-53  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
568 aa  211  4e-53  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.32 
 
 
523 aa  210  6e-53  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  33.62 
 
 
545 aa  209  8e-53  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  41.46 
 
 
645 aa  209  8e-53  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_010506  Swoo_2617  methyl-accepting chemotaxis sensory transducer  41.49 
 
 
548 aa  209  8e-53  Shewanella woodyi ATCC 51908  Bacteria  normal  0.224982  normal  0.210295 
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  42.72 
 
 
554 aa  209  1e-52  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  40.84 
 
 
645 aa  209  1e-52  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  41.16 
 
 
645 aa  208  2e-52  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  37.95 
 
 
543 aa  208  2e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  41.31 
 
 
548 aa  208  2e-52  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  41.61 
 
 
645 aa  207  3e-52  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  37.64 
 
 
541 aa  207  3e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  41.69 
 
 
544 aa  207  4e-52  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  38.7 
 
 
541 aa  207  4e-52  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  38.23 
 
 
568 aa  207  5e-52  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  34.87 
 
 
596 aa  207  5e-52  Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_008700  Sama_1713  putative methyl-accepting chemotaxis sensory transducer  35.75 
 
 
666 aa  206  8e-52  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000425798  normal  0.0665929 
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  40.06 
 
 
641 aa  205  2e-51  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  38.55 
 
 
536 aa  204  2e-51  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  37.05 
 
 
541 aa  205  2e-51  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  39.12 
 
 
634 aa  205  2e-51  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3279  methyl-accepting chemotaxis protein  36.94 
 
 
541 aa  204  4e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.149652  n/a   
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  38.53 
 
 
629 aa  204  4e-51  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  40.65 
 
 
533 aa  203  5e-51  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  38.4 
 
 
544 aa  204  5e-51  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  40.95 
 
 
544 aa  203  6e-51  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  37.82 
 
 
695 aa  203  6e-51  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  34.79 
 
 
620 aa  203  7e-51  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  40 
 
 
739 aa  203  7e-51  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  35.12 
 
 
547 aa  203  7e-51  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  36.5 
 
 
634 aa  203  8e-51  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  38.53 
 
 
629 aa  203  8e-51  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  36.5 
 
 
634 aa  203  8e-51  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  43.45 
 
 
643 aa  202  9.999999999999999e-51  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  38.4 
 
 
544 aa  202  9.999999999999999e-51  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  31.68 
 
 
552 aa  202  9.999999999999999e-51  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_009438  Sputcn32_0513  methyl-accepting chemotaxis sensory transducer  30.67 
 
 
542 aa  202  9.999999999999999e-51  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  38.53 
 
 
632 aa  202  9.999999999999999e-51  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  38.39 
 
 
640 aa  202  9.999999999999999e-51  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  31.68 
 
 
552 aa  202  9.999999999999999e-51  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  37.6 
 
 
541 aa  202  1.9999999999999998e-50  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  33.11 
 
 
558 aa  202  1.9999999999999998e-50  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  37.92 
 
 
630 aa  201  1.9999999999999998e-50  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  40 
 
 
647 aa  202  1.9999999999999998e-50  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.18 
 
 
630 aa  201  1.9999999999999998e-50  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  36.69 
 
 
619 aa  201  1.9999999999999998e-50  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  37.18 
 
 
630 aa  201  1.9999999999999998e-50  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  39.03 
 
 
638 aa  201  3e-50  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.46 
 
 
533 aa  201  3e-50  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  39.8 
 
 
640 aa  201  3e-50  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  39.03 
 
 
638 aa  201  3e-50  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  42.33 
 
 
630 aa  201  3e-50  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
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