| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2316 |
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| Symbol | |
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| ID | 3968146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2942664 |
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| End bp | 2944310 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921407 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_527788 |
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| Protein GI | 90021961 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0208981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTAT TTCGACGTGT AAGCATTAAA GTGAGACTGT GGCTGTTATT GGCCTTAGTA
TTGGTAGGGC TTATAGCCTT AGTTACAACC ACCATGGGGC AGCTACGGTC GTCGTTACAT
TCACTTAAAT CCAATGATAC TCGCTTAATA GTGGAGCTTG CTCACAGCAC ACTCGACTAC
TATTACCAAA AGCAAATAAC TGGGGAGCTC CCGAAGGTTG AAGCACAAGC TCAAGCAATA
GCCGCCCTAA AAAGCCTTCG CTACGACAAC GATAACTATT TTTGGGTGCA TGACAGCCAC
CCCAACATGA TTATGCACGC CCTGAAACCA TCGCTGGATG GTACTGATGT TTCCCATGTA
AAAGACCCTA ATGGCAGAAG CCTGTTTGTA GAAATGGCGA AAGTGGCAAA GACCAAGGGA
GAAGGTGAAG TAGCTTATAT GTGGCCACTA CCTGGGCAGA CAGAACCAAC GAACAAACTT
TCTTATGTGA AAAGCTTTAA ACCCTGGGGA TGGATTGTAG GTTCCGGCGT GTATCTAGTG
GATGTGCAAG CTACGTTTCT AAGTGCCTCG GTGCTGCCCA CCACCATAAG CCTTATCGTT
TTAATTCTTG TCGGCGTACT TACATATTTA ATTGCTCGGT CAATTATTCA ACCGCTAGCC
GAAACCAATT CAGCAATGAA TGATATTGCC GCAGGGGACG GCGACCTTAC TCAAAGACTG
TATGTAGACT CAAGACATCA AGATGAAATA TCGGTTATGT CGGGCAGTTT TAACGTTTTT
GTAAGCAAAA TAGAGCAAAT CATTTTACAG GTAAGCCAAG CCACCGAGCG CTTGACTGTA
GCATCCGGCC AGTTGCGCGA AATTACGCAA AATAATGCAC GTTCGATGGA CCAGCAACAG
GCGGAATCCC ATGCCGTTGC TTCAGCTATT ACCGAGATGG CTTGCACAGC AACAGAAATA
GCCAAAAATT CAGAAGGTGC TGCAAGTTCA GCCACTCAGG CAAATGACGA AGCCAGCAGT
GGCCAGAACA TCGTAACAGA AGCAATTAAT TCGGTTAAGG CGCTTGCAGA AGAAGTGAAG
CAAGCCTCCG CTGCCATAGA TACCGTAAAC ACAGACAGCC AAGCCATATC GAGCGTTCTC
GACGTAATTC GCAGCATCGC CGAACAAACT AATCTACTGG CCTTGAATGC AGCCATTGAA
GCAGCACGCG CAGGCGAGCA AGGACGTGGA TTTGCAGTTG TAGCTGATGA AGTTCGAACA
CTAGCAGCGC GCACACAAGC ATCCACAGAA GAAATACGCG GAATGATAGA ATCGTTGCAA
CAAGGCACCG CGAAAGCAGT CCAAACAATG AAAAGCGGCG ATAAAGCCAC GGAACTTACG
GTTTCAAAAG CGGAAGAAGC AGGACATTCA CTCGAAAATA TTGTTACAGC AATTAATTCC
ATTACCGACA TGAATATACA AATTGCGAGC TCCGCCGAAG AGCAATCTGC CGTGGCCCAA
GAAATAGACC AAAGCATTAA TCGCATGGCT CAGCTTTTAT CACAATCACA CACTGAAATA
GAAAAAACCA CACAATTTAG CAGTGAGCTC GAAGAGCTAA GTAACTCGCT CTCCGATTTA
GTGGGCCACT TCAAAACTCA CAAATAA
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| Protein sequence | MMLFRRVSIK VRLWLLLALV LVGLIALVTT TMGQLRSSLH SLKSNDTRLI VELAHSTLDY
YYQKQITGEL PKVEAQAQAI AALKSLRYDN DNYFWVHDSH PNMIMHALKP SLDGTDVSHV
KDPNGRSLFV EMAKVAKTKG EGEVAYMWPL PGQTEPTNKL SYVKSFKPWG WIVGSGVYLV
DVQATFLSAS VLPTTISLIV LILVGVLTYL IARSIIQPLA ETNSAMNDIA AGDGDLTQRL
YVDSRHQDEI SVMSGSFNVF VSKIEQIILQ VSQATERLTV ASGQLREITQ NNARSMDQQQ
AESHAVASAI TEMACTATEI AKNSEGAASS ATQANDEASS GQNIVTEAIN SVKALAEEVK
QASAAIDTVN TDSQAISSVL DVIRSIAEQT NLLALNAAIE AARAGEQGRG FAVVADEVRT
LAARTQASTE EIRGMIESLQ QGTAKAVQTM KSGDKATELT VSKAEEAGHS LENIVTAINS
ITDMNIQIAS SAEEQSAVAQ EIDQSINRMA QLLSQSHTEI EKTTQFSSEL EELSNSLSDL
VGHFKTHK
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