| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1396 |
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| Symbol | |
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| ID | 5080591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1583431 |
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| End bp | 1585077 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498527 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001182922 |
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| Protein GI | 146292498 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.664947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAATA AGATGACGCT TAAGACCCAG TTTATCGGGG TTATTGCTAT ACCTTGTATT
GCTCTTATCT TGATCAGCTT GACGGCGCTT CAAGGCTTAT CTGGTATGCA AGATCAAACT
AAAAAACTCG CTGAAAATAC TAGCGCACCA TTAAGGTCAA TGGCGGAGGT CGCGTCCCGA
ATTCCCCGCA TGCGAGTGGG CATTGATATT ATTATTCTGC AAGAAATACC AACGATGAAG
GATCAAAAAG GCGTATTAAC CCGAGTGACA GAAACCCGGG CTGAGGATAT TCCAGAAATG
GATGCAGCAT TAAAAGCAGC ACGTGACGCC CAAGTAAACC CCATCACCCG TGCCGAAGTA
CAAAAATTGA TCGACATCTT TGATAAAGTC AAAAGTGACG AACTCGCGCC TATGCTTGCT
GCGATGGAAA GCGGGGACGT GGCAAAATCG CAAGACATTT ATCGTAATCA ATTCGCAGCT
AGCTACAACA TTATGCGAAA GAGTACCGAT GCTATTCTTG ACTCGTTACT ACAACAGGGC
AACGCCAGCT TCGTAGAGAG TCAACAAAAC TACCAAAATA CACGCATGGA AATGTTCGTG
GTATTGGCCG TCGCACTGAT TATTTCCATT TTTCTAGGGT TTGTAATGCT GCGTCGTCTA
CGCCTTCGCG TGGCGTTATT ACAACAACAT ATTTCTTCTG CCAGCGACAA ACTTGATTTA
CACAATATGA TTGAGTTAAA GGGGCATGAT GAATTAAGCG ATATTGCCCT GCATTTTAAT
CAGTTTGTGC TGAAGATACG CAGCGCGATT GAAGCTGTGG CAGAAAACTC TCGTCAACTT
GCCCATACTG CAAATGATGT CGCAAGCAAA GCCCAAGCAA CCCATAGAAA TTGTATTAAC
GAGCGTGACC GTACCACACA AATTGCGACG GCAATCCATG AAATGGGTAC TACAGTGGAG
AGCATTGCCG ACAACGCAAC CCAAGCCGCA AATGCGGCTA AAGAAGCCGA TAATCAAGCC
CATAGTGGTG CAAATCTTGT TGCACAAGCT CGGCAAGGTG TGAGTTCGTT ATCAATCGAA
ATTCAACATA TCAGCAGCGA TATTGCCTCG CTAGCCATGC AAACCAACTC AATTGGCAGC
ATTTTGGATA CTATCCGAAG TATTTCAGAA CAAACTAACC TGTTAGCACT CAATGCCGCG
ATTGAAGCCG CACGTGCAGG CGAAACGGGA CGCGGGTTTG CTGTCGTCGC TGATGAGGTG
CGAAACCTTG CGAGTCGTTC GGCATCGTCA ACAAATGAAA TTCAAACCAT GATCGATAAG
CTGCAAGAGC AATCAGCCAA AACAGTGTCA GCAATCAAAC GTGGTCACGA ACAAAGTGGC
ATGGTCGTAA AACAAGCGGA TGATGCCAAT GACTCCTTAA CACTTATCAC CTCACATATC
AGCCAAATCA GCGATATGAA TATTCAAGTC GCAACAGCAA CAGAAGAACA GTCTATGGTT
GTGGCTGAAA TAAGCCGAAA TGTGGAAGAT ATCAATCAAT TAACCACAGA AACATCGGAA
ATTGCTGATG AACTAACAGC ATCGAGTGCA AACCTGCAGA AGCTATCGAT TCACTTAGAT
AAATTAGTAA CGCAATTTAA GTTGTAA
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| Protein sequence | MLNKMTLKTQ FIGVIAIPCI ALILISLTAL QGLSGMQDQT KKLAENTSAP LRSMAEVASR
IPRMRVGIDI IILQEIPTMK DQKGVLTRVT ETRAEDIPEM DAALKAARDA QVNPITRAEV
QKLIDIFDKV KSDELAPMLA AMESGDVAKS QDIYRNQFAA SYNIMRKSTD AILDSLLQQG
NASFVESQQN YQNTRMEMFV VLAVALIISI FLGFVMLRRL RLRVALLQQH ISSASDKLDL
HNMIELKGHD ELSDIALHFN QFVLKIRSAI EAVAENSRQL AHTANDVASK AQATHRNCIN
ERDRTTQIAT AIHEMGTTVE SIADNATQAA NAAKEADNQA HSGANLVAQA RQGVSSLSIE
IQHISSDIAS LAMQTNSIGS ILDTIRSISE QTNLLALNAA IEAARAGETG RGFAVVADEV
RNLASRSASS TNEIQTMIDK LQEQSAKTVS AIKRGHEQSG MVVKQADDAN DSLTLITSHI
SQISDMNIQV ATATEEQSMV VAEISRNVED INQLTTETSE IADELTASSA NLQKLSIHLD
KLVTQFKL
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