| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1939 |
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| Symbol | |
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| ID | 4278851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2299505 |
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| End bp | 2301421 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638134723 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_750623 |
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| Protein GI | 114563110 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.573171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAATA CATTTAATCT CAATATCGGC AACCGTATAA TCTTAGGTAT TACGGTCATA
TTGATCTTGG TCATGGGTAC TGTTATCCCC TTCGTATTAT CAGAATTCAC AACCAATATT
GATAGTGCAG AGCAACGCGA GTTACATAAA CTCTATGAAA CCGCTACCGC TGAAATTGAG
TCAACTGGGA AATTAGCCCA AGCGTTGGCA ACCGTCGTTG CTCGCAATTC AGACTTACAA
AAGTTGTTTG CCGAAGGCGA CCGAGAGACG TTAGCATTAA AAACATTACC ATTATTTGAA
ACCTTGAAAG AAGATTATGC CGTTCGTCAA TTCCAGTTTC ACTTGCCACC TGCTACCTCA
TTCTTAAGAG TACATAAGCC TGAGAAGTTT GGAGACGATT TATCATCATT TAGACAAACC
GTTATCGTTA CCAATAGAGA CCAAAAACCA GTAAGAGGAT TAGAGAAAGG CGTTGCAGGC
ATCGGAATTC GTGGAATTAT GCCTGTCAAT TATCAGAATG CACATATTGG TTCTGTAGAG
TTTGGTATGT CTTTCGGCCA GGCATTTTTT GACCAATTTA AGAATGATTA TAAGGTCGAT
ATTGCGCTTT ATACTCAAAA AAATGGACAA TTTGAAGCAT TTGGAGCGAC GACTGAACCT
CATAGTTTTT CTGATAATAC TCGTCTAGCA CAAGCATTCA ATGGAGTAAT ACTGAACAAC
CAATCTACAT TACACGACAC TTCCTATGCT GTTTATTTAC ATCAAGTTAA AGATTTCTCT
GGACAGCCAA TAGGTGTCCT AGAAATAGCG TTGGATCGCA CACACAATGT AAATGCTATC
AATGATGTGA CCTTTACTAT GATTAGTGTT GGTGTCATCG CCTTGTTATT AGGTATCGCT
ATTGCTTGGG TTATTAGCAG AAGTATCACC ACCCCAATAA ATATGACAAC CCATACAATG
AACAACATTG CCGATGGCGA TGGTGATTTA ACGCTCCGTT TATCAGTAAG CGGAAATGAT
GAAATTACCG CATTATCCAA AGCATTCAAT CAATTTGCAA CAAAGGTACA TAATACAATT
AATCAAGTTA TGTCCGCCAC ACAGCAACTG AATCACTCTG CCGAGCGTTT ATCAGGCATC
ACACTCGAAA CTCAAGCTGA TGCAGTAAAA CAGCAGCAAG AAACTGAGCA GGTTGCTACA
GCAATGAATG AAATGAGCGC GACAGTTCAA GATGTTGCAC AAAATGCAAC AGAAGCTGCT
GATGCGGCTC AAAAAGCAAA TGAGGCTACT CAAGCTGGTA AGCAGGTAGT TAGCAAGGTT
TCATCGGAAA TCAATCAATT GGCTTCTGAA ATCAATATTG CAACACATGC AGTGTCCGAT
TTACAAAATC AAACGACAGC CATTGATAGT GTTCTAGAAG TTATTCGAAA TATTTCAGAC
CAAACAAATT TATTAGCGCT GAATGCAGCT ATCGAAGCAG CCAGAGCAGG AGAGCAAGGT
CGAGGATTTG CAGTTGTTGC CGACGAGGTT CGTACCTTAG CCAGTCGTAC ACAAGCTTCC
ACGCAAGATA TACAAGCAAT GATAGAACAA TTGCAAAGTG GTGCGGCTAA AGCTGTTCAA
GTAATGAAAG ATAGCGGTAA AGTTACAGAC TCATGCGTTA CTCAGGCAAT AAATGCAGAC
CATGCACTCG ATGACATTTT TGCAGCGGTA AACACCATTA CAGAAATGAA TATTCAAATC
GCCAGCGCAG CAAACGAACA ATGTGCAGTC TCAAATGAAA TAAATAAAAA CATTACCAAT
ATCAACGATA TTGTTACCAA AACAACCGAA GGGTCAATGC AAACAGCAAG TGCAAGTGAA
GATCTGGCTG ATTTATCTAA ACAACTGAAT TCCTTAGTAG GCCAATTTAA GATTTAA
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| Protein sequence | MVNTFNLNIG NRIILGITVI LILVMGTVIP FVLSEFTTNI DSAEQRELHK LYETATAEIE
STGKLAQALA TVVARNSDLQ KLFAEGDRET LALKTLPLFE TLKEDYAVRQ FQFHLPPATS
FLRVHKPEKF GDDLSSFRQT VIVTNRDQKP VRGLEKGVAG IGIRGIMPVN YQNAHIGSVE
FGMSFGQAFF DQFKNDYKVD IALYTQKNGQ FEAFGATTEP HSFSDNTRLA QAFNGVILNN
QSTLHDTSYA VYLHQVKDFS GQPIGVLEIA LDRTHNVNAI NDVTFTMISV GVIALLLGIA
IAWVISRSIT TPINMTTHTM NNIADGDGDL TLRLSVSGND EITALSKAFN QFATKVHNTI
NQVMSATQQL NHSAERLSGI TLETQADAVK QQQETEQVAT AMNEMSATVQ DVAQNATEAA
DAAQKANEAT QAGKQVVSKV SSEINQLASE INIATHAVSD LQNQTTAIDS VLEVIRNISD
QTNLLALNAA IEAARAGEQG RGFAVVADEV RTLASRTQAS TQDIQAMIEQ LQSGAAKAVQ
VMKDSGKVTD SCVTQAINAD HALDDIFAAV NTITEMNIQI ASAANEQCAV SNEINKNITN
INDIVTKTTE GSMQTASASE DLADLSKQLN SLVGQFKI
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