Gene Pput_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0623 
Symbol 
ID5190751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp700437 
End bp702380 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content63% 
IMG OID640585075 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001265975 
Protein GI148545873 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.494937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA AACAGAAACT GACCTGGGCA TTCGCGGTCA TCGCCGGCTT GCCCATCGTT 
CTCGTGGCCA CCCTGGTGGT CATCAACCTG CGCGGCGAAG CCCGCGACGG ATTCCTCGAC
AGCAGCAGCC GGGAAATCCG CCAGGTCAGC AACGCGATGA ACATCTTCTT CCAGGGGATC
AACCAGAACG TCGAGTACAT GGCTTCCCAG CCAATGGTTG CCGCCACGGG CAGCGAGCTG
AACAAGTACA TGAGCGCAAC CCCGTCCTAC GAACTGGGCG AGCAGGCCAG CAAAATTCTC
GACTTCATGA CTCGCCTGGC CAACTCACAC CCCGCCTACG CCTACCTGTC CTACGGGGTG
AATGACGGCG GCTACACTGG CTGGCCGGCC GGCCAGAAGT TTGTCAATTA TGACCCACGC
ACGCGCCCCT GGTACCAACT TGCCATGGCC AACCCTGGCA AGACGATGCG TACCGGCGCC
TACTACTGGG CCGCCGACGA TGCGGTGCTG GTCAGCACCG TGCGCACCGT GGCCAACCAG
CTGGGCAACC CCGGCGGCGT GGTCAACATC GACGTGTCGC TCAAGGGCCT GACCGAAATC
GTCAAGCAGA TCAAACTGGG CGAAAGCGGC TACCTGATGC TGGTGGAAAG CAACGGCAAC
GTGATGGTCG ACCCGCGCGA CGCCGCCCAC AACTTCAAGC AGCTGGGAAG CTTTGGCGAC
GGTTACGCCA AGCTGGCCAA AGCCGGCAAA GGCCTGGTCG AGGTCGAACT CAATGGCGTG
CACTACATGG CCAACGTCTA CCCAGACCAG CAGCTGGGCT GGACCTTCAT CGGCCTGATC
GAACAAAGCG AAGTGATGCA GACCACCACC CGGCTCACCT GGCTGATCGG TGTCATCGCT
GTGGTGTTGG CCTCGCTGTT CGCGGTGGTC GGTGCGGCCT TCGCCAAACT GATCGTGCGC
CCGATCAACA GCGTCACCAA CGGCCTGGAG GACATTGCCC AAGGTGAGGG TGACCTGACC
CGCAACCTGG AAATCCGCGG CCGCGACGAA ACCGCGCAAC TGGCCAGCTG GTTCAACCAG
TTCCTCGGTG CCATTCGCAG CCTGATCCAG CACATCGGTG CTGCCGCCAG CAAGATCCTC
AGCACGTCCA GCAGCTCGAC CCGCGTCTCC AGCGACATGG CCGAGGCGGC CGGCCGCCAG
CGCGAAGCCG TGGACATGGT TTCCACTGCA TTCCACGAAA TGGTCGCCAC CGCCAATGAA
GTGGCACGGT CCTGCAGCCA GGCCGCGCAG TCGGCCGACA GCGGCCAGCA GCAGGCCCGC
GAAGGGCAGC AACAGATCGA TGCAGCGGTA CACAGCGTTG ATCGCCTGAG CCACGAGATC
GAGCAATCGG CCCAGTCGAT CCAGCAACTG GAGCGTGACA GCAACGCCAT TCAGTCGATC
CTCGGCACCA TCCGTTCGAT TGCCGAACAA ACCAACCTGC TGGCCCTGAA CGCCGCCATC
GAAGCGGCCC GTGCTGGTGA GCAGGGCCGC GGCTTTGCCG TGGTGGCCGA CGAAGTACGG
GCGCTGGCCA AGCGTACTGC CGACTCCACC GCTGAAATCG ACGGTTTGCT GGGCAACCTG
GCCAGCCGTA CCGCCGAAGT GGCCGAGCAG ATGCACGCCA GCCTGGAAGT GTCGCAGCAG
TCGGTGAGCC GCATTGGTCT GGCCCGCGAC AGCTTCGGGC AGATCCGTGA GTCGGTGGAT
GTGATCCGCG ACATGAACAC CCAGATCGCC ACGGCAGCCG AAGAACAGCA TCAGGTGGCT
GAGGACATCA ACCGGCACAT CAGCCAGATT CACGGGGATG CGCAGTTGGT GGCCGAGCTG
GCCCAGGCGG CGCGCCAGGA CTCCGAGAGC CTGGCCGGGC TGTCCAATGA GCTGGATACG
CTGGTGCGCA GGTTCCGCAC CTGA
 
Protein sequence
MSIKQKLTWA FAVIAGLPIV LVATLVVINL RGEARDGFLD SSSREIRQVS NAMNIFFQGI 
NQNVEYMASQ PMVAATGSEL NKYMSATPSY ELGEQASKIL DFMTRLANSH PAYAYLSYGV
NDGGYTGWPA GQKFVNYDPR TRPWYQLAMA NPGKTMRTGA YYWAADDAVL VSTVRTVANQ
LGNPGGVVNI DVSLKGLTEI VKQIKLGESG YLMLVESNGN VMVDPRDAAH NFKQLGSFGD
GYAKLAKAGK GLVEVELNGV HYMANVYPDQ QLGWTFIGLI EQSEVMQTTT RLTWLIGVIA
VVLASLFAVV GAAFAKLIVR PINSVTNGLE DIAQGEGDLT RNLEIRGRDE TAQLASWFNQ
FLGAIRSLIQ HIGAAASKIL STSSSSTRVS SDMAEAAGRQ REAVDMVSTA FHEMVATANE
VARSCSQAAQ SADSGQQQAR EGQQQIDAAV HSVDRLSHEI EQSAQSIQQL ERDSNAIQSI
LGTIRSIAEQ TNLLALNAAI EAARAGEQGR GFAVVADEVR ALAKRTADST AEIDGLLGNL
ASRTAEVAEQ MHASLEVSQQ SVSRIGLARD SFGQIRESVD VIRDMNTQIA TAAEEQHQVA
EDINRHISQI HGDAQLVAEL AQAARQDSES LAGLSNELDT LVRRFRT