More than 300 homologs were found in PanDaTox collection
for query gene Pput_0623 on replicon NC_009512
Organism: Pseudomonas putida F1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_0584  methyl-accepting chemotaxis transducer  99.38 
 
 
647 aa  1311    Pseudomonas putida KT2440  Bacteria  normal  0.77697  normal  0.644217 
 
 
-
 
NC_010501  PputW619_4580  methyl-accepting chemotaxis sensory transducer  86.5 
 
 
648 aa  1101    Pseudomonas putida W619  Bacteria  normal  normal  0.0108713 
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  72.73 
 
 
646 aa  945    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_009512  Pput_0623  methyl-accepting chemotaxis sensory transducer  100 
 
 
647 aa  1316    Pseudomonas putida F1  Bacteria  normal  0.494937  normal 
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  72.33 
 
 
646 aa  943    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  79.01 
 
 
648 aa  1006    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_010322  PputGB1_0629  methyl-accepting chemotaxis sensory transducer with Cache sensor  97.84 
 
 
647 aa  1221    Pseudomonas putida GB-1  Bacteria  normal  0.624074  hitchhiker  0.000681907 
 
 
-
 
NC_009654  Mmwyl1_2719  methyl-accepting chemotaxis sensory transducer  37.75 
 
 
655 aa  441  9.999999999999999e-123  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0130  methyl-accepting chemotaxis sensory transducer  38.28 
 
 
671 aa  421  1e-116  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3100  chemotaxis sensory transducer  34.8 
 
 
652 aa  386  1e-106  Shewanella denitrificans OS217  Bacteria  normal  0.594551  n/a   
 
 
-
 
NC_008752  Aave_1081  methyl-accepting chemotaxis sensory transducer  31.27 
 
 
629 aa  320  6e-86  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_5569  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.8 
 
 
630 aa  310  5e-83  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C1139  methyl-accepting chemotaxis sensory transducer, Cache sensor  29.65 
 
 
630 aa  292  1e-77  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.584827 
 
 
-
 
NC_013173  Dbac_1799  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.44 
 
 
668 aa  280  8e-74  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.481177  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  31.78 
 
 
630 aa  277  4e-73  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  31.78 
 
 
630 aa  277  4e-73  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.78 
 
 
630 aa  277  5e-73  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  31.63 
 
 
630 aa  276  1.0000000000000001e-72  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  30.19 
 
 
623 aa  274  4.0000000000000004e-72  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  35.67 
 
 
622 aa  273  5.000000000000001e-72  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  30.78 
 
 
623 aa  271  2e-71  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  32.06 
 
 
630 aa  271  2.9999999999999997e-71  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  31.76 
 
 
630 aa  267  5e-70  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  32.02 
 
 
645 aa  267  5.999999999999999e-70  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  31.96 
 
 
630 aa  266  1e-69  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  31.8 
 
 
630 aa  264  4.999999999999999e-69  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  35.37 
 
 
633 aa  259  9e-68  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  35.23 
 
 
636 aa  259  1e-67  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  36.27 
 
 
638 aa  258  2e-67  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  35.88 
 
 
625 aa  258  3e-67  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  35.06 
 
 
627 aa  258  3e-67  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  34.2 
 
 
627 aa  256  6e-67  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  30.88 
 
 
645 aa  257  6e-67  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  33.59 
 
 
638 aa  256  8e-67  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  30.5 
 
 
645 aa  255  2.0000000000000002e-66  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  43.26 
 
 
554 aa  254  3e-66  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  30.5 
 
 
645 aa  254  4.0000000000000004e-66  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  34.58 
 
 
627 aa  253  5.000000000000001e-66  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  31.28 
 
 
626 aa  253  6e-66  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  31.57 
 
 
630 aa  253  7e-66  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  33.94 
 
 
629 aa  252  1e-65  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  33.94 
 
 
629 aa  253  1e-65  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  36.67 
 
 
643 aa  251  2e-65  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  33.27 
 
 
630 aa  252  2e-65  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  34.01 
 
 
623 aa  251  2e-65  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.47 
 
 
626 aa  251  3e-65  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  43.45 
 
 
559 aa  251  3e-65  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  34.61 
 
 
638 aa  251  4e-65  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  31.17 
 
 
645 aa  251  4e-65  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  33.28 
 
 
712 aa  251  4e-65  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  32.34 
 
 
628 aa  250  6e-65  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  33.9 
 
 
652 aa  249  8e-65  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1741  methyl-accepting chemotaxis protein  33.67 
 
 
623 aa  249  1e-64  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE2142  methyl-accepting chemotaxis protein  27.96 
 
 
712 aa  248  2e-64  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  33.19 
 
 
640 aa  248  2e-64  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_007519  Dde_3020  methyl-accepting chemotaxis sensory transducer  28.18 
 
 
697 aa  248  2e-64  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  32.17 
 
 
643 aa  248  3e-64  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  34.14 
 
 
626 aa  248  3e-64  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.89 
 
 
628 aa  247  4.9999999999999997e-64  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  34.45 
 
 
712 aa  246  6e-64  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  35.46 
 
 
639 aa  247  6e-64  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  33.46 
 
 
629 aa  247  6e-64  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  31.98 
 
 
640 aa  246  6.999999999999999e-64  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  33.33 
 
 
629 aa  246  6.999999999999999e-64  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  33.14 
 
 
628 aa  245  1.9999999999999999e-63  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  38.94 
 
 
637 aa  245  1.9999999999999999e-63  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008577  Shewana3_3950  methyl-accepting chemotaxis sensory transducer  34.7 
 
 
623 aa  244  3e-63  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  33.15 
 
 
713 aa  244  5e-63  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008321  Shewmr4_3752  methyl-accepting chemotaxis sensory transducer  34.7 
 
 
623 aa  243  6e-63  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  31.67 
 
 
626 aa  243  7.999999999999999e-63  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  33.57 
 
 
626 aa  242  1e-62  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_008322  Shewmr7_3825  methyl-accepting chemotaxis sensory transducer  34.62 
 
 
623 aa  243  1e-62  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  35.81 
 
 
642 aa  241  2e-62  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_4557  methyl-accepting chemotaxis protein  34 
 
 
623 aa  242  2e-62  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.29 
 
 
626 aa  242  2e-62  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  36.46 
 
 
636 aa  242  2e-62  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  35.94 
 
 
638 aa  241  2.9999999999999997e-62  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  33.9 
 
 
641 aa  241  4e-62  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  33.63 
 
 
630 aa  241  4e-62  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  44.38 
 
 
636 aa  241  4e-62  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  41.76 
 
 
541 aa  241  4e-62  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  35.74 
 
 
641 aa  241  4e-62  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  35.74 
 
 
638 aa  240  5e-62  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  35.74 
 
 
638 aa  240  5e-62  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  33.28 
 
 
632 aa  240  5e-62  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  35.74 
 
 
638 aa  240  5.999999999999999e-62  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  45.48 
 
 
714 aa  240  5.999999999999999e-62  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  31.98 
 
 
639 aa  239  9e-62  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  35.94 
 
 
638 aa  239  1e-61  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  42.22 
 
 
674 aa  238  2e-61  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.85 
 
 
623 aa  238  2e-61  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  33.27 
 
 
622 aa  238  2e-61  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  36.17 
 
 
541 aa  238  2e-61  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  43.98 
 
 
714 aa  238  2e-61  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_1305  methyl-accepting chemotaxis sensory transducer  29.02 
 
 
695 aa  238  3e-61  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.0484461 
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  34.68 
 
 
624 aa  238  3e-61  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  33.06 
 
 
628 aa  238  3e-61  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  35.73 
 
 
638 aa  238  3e-61  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  31.41 
 
 
631 aa  237  4e-61  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.77 
 
 
626 aa  238  4e-61  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
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