Gene Dvul_1305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1305 
Symbol 
ID4662387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1594835 
End bp1596922 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content60% 
IMG OID639819536 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_966751 
Protein GI120602351 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0484461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTC GTACCAAACT CATCTTGTCG TTTCTTGCAG CTATCGTGGT CGCCATCGGC 
AGCATCTCCC TTCTCGTCTC GTACCAAGTG CGTAGTTACG CCGAAAAGGA CTTCAAGGAG
AGTTCTCTTG GTCAGTTGAA GCGCGTCAAC GAGTTTCTGG TCACATTCTT TTCCGAGTCT
GAGCACGGGG TAGCCTACAT TTCAAGCTTG AGCGCCATGA AGGCGGCGAA GGGTACCGTA
CCCAGTTATG TGAATGAGTC GTCTTCCAAG GTCGTGCGCT ACGGCGAGAT GTCGGAAGCC
GCCAAGCGTG CCTACGAGGT GCTTGCCCCG CTGAAGAAGA CGAACCCCTA CTACGACGAA
ACCTTCGTAG CGTTTGATGA CGGCGGTTTT CTTGCCGGGT CGGAGATGCA GATGCCTGCC
GGGTATGACC CCCGCAAAAG GGGCTGGTAT CAGGCTGCGG TGTCCGGTGA TGGTATTCAG
ATGACAGACG CCTACAAGTC GACCACGGGC GAGGCTGTCA CCAGTGCCGT GGGGCGCATC
GTCGACGCTT CGGGGCGCAC CATCGGTGCC GCGGGCATCG ACATCAACCT CTCTACCCTG
ACCAAGGTGA TTGCCAACAT TCGCATCGGC GAGACCGGTT ATGTGGTGCT CATCGAAGAT
TCGGGCGTGG TGCTTTCAGA CTCGAAAGAC CCGGCCAATC TCTTCAAGAA AGTCACAGAG
ATTCAGGACA ACCTCTTCCG CGATGCATTC GCCATGCGTG AAGGCGTGTT CGAGGCGAAG
CTTGGCGGCA AGGAGCGTCT GGTCTCTGTG CTGACGGGTT TTGAAGGCTG GAAGCTTGTC
GTCATCATCG ACACCGATGA GATATTCGCA GAGTCGCGGG CCATCGTGCT GAAGATCGTC
GGGGTGGGTG CCGTGATAGC CCTCATCCTT GTGGTCTGTG CGTGGTTCAT CTCCCGCACG
ATAGCCAACC CCATCGACCT GCTCGTGCGT GCATCTGGGG ACATCGCCGC AGGGAACTTC
AATGCGTTGC CCGAAAGTTC ACGGTTCTCT GGTGAACTGC TGACACTGCA TGGCAGCCTG
AAGCGCATGG TGGAAAGCCT TGGCGAGCTC ATCAAGACTG CTGAAGCCAA ATCGCAGGAG
GCCGAACAGC AGACTGCGCT GGCAAAGACA GCCCTTGAAG AGGCCGAAGA AGCCCGCAAG
GCTGCCGAAC AAGCCAAGCG GAACGGCATG TTGCAGGCGG CGCGTGACCT TCAGGGCATT
GTCGAGGTCA TCTCCGCGGC CTCTGAAGAG CTTGCCGCAC AGATAGAACA GGCCTCGCGC
GGGGCGGAGT TCCAGAGTCA GCGCACCGGA GAGACCGCCA CGGCCATGGA AGAGATGAAC
GCCACCGTGC TCGAGGTGGC CCGTAGTGCT GGCAGTGCCG CCGAGACATC TGCCAATGCC
CGAGACAATG CAGAGGTCGG GGCGGGCATC GTGCGCGACA TGGTGAAGGG TATCAACTCC
GTGAATCAGT ATGCCGAGCG GTTGCAGCAG GACATGGACG TACTGGGCCG CAGGGCCGAG
GACATAGGCC GCATCATCAA CGTCATCAAT GACATCGCCG ACCAGACGAA CCTGCTCGCG
TTGAACGCCG CCATCGAAGC GGCCCGTGCT GGCGAGGCCG GACGCGGTTT TGCCGTGGTC
GCTGACGAGG TGCGCAAGCT GGCTGAGAAG ACCATGGCTG CCACCAAGGA GGTGAGCGAC
GCCATCGGCG GTATACAGTC CGGCACCCGT GCAAGCTTCG AGCAGGTGCA GCAGACGGTG
AAAGAAGTGG ACTCCGTAAC GACCATGGCC GAGAAGGCTG GCAACTCGCT GGCTACCATC
GTGCAGCTGT CGGACAAGTC TTCAGACCAG GTGCGCTCTA TCGCGACCGC GAGTGAAGAG
CAGTCTGCCG CCTCTGAAGA AATCGCCCAT GCCGTGGACG AGATAAACCG CATCACTGCC
GAGACCAGCG ACGCCATGCG GCAGTCGGCA CAGGCTGTGA CCGAGCTTGC CGAACAGGCC
CAGCGGCTGA AGAACATCAT CGAGACCATG CAGCGCGACA ACGCCTAG
 
Protein sequence
MTIRTKLILS FLAAIVVAIG SISLLVSYQV RSYAEKDFKE SSLGQLKRVN EFLVTFFSES 
EHGVAYISSL SAMKAAKGTV PSYVNESSSK VVRYGEMSEA AKRAYEVLAP LKKTNPYYDE
TFVAFDDGGF LAGSEMQMPA GYDPRKRGWY QAAVSGDGIQ MTDAYKSTTG EAVTSAVGRI
VDASGRTIGA AGIDINLSTL TKVIANIRIG ETGYVVLIED SGVVLSDSKD PANLFKKVTE
IQDNLFRDAF AMREGVFEAK LGGKERLVSV LTGFEGWKLV VIIDTDEIFA ESRAIVLKIV
GVGAVIALIL VVCAWFISRT IANPIDLLVR ASGDIAAGNF NALPESSRFS GELLTLHGSL
KRMVESLGEL IKTAEAKSQE AEQQTALAKT ALEEAEEARK AAEQAKRNGM LQAARDLQGI
VEVISAASEE LAAQIEQASR GAEFQSQRTG ETATAMEEMN ATVLEVARSA GSAAETSANA
RDNAEVGAGI VRDMVKGINS VNQYAERLQQ DMDVLGRRAE DIGRIINVIN DIADQTNLLA
LNAAIEAARA GEAGRGFAVV ADEVRKLAEK TMAATKEVSD AIGGIQSGTR ASFEQVQQTV
KEVDSVTTMA EKAGNSLATI VQLSDKSSDQ VRSIATASEE QSAASEEIAH AVDEINRITA
ETSDAMRQSA QAVTELAEQA QRLKNIIETM QRDNA