Gene SO_4454 details

Gene Information

• Locus tag: SO_4454
• ID: 1172051
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4643423
• End bp: 4645351
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637346172
• Product: methyl-accepting chemotaxis protein
• Protein accession: NP_719975
• Protein GI: 24375932
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGATAT TTATGATATT GAATAACCTT ACGATTAAGC AGAAAATCCT GCTAACAGTC 
ACATTTGCGG TACTCTTGTC GACCATACTT GTTGGTGTGA TCAGCCAACG TAGCGCCAAA 
AACGTGGTAC AGCAGCGCAT GCTGGGGTCG GAAATGCCCA GCCTAATGAT GCAGATCCGT 
AATAAAATTG ATTTGGATAT TTCGAGCTTG ATGAATGCTG CCGAACAACT CGCCAGCAGC 
CGTATGCTTT TGCAATGGCT GGAAAATGGT CGGCCGCAGG AGCAAGAACC CCAAGTCGTT 
GCCCAATTAA AAGACATCAC CCGCCAATAC CATTTAGCCC AAGCCTCCTA CGCTGATAGA 
CAAACCGCTG CTTATTACAC TCAAGACGGT TTTTTACGTG AACTCACCCC CGCGCAAGAC 
GGTTGGTTTT TTAGTTATCG CGATAGCGGC CAAGAACGGA TGCTAAACGT ATTTACCGAA 
GCCAATGGCG AGATCAAACT CTTTATCAAT TATCAGCAAC CTAACGGTCG CGGACTCGTT 
GGCCTTGCCA AATCCCTCGA TGATATGGTG CAACTTCTCG ACTCATTTAA AATTGAAGAA 
ACAGGATTTG TCTACTTAGT TGATGCCAAA GGCGAGGTCA AACTGCATCC AGACCCCAGT 
CAAATCGGCA AAACGAGCCT CAAGAGCTTA TACTCTGCGG CCAACATAGG TTCATTACTC 
AATCGTAGCG ATTTCAATCT GATTGATACC GAAATCCAAG GTGAAAAAAC CTTCGTTGCT 
AGCAGTTATA TTCCATCGAT GGATTGGTAT TTGGTCGCTC AAGTGCCAGA AGCTGAAGTC 
TTTGCCCTAC TCAGGGACGC GGTTTACCAA ATCTTGATTT GGACCTTAAT TATTGCCGCA 
GGTTTTATTA TGCTCGCCAT TGTTGTGGCA GGCTCTGTTA GCCGCCCTAT CGCCCAAGTC 
GCAGCGATGT TCCGCGATAT TGGTGAAGGT GAAGGCGATT TACGTCAGCG CTTACCAGTA 
AATGGCAAAG ATGAAATTGC ACAACTTGCC CAAGGATTTA ATAGCTTTAT TAGCAAAATC 
CAAGACTCAG TGATTGAAGT CGCACAGACC AGCGAACAAC TCGGTCTCTC AGCGAAAGAT 
GTGTCTAATC AAGCGCAGCA AACCCTTGAA GACAGTCATG AGCAAAAAGA TCGCACCATG 
ATGGTGGTGA CCGCCATCAA TGAAATGGGC GCAACCGTAA ATGAAATCGC CAGCAATGCC 
GCCCAAGCCG CTGTCGCCGC AAAAGATGCC GATACAGAAT CGAATAGTGG CCAAGTGGTG 
GTAACACGCG CACGGGATAC GATCAATCAG CTCTCCCATG ATGTAGAGCA AGTAGGTGAA 
GTGATTGAAT CCCTCGCAAC TCATACCAAA TCTATCGGTG GGATTCTCGA TGTGATCCGC 
GCCATTTCGG AGCAAACTAA CCTACTCGCC CTTAACGCCG CTATTGAAGC CGCGCGAGCT 
GGTGAAGCAG GGCGTGGCTT TGCGGTGGTC GCCGATGAAG TGCGTAATCT GGCATCACGA 
ACCGCTGCTT CCACTAACGA AGTCCAAGGC ATGATCGATA AATTGCAGTC AGAGGCAAGT 
CGCGCAGTGA GTGCTATGGC GCAGAGCCGC GCACGCTCCC ACGAAGGTGT GACTGCAGTT 
GATGAGGCTA GCCAGTCTTT GGTTGGCATT AGCAAGCGTA TTGGCCTTAT CAGTGATATG 
AATATTCAGG TCGCAGCGGC AACGGAAGAA CAATCGACCG TTGTAGAGGA TATTAACCGT 
AACGTGACCG AAATTAACGA CATCACCCAA CGCACCGCCA GCACGGCACA GGCAGCGGCG 
CAGGCCAGTT TAGCGTTAAA TCAACTCGCC CACCGTTTAG ATACCTTGGT AGCGAAGTTC 
AAAGTCTAA 

 

Protein sequence

MLIFMILNNL TIKQKILLTV TFAVLLSTIL VGVISQRSAK NVVQQRMLGS EMPSLMMQIR 
NKIDLDISSL MNAAEQLASS RMLLQWLENG RPQEQEPQVV AQLKDITRQY HLAQASYADR 
QTAAYYTQDG FLRELTPAQD GWFFSYRDSG QERMLNVFTE ANGEIKLFIN YQQPNGRGLV 
GLAKSLDDMV QLLDSFKIEE TGFVYLVDAK GEVKLHPDPS QIGKTSLKSL YSAANIGSLL 
NRSDFNLIDT EIQGEKTFVA SSYIPSMDWY LVAQVPEAEV FALLRDAVYQ ILIWTLIIAA 
GFIMLAIVVA GSVSRPIAQV AAMFRDIGEG EGDLRQRLPV NGKDEIAQLA QGFNSFISKI 
QDSVIEVAQT SEQLGLSAKD VSNQAQQTLE DSHEQKDRTM MVVTAINEMG ATVNEIASNA 
AQAAVAAKDA DTESNSGQVV VTRARDTINQ LSHDVEQVGE VIESLATHTK SIGGILDVIR 
AISEQTNLLA LNAAIEAARA GEAGRGFAVV ADEVRNLASR TAASTNEVQG MIDKLQSEAS 
RAVSAMAQSR ARSHEGVTAV DEASQSLVGI SKRIGLISDM NIQVAAATEE QSTVVEDINR 
NVTEINDITQ RTASTAQAAA QASLALNQLA HRLDTLVAKF KV