Gene PP_0584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0584 
Symbol 
ID1044392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp681327 
End bp683270 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content63% 
IMG OID637143967 
Productmethyl-accepting chemotaxis transducer 
Protein accessionNP_742747 
Protein GI26987322 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.77697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.644217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA AACAGAAATT GACCTGGGCA TTCGCGGTCA TCGCCGGCTT GCCCATCGTT 
CTGGTGGCCA CCCTGGTGGT CATCAACCTG CGCGGCGAAG CCCGCGACGG ATTCCTCGAC
AGCAGCAGCC GGGAAATCCG CCAGGTCAGC AATGCGATGA ACATCTTCTT CCAGGGGATC
AACCAGAACG TCGAGTACAT GGCTTCCCAG CCAATGGTTG CCGCCACGGG CAGCGAGCTG
AACAAGTACA TGAGCGCAAC CCCGTCCTAC GAACTGGGCG AGCAGGCCAG CAAAATTCTC
GACTTCATGA CTCGCCTGGC CAACTCACAT CCCGCCTACG CCTACCTGTC CTACGGGGTG
AATGACGGCG GCTACACCGG CTGGCCGGCC GGCCAGAAGT TTGTCAATTA TGACCCACGC
ACGCGCCCCT GGTACCAACT TGCCATGGCC AACCCTGGCA AGACGATGCG TACCGGCGCC
TACTACTGGG CCGCCGACGA TGCAGTGCTG GTCAGTACCG TGCGCACCGT GGCCAACCAG
CTGGGCAACC CCGGCGGCGT GGTCAACATC GACGTGTCGC TCAAGGGCCT GACCGAGATC
GTCAAGCAGA TCAAACTGGG CGAAAGCGGC TACCTGATGC TGGTGGAAAG CAACGGCAAC
GTGATGGTCG ACCCGCGCGA CGCCACCCAC AATTTCAAGC AGCTGGGAAG CTTTGGCGAC
GGTTATGCCA AGCTGGCCAA AGCCGGCAAA GGCCTGGTCG AGGTCGAACT CAATGGCGTG
CACTACATGG CCAACGTCTA CCCCGACCAG CAGCTGGGCT GGACCTTCAT CGGCCTGATC
GAACAAAGCG AAGTGATGCA GACCACCACC CGGCTCACCT GGCTGATCGG TGTCATCGCT
GTGGTGTTGG CCGCGCTGTT CGCGGTGGTC GGTGCGGCCT TCGCCAAACT GATCGTGCGC
CCGATCAACA GCGTCACCAA TGGCCTGGAA GACATTGCCC AAGGTGAGGG TGACCTGACC
CGCAACCTGG AAATCCGCGG CCGCGACGAA ACCGCGCAAC TGGCCAACTG GTTCAACCAG
TTCCTCGGTG CCATTCGCAG CCTGATCCAG CACATCGGCA CTGCTGCCAG CAAGATCCTC
AGCACGTCCA GCAGCTCGAC CCGCGTCTCC AGTGACATGG CCGAGGCGGC CGGCCGCCAG
CGCGAAGCCG TGGACATGGT TTCCACCGCA TTCCACGAAA TGGTCGCCAC CGCCAATGAA
GTGGCACGGT CCTGCAGCCA GGCGGCGCAG TCGGCCGATA GCGGCCAGCA GCAGGCCCGC
GAAGGGCAGC AGCAGATCGA TGCGGCGGTA CACAGCGTTG ATCGCCTTAG CCACGAAATC
GAGCAATCGG CCCAGTCGAT CCAACAGCTG GAGCGTGACA GCAACGCCAT TCAGTCGATC
CTCGGCACCA TCCGTTCGAT TGCCGAACAG ACCAACCTGC TGGCCCTGAA CGCCGCCATC
GAAGCGGCCC GTGCCGGTGA GCAGGGCCGC GGCTTTGCCG TGGTGGCCGA CGAAGTGCGG
GCGCTGGCCA AGCGTACTGC CGACTCCACC GCCGAAATCG ACGGTTTGCT GGGCAACCTG
GCCAGCCGTA CTGCCGAAGT GGCCGAGCAG ATGCACGCCA GCCTGGAAGT GTCGCAGCAG
TCGGTCAGCC GCATTGGCCT GGCCCGCGAC AGCTTCGGGC AGATCCGTGA GTCGGTGGAC
GTGATCCGCG ACATGAACAC CCAGATCGCC ACGGCAGCCG AAGAACAGCA TCAGGTGGCT
GAGGACATCA ACCGGCACAT CAGCCAGATT CACGGGGATG CGCAGTTGGT GGCCGAGCTG
GCCCAGGCGG CGCGCCAGGA CTCCGAGAGC CTGGCCGGGC TGTCCAATGA GCTGGATACG
CTGGTGCGCA GGTTCCGCAC CTGA
 
Protein sequence
MSIKQKLTWA FAVIAGLPIV LVATLVVINL RGEARDGFLD SSSREIRQVS NAMNIFFQGI 
NQNVEYMASQ PMVAATGSEL NKYMSATPSY ELGEQASKIL DFMTRLANSH PAYAYLSYGV
NDGGYTGWPA GQKFVNYDPR TRPWYQLAMA NPGKTMRTGA YYWAADDAVL VSTVRTVANQ
LGNPGGVVNI DVSLKGLTEI VKQIKLGESG YLMLVESNGN VMVDPRDATH NFKQLGSFGD
GYAKLAKAGK GLVEVELNGV HYMANVYPDQ QLGWTFIGLI EQSEVMQTTT RLTWLIGVIA
VVLAALFAVV GAAFAKLIVR PINSVTNGLE DIAQGEGDLT RNLEIRGRDE TAQLANWFNQ
FLGAIRSLIQ HIGTAASKIL STSSSSTRVS SDMAEAAGRQ REAVDMVSTA FHEMVATANE
VARSCSQAAQ SADSGQQQAR EGQQQIDAAV HSVDRLSHEI EQSAQSIQQL ERDSNAIQSI
LGTIRSIAEQ TNLLALNAAI EAARAGEQGR GFAVVADEVR ALAKRTADST AEIDGLLGNL
ASRTAEVAEQ MHASLEVSQQ SVSRIGLARD SFGQIRESVD VIRDMNTQIA TAAEEQHQVA
EDINRHISQI HGDAQLVAEL AQAARQDSES LAGLSNELDT LVRRFRT