Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0584 |
Symbol | |
ID | 1044392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 681327 |
End bp | 683270 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143967 |
Product | methyl-accepting chemotaxis transducer |
Protein accession | NP_742747 |
Protein GI | 26987322 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.77697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.644217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCA AACAGAAATT GACCTGGGCA TTCGCGGTCA TCGCCGGCTT GCCCATCGTT CTGGTGGCCA CCCTGGTGGT CATCAACCTG CGCGGCGAAG CCCGCGACGG ATTCCTCGAC AGCAGCAGCC GGGAAATCCG CCAGGTCAGC AATGCGATGA ACATCTTCTT CCAGGGGATC AACCAGAACG TCGAGTACAT GGCTTCCCAG CCAATGGTTG CCGCCACGGG CAGCGAGCTG AACAAGTACA TGAGCGCAAC CCCGTCCTAC GAACTGGGCG AGCAGGCCAG CAAAATTCTC GACTTCATGA CTCGCCTGGC CAACTCACAT CCCGCCTACG CCTACCTGTC CTACGGGGTG AATGACGGCG GCTACACCGG CTGGCCGGCC GGCCAGAAGT TTGTCAATTA TGACCCACGC ACGCGCCCCT GGTACCAACT TGCCATGGCC AACCCTGGCA AGACGATGCG TACCGGCGCC TACTACTGGG CCGCCGACGA TGCAGTGCTG GTCAGTACCG TGCGCACCGT GGCCAACCAG CTGGGCAACC CCGGCGGCGT GGTCAACATC GACGTGTCGC TCAAGGGCCT GACCGAGATC GTCAAGCAGA TCAAACTGGG CGAAAGCGGC TACCTGATGC TGGTGGAAAG CAACGGCAAC GTGATGGTCG ACCCGCGCGA CGCCACCCAC AATTTCAAGC AGCTGGGAAG CTTTGGCGAC GGTTATGCCA AGCTGGCCAA AGCCGGCAAA GGCCTGGTCG AGGTCGAACT CAATGGCGTG CACTACATGG CCAACGTCTA CCCCGACCAG CAGCTGGGCT GGACCTTCAT CGGCCTGATC GAACAAAGCG AAGTGATGCA GACCACCACC CGGCTCACCT GGCTGATCGG TGTCATCGCT GTGGTGTTGG CCGCGCTGTT CGCGGTGGTC GGTGCGGCCT TCGCCAAACT GATCGTGCGC CCGATCAACA GCGTCACCAA TGGCCTGGAA GACATTGCCC AAGGTGAGGG TGACCTGACC CGCAACCTGG AAATCCGCGG CCGCGACGAA ACCGCGCAAC TGGCCAACTG GTTCAACCAG TTCCTCGGTG CCATTCGCAG CCTGATCCAG CACATCGGCA CTGCTGCCAG CAAGATCCTC AGCACGTCCA GCAGCTCGAC CCGCGTCTCC AGTGACATGG CCGAGGCGGC CGGCCGCCAG CGCGAAGCCG TGGACATGGT TTCCACCGCA TTCCACGAAA TGGTCGCCAC CGCCAATGAA GTGGCACGGT CCTGCAGCCA GGCGGCGCAG TCGGCCGATA GCGGCCAGCA GCAGGCCCGC GAAGGGCAGC AGCAGATCGA TGCGGCGGTA CACAGCGTTG ATCGCCTTAG CCACGAAATC GAGCAATCGG CCCAGTCGAT CCAACAGCTG GAGCGTGACA GCAACGCCAT TCAGTCGATC CTCGGCACCA TCCGTTCGAT TGCCGAACAG ACCAACCTGC TGGCCCTGAA CGCCGCCATC GAAGCGGCCC GTGCCGGTGA GCAGGGCCGC GGCTTTGCCG TGGTGGCCGA CGAAGTGCGG GCGCTGGCCA AGCGTACTGC CGACTCCACC GCCGAAATCG ACGGTTTGCT GGGCAACCTG GCCAGCCGTA CTGCCGAAGT GGCCGAGCAG ATGCACGCCA GCCTGGAAGT GTCGCAGCAG TCGGTCAGCC GCATTGGCCT GGCCCGCGAC AGCTTCGGGC AGATCCGTGA GTCGGTGGAC GTGATCCGCG ACATGAACAC CCAGATCGCC ACGGCAGCCG AAGAACAGCA TCAGGTGGCT GAGGACATCA ACCGGCACAT CAGCCAGATT CACGGGGATG CGCAGTTGGT GGCCGAGCTG GCCCAGGCGG CGCGCCAGGA CTCCGAGAGC CTGGCCGGGC TGTCCAATGA GCTGGATACG CTGGTGCGCA GGTTCCGCAC CTGA
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Protein sequence | MSIKQKLTWA FAVIAGLPIV LVATLVVINL RGEARDGFLD SSSREIRQVS NAMNIFFQGI NQNVEYMASQ PMVAATGSEL NKYMSATPSY ELGEQASKIL DFMTRLANSH PAYAYLSYGV NDGGYTGWPA GQKFVNYDPR TRPWYQLAMA NPGKTMRTGA YYWAADDAVL VSTVRTVANQ LGNPGGVVNI DVSLKGLTEI VKQIKLGESG YLMLVESNGN VMVDPRDATH NFKQLGSFGD GYAKLAKAGK GLVEVELNGV HYMANVYPDQ QLGWTFIGLI EQSEVMQTTT RLTWLIGVIA VVLAALFAVV GAAFAKLIVR PINSVTNGLE DIAQGEGDLT RNLEIRGRDE TAQLANWFNQ FLGAIRSLIQ HIGTAASKIL STSSSSTRVS SDMAEAAGRQ REAVDMVSTA FHEMVATANE VARSCSQAAQ SADSGQQQAR EGQQQIDAAV HSVDRLSHEI EQSAQSIQQL ERDSNAIQSI LGTIRSIAEQ TNLLALNAAI EAARAGEQGR GFAVVADEVR ALAKRTADST AEIDGLLGNL ASRTAEVAEQ MHASLEVSQQ SVSRIGLARD SFGQIRESVD VIRDMNTQIA TAAEEQHQVA EDINRHISQI HGDAQLVAEL AQAARQDSES LAGLSNELDT LVRRFRT
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