| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0272 |
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| Symbol | |
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| ID | 4479180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 305555 |
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| End bp | 307471 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639724804 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_867921 |
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| Protein GI | 117918729 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00090491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000349734 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATATTGA ATAACCTTAC TATTAAGCAG AAAATCCTGC TGACAGTGAC ATTTGCTGTG
CTGCTGTCGA CCATACTCGT GGGCGTCCTC AGCCAACGCA GTGCAAAAAG CGTGGTACAG
CAGCGTATGC TCGGGTCGGA AATGCCCAGC CTAATGATGC AGATCCGCAA CAAGATTGAG
CTAGATATTT CGAGCTTAAT GAATGCCGCC GAACAACTCG CCAGCAGCCG CATGTTACTG
CAATGGCTTG AAAACGGTCG TCCGCAGGAG CAAGAACCGC AAGTCGTTGC CCAACTGAAG
GACATCACCC GCCAATATCA TTTGGCCCAA GCCTCCTACG CCGATAGACA AACCGCCGCC
TACTACACCC AAGATGGTTT TTTACGTGTA CTCACCCCTG CGCAGGATGG TTGGTTTTTT
GGTTATCGTG ACAGCGGCCA AGAGCGGATG CTTAACGTGT TTACCGAAGC CAATGGCGAA
GTAAAACTCT TTATTAATTA TCAGCAACCT AATGGCCGCG GACTCGTTGG CCTCGCCAAA
TCCCTCGATG ATATGGTGCG TCTACTAGGT TCCTTTAAGA TTGAAGAAAC TGGCTTTGTC
TACTTAGTCG ATGCTAAAGG TGAGGTAAAA CTGCATCCCG ACGCCAGTCA AATTGGCAAG
AGCAGCCTCA AGAGCTTGTA CTCGGGTGCG AATATCAGCT CATTGCTCAA TCGTAGCGAC
TTCAACCTGA TCGATACCCA AATACAAGGT GAAAACACTT TCGTAGCCAG CAGCTATATT
CCCTCCATGG ATTGGTATTT AGTGGCACAA GTGCCCGAAG CCGAAGTGTT CGCCCTGTTG
ACGGATGCCG CCTACCAGAT CTTAATTTGG ACCTTAATCA TTGCCGCGGG CTTTATCATG
CTGGCAATTG TGGTGGCCGG TTCAGTAAGC CGCCCTATCG CACAAGTCGC AGCCATGTTC
CGTGATATCG GCGAAGGAGA AGGCGATTTA CGTCAGCGCC TCCCCGTTAA AGGCGAAGAT
GAAATTGCCC AACTGGCACA AGGGTTTAAT AGCTTTATCA GCAAAATCCA AGACTCAGTG
ATTGAAGTTG CGCAGACCAG CGAACAGCTT GGCTTCTCGG CGAAGGATGT GTCGAATCAG
GCGCAGCAAA CCCTTGAAGA CAGCCATGAG CAAAAAGATC GCACTATGAT GGTTGTGACC
GCCATCAATG AGATGGGCGC AACGGTGAAT GAAATCGCCA GCAATGCCGC CCAAGCAGCT
GTTGCGGCCA AGGATGCCGA TACCGAATCC AATAGCGGCC AAGTGGTGGT GACCCGTGCT
CGGGATACCA TCAATCAACT CTCCCAAGAT GTGGAACAAG TCGGTGAAGT GATTGAATCC
CTTGCGACTC ATACCAAGTC TATCGGCGGC ATTCTCGATG TGATCCGCGC GATCTCTGAG
CAAACTAACC TGTTAGCGCT GAACGCCGCG ATTGAAGCCG CCCGTGCCGG TGAGGCGGGA
CGAGGCTTTG CCGTGGTAGC CGATGAAGTC CGTAATCTGG CATCGCGCAC CGCCGCATCG
ACCAACGAAG TCCAAGGAAT GATCGACAAG TTGCAATCCG AGGCCAGCCG AGCAGTGAAT
GCCATGGCCC AAAGCCGTGC GCGCTCCCAC GAAGGGGTGG CCGCCGTCGA TGAGGCCAGC
CAATCTCTGG TAGGCATTAG TGACCGTATT GGCCTGATCA GCGATATGAA CATTCAAGTC
GCAGCGGCGA CGGAAGAGCA ATCGACCGTA GTGGAAGACA TCAACCGTAA CGTGACCGAA
ATTAACGAGA TCACCCAGCG CACCGCCAGT ACGGCACAGG CTGCGGCACA GGCGAGCTTA
GCGCTAAACC AACTCGCCCA CCGCTTAGAC ACCTTAGTGG CGAAATTTAA GGTGTAA
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| Protein sequence | MILNNLTIKQ KILLTVTFAV LLSTILVGVL SQRSAKSVVQ QRMLGSEMPS LMMQIRNKIE
LDISSLMNAA EQLASSRMLL QWLENGRPQE QEPQVVAQLK DITRQYHLAQ ASYADRQTAA
YYTQDGFLRV LTPAQDGWFF GYRDSGQERM LNVFTEANGE VKLFINYQQP NGRGLVGLAK
SLDDMVRLLG SFKIEETGFV YLVDAKGEVK LHPDASQIGK SSLKSLYSGA NISSLLNRSD
FNLIDTQIQG ENTFVASSYI PSMDWYLVAQ VPEAEVFALL TDAAYQILIW TLIIAAGFIM
LAIVVAGSVS RPIAQVAAMF RDIGEGEGDL RQRLPVKGED EIAQLAQGFN SFISKIQDSV
IEVAQTSEQL GFSAKDVSNQ AQQTLEDSHE QKDRTMMVVT AINEMGATVN EIASNAAQAA
VAAKDADTES NSGQVVVTRA RDTINQLSQD VEQVGEVIES LATHTKSIGG ILDVIRAISE
QTNLLALNAA IEAARAGEAG RGFAVVADEV RNLASRTAAS TNEVQGMIDK LQSEASRAVN
AMAQSRARSH EGVAAVDEAS QSLVGISDRI GLISDMNIQV AAATEEQSTV VEDINRNVTE
INEITQRTAS TAQAAAQASL ALNQLAHRLD TLVAKFKV
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