Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0271 |
Symbol | |
ID | 4251167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 290711 |
End bp | 292627 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638116826 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_732408 |
Protein GI | 113968615 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.758035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000678809 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATATTGA ATAACCTAAC TATTAAGCAG AAAATTCTGC TGACAGTGAC ATTTGCTGTG CTGCTGTCGA CCGTACTCGT GGGCGTCCTC AGTCAGCGTA GTGCAAAAAG CGTGGTACAG CAGCGTATGC TCGGGTCGGA AATGCCCAGC CTAATGATGC AGATCCGCAA CAAGATTGAG CTGGATATTT CGAGCTTAAT GAATGCCGCC GAACAACTCG CCAGCAGCCG TATGTTACTG CAATGGCTTG AAAACGGTCG TCCACAGGAG CAAGAACCGC AAGTCGTTGC CCAGCTGAAG GACATCACCC GCCAATATCA TTTGGCCCAA GCCTCCTACG CCGATAGACA AACCGCAGCC TACTACACTC AGGATGGTTT TTTACGCGTA CTCACCCCAG CGCAGGATAG TTGGTTTTTT GGTTATCGCG ACAGCGGCCA AGAGCGGATG CTTAACGTCT TTACCGAAGC CAATGGCGAG GTAAAACTCT TTATCAACTA TCAGCAACCT AATGGCCGCG GACTCGTTGG CCTCGCCAAA TCCCTCGATG ATATGGTGCG CCTATTGGGC TCCTTTAAGA TTGAAGAAAC CGGCTTTGTT TACTTAGTCG ATGCCAAAGG CGAGATAAAA CTGCATCCCG ACGCCAGCCA AATTGGCAAG AGCAGCCTCA AGAGCTTGTA CTCAGGCGCC AATATCAGTT CATTACTCAA TCGTAATGAC TTCAACTTGA TCGATACCCA AATCCAAGGT GAAAACACCT TCGTAGCCAG CAGCTATATT CCCTCCATGG ATTGGTATCT CGTGGCACAA GTGCCTGAAG CCGAAGTGTT CGCCCTGCTA ACGGATGCCG CCTACCAGAT CTTAATTTGG ACCTTAATCA TTGCCGCGGG CTTTATCATG CTGGCGATTG TGGTGGCAGG TTCTGTAAGC CGCCCTATCG CACAAGTCGC GGCAATGTTC CGTGATATTG GCGAAGGTGA AGGCGATTTA CGCCAGCGCC TCCCCGTTAA AGGTGAAGAT GAAATTGCCC AGCTGGCACA AGGGTTTAAT AGCTTTATCA GCAAAATCCA AGACTCAGTG ATTGAGGTTG CACAGACCAG TGAACAGCTC GGCTTCTCGG CGAAGGATGT GTCTAATCAG GCGCAGCAAA CCCTTGAAGA CAGCCATGAG CAAAAAGATC GCACTATGAT GGTCGTGACT GCCATTAATG AGATGGGTGC CACGGTAAAT GAAATCGCCA GCAACGCCGC CCAAGCTGCT GTTGCGGCAA AAGATGCCGA TACCGAATCC AATAGCGGCC AAGTGGTGGT GACCCGTGCT CGGGATACCA TCAATCAACT CTCCCACGAT GTGGAACAAG TCGGCGAAGT AATTGAATCC CTCGCGACTC ATACCAAGTC TATCGGCGGC ATTCTCGATG TGATCCGCGC GATTTCGGAG CAAACCAACC TGTTAGCCCT AAACGCCGCG ATTGAAGCTG CACGTGCTGG TGAGGCGGGA CGAGGCTTTG CCGTGGTAGC CGATGAAGTC CGTAATCTAG CATCGCGCAC CGCCGCATCG ACCAACGAAG TCCAAGGTAT GATCGACAAG TTGCAATCCG AGGCCAGCCG AGCGGTGAAT GCCATGGCCC AAAGCCGTGC GCGCTCCCAC GAAGGGGTGG CCGCCGTCGA TGAGGCCAGC CAATCTCTGG TAGGCATTAG TGACCGTATT GGCCTGATCA GCGATATGAA CATTCAGGTG GCTGCAGCGA CGGAAGAGCA ATCGACCGTG GTAGAAGATA TCAACCGCAA CGTGACCGAA ATTAACGAGA TCACCCAGCG CACCGCCAGC ACGGCACAGG CTGCGGCACA GGCGAGCTTA GCGCTAAACC AACTCGCCCA CCGCTTAGAC ACCTTAGTGG CGAAATTTAA GGTGTAA
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Protein sequence | MILNNLTIKQ KILLTVTFAV LLSTVLVGVL SQRSAKSVVQ QRMLGSEMPS LMMQIRNKIE LDISSLMNAA EQLASSRMLL QWLENGRPQE QEPQVVAQLK DITRQYHLAQ ASYADRQTAA YYTQDGFLRV LTPAQDSWFF GYRDSGQERM LNVFTEANGE VKLFINYQQP NGRGLVGLAK SLDDMVRLLG SFKIEETGFV YLVDAKGEIK LHPDASQIGK SSLKSLYSGA NISSLLNRND FNLIDTQIQG ENTFVASSYI PSMDWYLVAQ VPEAEVFALL TDAAYQILIW TLIIAAGFIM LAIVVAGSVS RPIAQVAAMF RDIGEGEGDL RQRLPVKGED EIAQLAQGFN SFISKIQDSV IEVAQTSEQL GFSAKDVSNQ AQQTLEDSHE QKDRTMMVVT AINEMGATVN EIASNAAQAA VAAKDADTES NSGQVVVTRA RDTINQLSHD VEQVGEVIES LATHTKSIGG ILDVIRAISE QTNLLALNAA IEAARAGEAG RGFAVVADEV RNLASRTAAS TNEVQGMIDK LQSEASRAVN AMAQSRARSH EGVAAVDEAS QSLVGISDRI GLISDMNIQV AAATEEQSTV VEDINRNVTE INEITQRTAS TAQAAAQASL ALNQLAHRLD TLVAKFKV
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