Gene Pfl01_0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0450 
Symbol 
ID3712845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp510651 
End bp512588 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content62% 
IMG OID 
Productchemotaxis sensory transducer 
Protein accessionYP_346183 
Protein GI77456678 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCT GGCGTCGCAG TATTCAATGG CAGTTGATCC TCGGCATGGG CACCGCCCTG 
CTGGTCAGCA TTCTGATCGT GGTTGGCATT TATACCCTGG TGGTCAACCG CCTCGCCCAG
AGCTATCTGG TCGAACAGGC GCTGCCGTCG AGCATCGAAG CGACGCGCAA CGACATCGAA
CGAATCCTCG TTCAACCCCT CACCGCCGCC AAGGATATCG CCAGCAACAC CATGGTCCGC
GACTGGCTGG CCAATGGTGA GGACTCCGCC AAAACCGCGG GTTTCGCGCA GTATCTGGAA
GGCATCCGCG CCGAACACAA GGCTTTTACT GCTTTGATCA TCGGCACCGA ATCCAATCAC
TACATCACCG AAAAAGGCCT GGATCGCACC CTCAGTCGCG ACAAACCGGC CGATGCGTGG
TTCTACTCCT TCCTCGACAG CAATCAGCCG CGAACCTTGA ACATCGACAA CGACGGGGCC
ACCGGAGAGC TGGCGCTGTT CATCGATTTG AAGGTGGAGC AGGCCGGCAA AGTGGTCGGT
GTCGCGGGGC TCGGGCTGAG CATGAAAGAG CTGTCGGAGC TGATTCACAA CTTCAGCTTC
GGCGAGCGCG GGAAGGTCTA TCTCGTGCGT TCCGACGGTC TTATCCAGGT CCATCCCGAG
GCACAGTTCA GCGGCAAGCG CACCTTGAGC GAGCAGATCG GCGTCTCGGC AGCACAAGCG
GTCATGGGCC ATAAAGTCGC CGCCAACAGC AGCTTTCAGC GCGACGGCGA AGATTTCCTC
GCCTTCAGCC TGCCTTTGCG CGATCTCGGC TGGACCCTGG TGGCCGAAGT GCCACGGTCG
CAGATCTACG CCGAAGCCCG CCGGGCGATG TGGATGAGCA GCGGCATCGG CCTGGTGGTG
GCGCTGGTTT GCCTGGCGCT GGTGATCTGG CTGGCCCAGG GCTTGGTGCG ACCGATTCGT
CAGGTAACAG CTGCATTGGT AGCAATCGGT AGCGGTGGTG GAGATTTGAC TCATCGGTTA
GATTCCAGCC GCGCCGATGA ACTGGGCGAC CTCGCCCGGG GCTTCAACCG TTTCCTCGAC
AGCCAGCGCG GGATGATCGG CGAAGTGCTG ACCACCAGCG TGCGTCTGCG CGTTGCCGTG
GGCCAGGTGG CCAGGGTTGT GGATAACACC GCCGAGCGCT CCGGCCGCCA GCAGGAAATG
ACCGACATGG TTGCCACCGC CGTCCACGAA ATGGGCCTGA CCGTGCAGGA AATCGCCCAG
AACGCCGGTA ATGCGGCACT CGCCTCGCAA ACCGCCCGCG ATGAAGCGAT GCAGGCGCGG
GAAGTGGTCG GCGGCTCGAT TCGCCATATA GAAAGCATGT CCGATGAAAT TGGCGTCGCG
GCGGGCGCGG TGGGTGAGCT GGCGCATCAA GTGGCGTCGA TCGATCAGGT GCTGGCGGTG
ATTCGCGGGG TGTCCGAGCA GACCAACCTG CTGGCGTTGA ACGCTGCCAT CGAGGCTGCT
CGAGCCGGCG ATATGGGGCG TGGTTTTGCA GTGGTGGCCG ACGAGGTGCG GACATTGGCG
CGCCGGACTC AGGCGTCTAC CGACGAGATT CAGCAGATGA TCGGCAGCCT TAAACAGGGC
GCGGAGAATG CGGTGTCATC GATGCGCACC GGGCAGGCCG CGACGGGTAC CGGAGTCGAA
TCGAGCCAGC GTACCGGGGC GTCTTTGACG GCGATTACCG GGCAGGTCGA GCGCATCAGC
GACATGAACC ATCAGGTGGC GACAGCGACT GAGGAGCAGT CGGCGGTGAC CGAGGAGATC
AACCGCAACG TACAGGGCAT TTCCGATCTG GCCCGGGCGA CGGCGGGGGA GGTTCGGGCG
TGTCGTGAGG ATTGTCAGAT GTTGCAGCGG CTGGCGGATG ATCTGGCGCG GCAGATGGGT
GGGTTCAAGT TGAGCTGA
 
Protein sequence
MQFWRRSIQW QLILGMGTAL LVSILIVVGI YTLVVNRLAQ SYLVEQALPS SIEATRNDIE 
RILVQPLTAA KDIASNTMVR DWLANGEDSA KTAGFAQYLE GIRAEHKAFT ALIIGTESNH
YITEKGLDRT LSRDKPADAW FYSFLDSNQP RTLNIDNDGA TGELALFIDL KVEQAGKVVG
VAGLGLSMKE LSELIHNFSF GERGKVYLVR SDGLIQVHPE AQFSGKRTLS EQIGVSAAQA
VMGHKVAANS SFQRDGEDFL AFSLPLRDLG WTLVAEVPRS QIYAEARRAM WMSSGIGLVV
ALVCLALVIW LAQGLVRPIR QVTAALVAIG SGGGDLTHRL DSSRADELGD LARGFNRFLD
SQRGMIGEVL TTSVRLRVAV GQVARVVDNT AERSGRQQEM TDMVATAVHE MGLTVQEIAQ
NAGNAALASQ TARDEAMQAR EVVGGSIRHI ESMSDEIGVA AGAVGELAHQ VASIDQVLAV
IRGVSEQTNL LALNAAIEAA RAGDMGRGFA VVADEVRTLA RRTQASTDEI QQMIGSLKQG
AENAVSSMRT GQAATGTGVE SSQRTGASLT AITGQVERIS DMNHQVATAT EEQSAVTEEI
NRNVQGISDL ARATAGEVRA CREDCQMLQR LADDLARQMG GFKLS