More than 300 homologs were found in PanDaTox collection
for query gene Pfl01_0450 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  71.94 
 
 
645 aa  886    Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  71.32 
 
 
645 aa  882    Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  66.46 
 
 
643 aa  795    Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  100 
 
 
645 aa  1296    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  71.78 
 
 
645 aa  897    Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  71.63 
 
 
645 aa  884    Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  36.35 
 
 
640 aa  396  1e-109  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  35.51 
 
 
640 aa  394  1e-108  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  35.58 
 
 
641 aa  375  1e-102  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  35.09 
 
 
638 aa  353  7e-96  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  36.83 
 
 
638 aa  336  9e-91  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  34.82 
 
 
638 aa  333  8e-90  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  37.36 
 
 
641 aa  328  2.0000000000000001e-88  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  37.36 
 
 
638 aa  328  2.0000000000000001e-88  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  37.36 
 
 
638 aa  328  2.0000000000000001e-88  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  37.36 
 
 
638 aa  328  3e-88  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  35.91 
 
 
638 aa  326  9e-88  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  33.39 
 
 
636 aa  325  1e-87  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  37.07 
 
 
638 aa  324  2e-87  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  36.62 
 
 
642 aa  324  3e-87  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  34.31 
 
 
639 aa  321  3e-86  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  34.31 
 
 
638 aa  320  5e-86  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  36.46 
 
 
638 aa  317  4e-85  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  36.31 
 
 
638 aa  316  9e-85  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  36.31 
 
 
638 aa  315  1.9999999999999998e-84  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_011138  MADE_00464  methyl-accepting chemotaxis protein  33.64 
 
 
636 aa  313  3.9999999999999997e-84  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  34.57 
 
 
650 aa  311  2e-83  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_2239  chemotaxis sensory transducer  31.13 
 
 
648 aa  310  5.9999999999999995e-83  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  35.46 
 
 
636 aa  302  1e-80  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0552  putative methyl-accepting chemotaxis sensory transducer  31.47 
 
 
648 aa  292  1e-77  Shewanella amazonensis SB2B  Bacteria  normal  0.283806  decreased coverage  0.00439756 
 
 
-
 
NC_007953  Bxe_C1067  methyl-accepting chemotaxis sensory transducer  33.28 
 
 
634 aa  291  2e-77  Burkholderia xenovorans LB400  Bacteria  normal  0.318926  normal 
 
 
-
 
NC_008543  Bcen2424_3736  methyl-accepting chemotaxis sensory transducer  30.92 
 
 
620 aa  277  5e-73  Burkholderia cenocepacia HI2424  Bacteria  normal  0.455432  normal  0.0212994 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  42.64 
 
 
712 aa  277  5e-73  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  42.89 
 
 
712 aa  276  6e-73  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008061  Bcen_4628  methyl-accepting chemotaxis sensory transducer  30.92 
 
 
620 aa  276  6e-73  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_3785  methyl-accepting chemotaxis sensory transducer  30.88 
 
 
620 aa  275  2.0000000000000002e-72  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.0060774  normal  0.0147123 
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  31.14 
 
 
630 aa  270  8.999999999999999e-71  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  42.03 
 
 
637 aa  269  1e-70  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_007511  Bcep18194_B2357  methyl-accepting chemotaxis sensory transducer  31.08 
 
 
620 aa  265  2e-69  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3723  HAMP domain-containing protein  31.42 
 
 
628 aa  264  4.999999999999999e-69  Cupriavidus metallidurans CH34  Bacteria  normal  0.21159  normal  0.539738 
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  41.14 
 
 
545 aa  263  8e-69  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  30.94 
 
 
648 aa  263  8e-69  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  34.99 
 
 
629 aa  262  1e-68  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  33.92 
 
 
623 aa  261  2e-68  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008391  Bamb_5471  methyl-accepting chemotaxis sensory transducer  30.62 
 
 
620 aa  261  2e-68  Burkholderia ambifaria AMMD  Bacteria  normal  0.407039  normal 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  34.99 
 
 
629 aa  261  2e-68  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  37.39 
 
 
630 aa  261  3e-68  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.64 
 
 
630 aa  258  2e-67  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4997  methyl-accepting chemotaxis sensory transducer  30.31 
 
 
620 aa  258  2e-67  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.245568 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  36.55 
 
 
630 aa  258  3e-67  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  35.65 
 
 
630 aa  258  3e-67  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  35.64 
 
 
630 aa  258  3e-67  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  35.64 
 
 
630 aa  258  3e-67  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3618  methyl-accepting chemotaxis sensory transducer  30.46 
 
 
620 aa  256  6e-67  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0344374  normal 
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  31.8 
 
 
646 aa  256  8e-67  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  32.71 
 
 
632 aa  256  1.0000000000000001e-66  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  41.1 
 
 
716 aa  255  2.0000000000000002e-66  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  37 
 
 
713 aa  254  3e-66  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  36.76 
 
 
630 aa  254  4.0000000000000004e-66  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  36.76 
 
 
630 aa  254  5.000000000000001e-66  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  32.71 
 
 
629 aa  254  5.000000000000001e-66  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_008228  Patl_0604  methyl-accepting chemotaxis sensory transducer  28.35 
 
 
641 aa  253  7e-66  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.471742  n/a   
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  36.38 
 
 
627 aa  253  7e-66  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  43.59 
 
 
541 aa  252  1e-65  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  37.76 
 
 
714 aa  252  1e-65  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  38.13 
 
 
714 aa  251  2e-65  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  32.55 
 
 
632 aa  252  2e-65  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  32.37 
 
 
623 aa  251  4e-65  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  44.57 
 
 
634 aa  250  7e-65  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  31.14 
 
 
646 aa  250  7e-65  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  37.66 
 
 
548 aa  249  9e-65  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  32.03 
 
 
629 aa  249  1e-64  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.95 
 
 
630 aa  248  2e-64  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  43.8 
 
 
559 aa  248  2e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  46.2 
 
 
637 aa  248  3e-64  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  32.85 
 
 
626 aa  247  4.9999999999999997e-64  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  35.44 
 
 
630 aa  247  4.9999999999999997e-64  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  36.4 
 
 
634 aa  247  6e-64  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  44.8 
 
 
634 aa  246  9e-64  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  34.56 
 
 
624 aa  245  9.999999999999999e-64  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  32.36 
 
 
627 aa  244  1.9999999999999999e-63  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_002947  PP_0584  methyl-accepting chemotaxis transducer  31.33 
 
 
647 aa  244  3e-63  Pseudomonas putida KT2440  Bacteria  normal  0.77697  normal  0.644217 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  32.04 
 
 
626 aa  244  3e-63  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  33.71 
 
 
630 aa  244  3e-63  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  35.54 
 
 
555 aa  244  5e-63  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  36.64 
 
 
636 aa  244  5e-63  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  32.95 
 
 
631 aa  244  5e-63  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.51 
 
 
626 aa  242  2e-62  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0623  methyl-accepting chemotaxis sensory transducer  31.17 
 
 
647 aa  242  2e-62  Pseudomonas putida F1  Bacteria  normal  0.494937  normal 
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  32.29 
 
 
626 aa  241  2e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  32.51 
 
 
629 aa  241  2e-62  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  32.15 
 
 
628 aa  241  2e-62  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  38.8 
 
 
545 aa  241  2.9999999999999997e-62  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  42.69 
 
 
554 aa  240  5e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  33.4 
 
 
622 aa  240  5.999999999999999e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  30.3 
 
 
629 aa  240  6.999999999999999e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  34.03 
 
 
639 aa  240  6.999999999999999e-62  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.77 
 
 
623 aa  240  6.999999999999999e-62  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  43.1 
 
 
568 aa  239  8e-62  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3825  methyl-accepting chemotaxis sensory transducer  32.83 
 
 
623 aa  239  9e-62  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
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