Gene Pmen_2650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2650 
Symbol 
ID5107266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2906196 
End bp2907902 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content65% 
IMG OID640503894 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001188137 
Protein GI146307672 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGATC GTCCGGCGTG GCGGTCAGGC TCGACTAAGC TTTTGAAACA CGTATCGAGC 
TGGAGTGCCT TCATGCTACG CGCCTTCGCT GACCTGGGGT TTCGCTGGAA AATCGCTCTG
CCGATTCTGC TGCTGGCGGC CTTGCTGGTG ACCATGGGCG TGCTGGGCAT GCGCGGCATC
GCCCAGGTAG CCGAATCCAG CACCACCCTG ACCAATCGCC ATCTGCCGGC CATCAGTCTG
CTGCTCAACG CAGATCGTGA CCTCTACCAG GCCTTCGTCG CCGAGCGCAG CCTGCTCGAC
GAAAACGCTG AAGAGCATGC CGCCCAGTTG CGCAAGGTGC ATGCCGACAA TCTCCAGCAG
GCCTATGACC GCGTGCACAA GTTCGCCGCC ATGCAGCCCG GTAGCCAGGC GCTCGCCCTG
GTCAGCGAGT TCGACCGCGG CTTCGAACGC TGGAAGTCCA CGTCCCTGCG CGTACTGGAG
ATGAGCGCGG GCGATCCGGA AGCTGCCAGC CGGCTCAGTT TCGGCGACAG CGAGATGCAG
TTCGAAGAGG CGCGCAATGC CATCGACAAG CTTGGCGAGC TGGAGGACGA GGCGGCCAAT
TCAGTCGGTA CCGCCGCCAT TTCGCGCGGC GCCGCACTGG CCTGGCAGCA AGGTCTGATC
ATCGCCATCG GCCTGCTGGT GTGCCTGGTA CTGGTGATGG GTTTCCCCCT GCTGGTGACC
CGACCGTTGC ACAGCCTGCT GCATCGCATC GAGCAGATTG CCGATGGCGA CGGCGATCTG
CGTGTGCGTC TCGATGTGCT GTCGAGGGAC GAACTCGGCA AGCTCAGCCA TGCCTTCAAC
CGCTTTCTGG ACAAGTTGCA ACCGCTGATC AAGGAAGTCG GGCGCGTCAC CGGTGAGGTG
GCCGATTCGG CCAAGAGCCT GGCCGGCATG GCGGCGGCCA ATGATCGGCT GATCAGCAGT
GAGCACGCCG CGGTGGACCA GGTCAGCACA GCCGCTACCG AAATGAGCGT GGCGGTGCAT
GAAGTTGCAC GCAACGCGCA GAACGCCGCC GACGCGGCGC GGCACGCCGA AGTGCAGTCA
CGCGAGGGCG CGCAGGTGGT CGGTACGACC ATCCATTCGA TACGGCAGCT GGCGCAGGAG
GTGGAGAGCG CTTCCGACAC CATCCAGACC CTGGAGCAGG AAACCGCCAA CATCGGCGCG
GTGCTGGCGG TGATCAAGGG CATCGCCGAG CAGACCAACC TGCTGGCGCT CAACGCCGCC
ATCGAGGCAG CGCGGGCAGG GGAGCAGGGG CGCGGTTTTG CCGTGGTCGC CGATGAGGTG
CGGGCACTGG CTGCGCGCAC CCAGGAGTCG ACCAAGGACA TTCAGCAGAT GATCGAGCGC
TTGCAGATCG GCGTGCAGAA TGCGGTCAAG GCCACCCACT CCGGCAGCGC CCGCGCGCGG
CAGAGCGTGG AGCAGGCAGC CGGCGTCGAT CAGGCGCTGA GTGTGACCGG GGATTCGGTG
CAGCGTATCA ACGACATGGC CGCACAGATC GCCACCGCCT GCGAGCAGCA GAGCAGCGTC
ACCGAAGAGA TCGCGCGCAA CATCAGCGAC ATCCGCGACC TCTCCAACGA AGCGGCGCAG
ACCTCGGAGC AAAGCACCCA GGCCAGCCAG CGCCTCTCCG AACTGTCTAC CGATCTGGCT
CAGCTGGTAG GGCGTTTTCG CGTGTAG
 
Protein sequence
MRDRPAWRSG STKLLKHVSS WSAFMLRAFA DLGFRWKIAL PILLLAALLV TMGVLGMRGI 
AQVAESSTTL TNRHLPAISL LLNADRDLYQ AFVAERSLLD ENAEEHAAQL RKVHADNLQQ
AYDRVHKFAA MQPGSQALAL VSEFDRGFER WKSTSLRVLE MSAGDPEAAS RLSFGDSEMQ
FEEARNAIDK LGELEDEAAN SVGTAAISRG AALAWQQGLI IAIGLLVCLV LVMGFPLLVT
RPLHSLLHRI EQIADGDGDL RVRLDVLSRD ELGKLSHAFN RFLDKLQPLI KEVGRVTGEV
ADSAKSLAGM AAANDRLISS EHAAVDQVST AATEMSVAVH EVARNAQNAA DAARHAEVQS
REGAQVVGTT IHSIRQLAQE VESASDTIQT LEQETANIGA VLAVIKGIAE QTNLLALNAA
IEAARAGEQG RGFAVVADEV RALAARTQES TKDIQQMIER LQIGVQNAVK ATHSGSARAR
QSVEQAAGVD QALSVTGDSV QRINDMAAQI ATACEQQSSV TEEIARNISD IRDLSNEAAQ
TSEQSTQASQ RLSELSTDLA QLVGRFRV