| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3723 |
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| Symbol | |
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| ID | 4040694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 263355 |
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| End bp | 265241 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979146 |
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| Product | HAMP domain-containing protein |
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| Protein accession | YP_585864 |
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| Protein GI | 94312655 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.21159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.539738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGC TTCGCGGTAT GACAATTCAA CGCAAGCTCA TCCTGAGCAC AATCACCTGC
CTCCTGCTCG TTGTGACAAT GACCGCGATG CTCATCCTGT GGCAGATCAG CAAGGGGCTG
CAGGAGCGCG TGGTCGATCT GGAATTGCCG GCGATCGTCG GCGAGATTCG CAATGACATG
CTGCATCAGA TCGCACGCCC GTTGGCCGCC GCGCAGGCAA TGGCCGGCAA CACGATGCTG
CGTGACTGGG AGAGCAACGG ACTCGCGGAC GACTACGTGC CGACGTGGCG TCGCTACGCT
GCGGAGATCA AGTCACGCAA TCAGGCGGAC GCGGTCTTCT GGGTATCGGC CAGCCAGGGC
AAGTACCTCA CGGAGAAAGG CGTGGACCGC ACCGTGCAGG CGGATTCCGC CGGGGACAAA
TGGCTCTTCG ACTTTCTCTC ACGCGGCAAA CCCTACGAGC TGTCGCTGGA CAAGGATCGC
AATTCGGACA GCTACATGCT GTTCATCAAT GCGCGCGCGG AAGCCGGTAA TGGCAAGCTC
GCCGTGGCGG GTCTGGGGCT TTCCATCAAT CATCTGGCCG AGACGATCAA CGGATATCGC
CTGGGCAGGA CCGGCTCGAT CTTCCTGGCT CGCGCCGATG GCAACGTACT GATGCATCGC
GATGCGAGAC TGGCGGAGGC CGGCACGCCG CTGGCGGACC TGCCAGGCTT CACCACTGAT
GCCGCGCGGA CGCTGCTCGC GCGGCAGCCG TTCGCGCACA CGGAGGTTGA TGCCCCGGAA
GGCAAGCGAA TCGTTGCGGC ATCCTATGTG CCCGAGCTGG ACTTGTACGT GGTAGCGCAG
GTGCCCAAGT CCGAGGTTCT CGAAGAGATT CGCCACTCGT CGATCATCGC GGCCGTGACC
GCGGGCCTGT CGGGCAGCCT GCTCGGCGTC ATCGTGCTCT ATTTCGTGAT CCGTGCGCTG
GTGGCGCCGA TCGGTCGCGT GGCCAGCGCG CTCGACGCGA TCGCCACGGG CAACGGTGAC
CTGACCCAGC GGCTGCCGGT GGACTCGCAG GATGAGGTTG GCCGGCTTGC GGATGCCTTC
AACCGCTTCG TCGCATCACT GAATCGCACG ATCGGAGATG TTCGACAAGG CGTGGTGGCC
ATCGCGGATG CGACACGCGA AATCGCGCAG GGCAATCACG ACCTGTCCAC CCGCACGGAG
AATCAGGCGG CGGGCGTGGA GGAAACCGCC TCCGCCACCG AACAGCTCAC GGCCACCGTG
GCCACCAACG CGGACACCGC GCGCCGCGCG AGCGCGCTGG CAGCCTCGGT ATCCATGGAC
GTGCGCCGCA GCGGCGAGAT GATGACCAAC GCGGTATCGA CCATGGAAAC GATCACGCAT
AGCGCGGGCC AGATGTCGAG CATCATCGAC GCCATCGAGG GCATCGCATT CCAGACGAAC
ATCCTGGCGC TCAATGCAGC CGTGGAGGCC GCGCGTGCCG GCGAGCATGG TCGCGGCTTT
GCCGTGGTGG CGGGAGAAGT ACGGGGACTG GCACAGCGCT CGGCAAACGC CGCCAAGGAC
ATCAAGACGC TGATCGTCGG CACCGAGGAA GCCGTTCGTA CCGGACGCTC GCTCGTCAAT
GAAGCCGGCG ATGCCATGCA GCAGATCGTG CCGGCGATGC AGCAGGTCAG CACGCTGGTG
GAAGAGATCG CGGAGGCCAG CGGCGAACAG AGCCGCGGCC TGGGCGAAAT CAATCTTGCG
ATTACCGAGA TGGACAGCAC CAACCAGCAG AATGCCTCGC TGGTGGAGCA GGCGGCCGCC
GCCGCGAAAT CGCTCGAGGA TCAGGCGACC GTGCTCAATC GCGTGGTCGC CGTGTTCAAG
CTGGACGAAC GCCTGCTGCA GGCCTGA
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| Protein sequence | MRLLRGMTIQ RKLILSTITC LLLVVTMTAM LILWQISKGL QERVVDLELP AIVGEIRNDM
LHQIARPLAA AQAMAGNTML RDWESNGLAD DYVPTWRRYA AEIKSRNQAD AVFWVSASQG
KYLTEKGVDR TVQADSAGDK WLFDFLSRGK PYELSLDKDR NSDSYMLFIN ARAEAGNGKL
AVAGLGLSIN HLAETINGYR LGRTGSIFLA RADGNVLMHR DARLAEAGTP LADLPGFTTD
AARTLLARQP FAHTEVDAPE GKRIVAASYV PELDLYVVAQ VPKSEVLEEI RHSSIIAAVT
AGLSGSLLGV IVLYFVIRAL VAPIGRVASA LDAIATGNGD LTQRLPVDSQ DEVGRLADAF
NRFVASLNRT IGDVRQGVVA IADATREIAQ GNHDLSTRTE NQAAGVEETA SATEQLTATV
ATNADTARRA SALAASVSMD VRRSGEMMTN AVSTMETITH SAGQMSSIID AIEGIAFQTN
ILALNAAVEA ARAGEHGRGF AVVAGEVRGL AQRSANAAKD IKTLIVGTEE AVRTGRSLVN
EAGDAMQQIV PAMQQVSTLV EEIAEASGEQ SRGLGEINLA ITEMDSTNQQ NASLVEQAAA
AAKSLEDQAT VLNRVVAVFK LDERLLQA
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