Gene VEA_001073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001073 
Symbol 
ID8559386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1218326 
End bp1220212 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content49% 
IMG OID646408744 
ProductN-acetylglucosamine regulated methyl-accepting chemotaxis protein 
Protein accessionYP_003288223 
Protein GI262396370 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAAA ATCTATCATT AAAAAACAAA CTGGCGATCT CTGCCAGTGC TGCCATCATT 
CTCGGGGGAG TGCTGGTAGA AGGGCTGTCT TTTCGAGATT CATTAAACAG ACTGGATGTC
GAAGTCGCGC AACGACTAGA AAGCACCAGC GCATCTTACA ATCAATACGT AAAGGACTGG
TTACTCTCAA AAGAGCGAGC ACTGACGTCA CTCTCTTCCG ATTCAGAAAA GCGTTCTCTA
GTTACGCACT TGAAACAAGT CCGAGACTCT GGCGCGTTTG ATAACGTCTT TCTCGCTTAC
CCAGACGGCT CACAAGACAA CGCTAATGGG GTGGTTTTGC CACCAGGTAA TAACGACCCA
CGCAAGTGGG GTTGGTACAC CAACGCCATT GCCAATCCAT CGAAAGTCTT TATGGATAAC
CCAACCGTCG CAGCGGCCAC GGGGGCCAAC GTCGTGTCGC TTGGTAAAGC ACTGCAACTA
CATGGTCAAA CCGTCGTTCT GGGTGCAGAT GTCGAAATTG GAGATATTTT AAACAGCCTC
AACCAAGTGA TCCTACCGGG TGAAGGCTAT ATGTTTATTG CCAATGAACA GGGCAATATT
TTCACCCATA ACGACGGTAA GCTGCTGAAC CAACCTGTTA GCAAGCTAGG CCTAAACAAC
AGCGATATTA CCTCTGCCGC ACGTTCCGGC ACAGAGCGTC GTGTCTCGAT TAACAACACC
GAATATGTGG TTTACGCGCG CCATATTGAG GGCACCAAAC TCACAACGGT TACAGTGTTA
GATCAAAACT CGTTAGTTGC CCCTCTCTAC GAAGCCGTTT GGGATCAAAT CATCGCAACC
ACTATCGTCG TCGTCATCTG TGTGGCTTTG TTTAACCTGC TATGTAACAT CTTGTTCCGT
CCGCTCTACA ATGTTTCGAA TGCGCTCGCG CAAATCGCCA ACGGTAGCGG TGACCTAACT
CAACGCATCA AAGTAGAAAA CCGTGACGAA GTTGGTGAAC TGGCTGAAAA CTTCAACCAG
TTCGTTGAAA GTTTGCAGCA ACTTATTGGC CACATTCGTC AACAAGCGGA AGAACTGAGC
CAACAATCGG AGCTGAGCAC GACTCGCGCA AATCAATCGG TTTCTGATCT GAACCATCAG
CAACAAGAAA TCACTATGGT GGCAACCGCT GTGACCGAAA TGGCATCGGC AACGCAAGAG
ATTGCAGCGC ATGCAGAGCA GACGGCCAAA GCCGCACAAG ACTCTTCAGC GAGCACACAA
AATGGTCATG AATTGGTGAT CAACTCCAAA TCGTCCATCA ATAATTTGTC TTCCGAAGTC
AACCAAGCGA GCGTTGTCAT CGGTGAGCTC AATCAGCACG CGCAAGACAT CTCAACCGTG
CTATCAACGA TTCGAGACAT CGCGGAGCAA ACCAACTTAC TGGCTCTGAA TGCGGCGATT
GAAGCGGCGC GTGCAGGTGA ACAAGGCCGC GGTTTTGCCG TTGTTGCAGA CGAGGTTCGC
GTGCTATCAC AACGCACACA CACCTCAACC GAAGAGATTC GCTCGACGAT CGAGACTTTG
CAACAGACCA CACAACGCGC TGTGACCATC ATGGATACAA GCTCTCAGCT CGCGCAAGGT
TCGGTGGAAG ATGCCGATCG CGCAGCACTG GCTCTGGATG AAATCAACGC GGCCGTTGCG
TTGATCAGCG ATATGGCAAC GCAAATTGCA ACCGCAGCTG AAGAACAAAC TCACGTAACC
AATGAAATCA CGCAAAACGT CACGTCAATT AAAGATGTGA CCGATCAGTT GGTGGTTGGC
GCAGCAGAAT CGATGAATCA ATCTGCTGAG TTGAAATCGC AGGCAGAAGA TCTCAACTCG
AAAGTGGCGA CGTTTAAACT GGCTTAA
 
Protein sequence
MFKNLSLKNK LAISASAAII LGGVLVEGLS FRDSLNRLDV EVAQRLESTS ASYNQYVKDW 
LLSKERALTS LSSDSEKRSL VTHLKQVRDS GAFDNVFLAY PDGSQDNANG VVLPPGNNDP
RKWGWYTNAI ANPSKVFMDN PTVAAATGAN VVSLGKALQL HGQTVVLGAD VEIGDILNSL
NQVILPGEGY MFIANEQGNI FTHNDGKLLN QPVSKLGLNN SDITSAARSG TERRVSINNT
EYVVYARHIE GTKLTTVTVL DQNSLVAPLY EAVWDQIIAT TIVVVICVAL FNLLCNILFR
PLYNVSNALA QIANGSGDLT QRIKVENRDE VGELAENFNQ FVESLQQLIG HIRQQAEELS
QQSELSTTRA NQSVSDLNHQ QQEITMVATA VTEMASATQE IAAHAEQTAK AAQDSSASTQ
NGHELVINSK SSINNLSSEV NQASVVIGEL NQHAQDISTV LSTIRDIAEQ TNLLALNAAI
EAARAGEQGR GFAVVADEVR VLSQRTHTST EEIRSTIETL QQTTQRAVTI MDTSSQLAQG
SVEDADRAAL ALDEINAAVA LISDMATQIA TAAEEQTHVT NEITQNVTSI KDVTDQLVVG
AAESMNQSAE LKSQAEDLNS KVATFKLA