Gene VEA_001073 details

Gene Information

• Locus tag: VEA_001073
• ID: 8559386
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013457
• Strand: -
• Start bp: 1218326
• End bp: 1220212
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 646408744
• Product: N-acetylglucosamine regulated methyl-accepting chemotaxis protein
• Protein accession: YP_003288223
• Protein GI: 262396370
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCAAAA ATCTATCATT AAAAAACAAA CTGGCGATCT CTGCCAGTGC TGCCATCATT 
CTCGGGGGAG TGCTGGTAGA AGGGCTGTCT TTTCGAGATT CATTAAACAG ACTGGATGTC 
GAAGTCGCGC AACGACTAGA AAGCACCAGC GCATCTTACA ATCAATACGT AAAGGACTGG 
TTACTCTCAA AAGAGCGAGC ACTGACGTCA CTCTCTTCCG ATTCAGAAAA GCGTTCTCTA 
GTTACGCACT TGAAACAAGT CCGAGACTCT GGCGCGTTTG ATAACGTCTT TCTCGCTTAC 
CCAGACGGCT CACAAGACAA CGCTAATGGG GTGGTTTTGC CACCAGGTAA TAACGACCCA 
CGCAAGTGGG GTTGGTACAC CAACGCCATT GCCAATCCAT CGAAAGTCTT TATGGATAAC 
CCAACCGTCG CAGCGGCCAC GGGGGCCAAC GTCGTGTCGC TTGGTAAAGC ACTGCAACTA 
CATGGTCAAA CCGTCGTTCT GGGTGCAGAT GTCGAAATTG GAGATATTTT AAACAGCCTC 
AACCAAGTGA TCCTACCGGG TGAAGGCTAT ATGTTTATTG CCAATGAACA GGGCAATATT 
TTCACCCATA ACGACGGTAA GCTGCTGAAC CAACCTGTTA GCAAGCTAGG CCTAAACAAC 
AGCGATATTA CCTCTGCCGC ACGTTCCGGC ACAGAGCGTC GTGTCTCGAT TAACAACACC 
GAATATGTGG TTTACGCGCG CCATATTGAG GGCACCAAAC TCACAACGGT TACAGTGTTA 
GATCAAAACT CGTTAGTTGC CCCTCTCTAC GAAGCCGTTT GGGATCAAAT CATCGCAACC 
ACTATCGTCG TCGTCATCTG TGTGGCTTTG TTTAACCTGC TATGTAACAT CTTGTTCCGT 
CCGCTCTACA ATGTTTCGAA TGCGCTCGCG CAAATCGCCA ACGGTAGCGG TGACCTAACT 
CAACGCATCA AAGTAGAAAA CCGTGACGAA GTTGGTGAAC TGGCTGAAAA CTTCAACCAG 
TTCGTTGAAA GTTTGCAGCA ACTTATTGGC CACATTCGTC AACAAGCGGA AGAACTGAGC 
CAACAATCGG AGCTGAGCAC GACTCGCGCA AATCAATCGG TTTCTGATCT GAACCATCAG 
CAACAAGAAA TCACTATGGT GGCAACCGCT GTGACCGAAA TGGCATCGGC AACGCAAGAG 
ATTGCAGCGC ATGCAGAGCA GACGGCCAAA GCCGCACAAG ACTCTTCAGC GAGCACACAA 
AATGGTCATG AATTGGTGAT CAACTCCAAA TCGTCCATCA ATAATTTGTC TTCCGAAGTC 
AACCAAGCGA GCGTTGTCAT CGGTGAGCTC AATCAGCACG CGCAAGACAT CTCAACCGTG 
CTATCAACGA TTCGAGACAT CGCGGAGCAA ACCAACTTAC TGGCTCTGAA TGCGGCGATT 
GAAGCGGCGC GTGCAGGTGA ACAAGGCCGC GGTTTTGCCG TTGTTGCAGA CGAGGTTCGC 
GTGCTATCAC AACGCACACA CACCTCAACC GAAGAGATTC GCTCGACGAT CGAGACTTTG 
CAACAGACCA CACAACGCGC TGTGACCATC ATGGATACAA GCTCTCAGCT CGCGCAAGGT 
TCGGTGGAAG ATGCCGATCG CGCAGCACTG GCTCTGGATG AAATCAACGC GGCCGTTGCG 
TTGATCAGCG ATATGGCAAC GCAAATTGCA ACCGCAGCTG AAGAACAAAC TCACGTAACC 
AATGAAATCA CGCAAAACGT CACGTCAATT AAAGATGTGA CCGATCAGTT GGTGGTTGGC 
GCAGCAGAAT CGATGAATCA ATCTGCTGAG TTGAAATCGC AGGCAGAAGA TCTCAACTCG 
AAAGTGGCGA CGTTTAAACT GGCTTAA 

 

Protein sequence

MFKNLSLKNK LAISASAAII LGGVLVEGLS FRDSLNRLDV EVAQRLESTS ASYNQYVKDW 
LLSKERALTS LSSDSEKRSL VTHLKQVRDS GAFDNVFLAY PDGSQDNANG VVLPPGNNDP 
RKWGWYTNAI ANPSKVFMDN PTVAAATGAN VVSLGKALQL HGQTVVLGAD VEIGDILNSL 
NQVILPGEGY MFIANEQGNI FTHNDGKLLN QPVSKLGLNN SDITSAARSG TERRVSINNT 
EYVVYARHIE GTKLTTVTVL DQNSLVAPLY EAVWDQIIAT TIVVVICVAL FNLLCNILFR 
PLYNVSNALA QIANGSGDLT QRIKVENRDE VGELAENFNQ FVESLQQLIG HIRQQAEELS 
QQSELSTTRA NQSVSDLNHQ QQEITMVATA VTEMASATQE IAAHAEQTAK AAQDSSASTQ 
NGHELVINSK SSINNLSSEV NQASVVIGEL NQHAQDISTV LSTIRDIAEQ TNLLALNAAI 
EAARAGEQGR GFAVVADEVR VLSQRTHTST EEIRSTIETL QQTTQRAVTI MDTSSQLAQG 
SVEDADRAAL ALDEINAAVA LISDMATQIA TAAEEQTHVT NEITQNVTSI KDVTDQLVVG 
AAESMNQSAE LKSQAEDLNS KVATFKLA