Gene PA14_56000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_56000 
SymbolpctA 
ID4382588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4998702 
End bp5000591 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content66% 
IMG OID639327101 
Productchemotactic transducer PctA 
Protein accessionYP_792654 
Protein GI116052343 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0512673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAA GTCTGAAGTT CAGCCACAAG ATCCTCCTCG CGGCCTCCCT CGTGGTGTTC 
GCCGCTTTCG CACTGTTCAC CCTCTACAAC GATTACCTGC AGCGCAACGC GATCCGCGAG
GACCTCGAAA GCTACCTGCG GGAAATGGGT GACGTGACCT CCAGCAACAT CCAGAACTGG
CTCGGTGGCC GTCTGTTGCT GGTCGAGCAG ACCGCCCAGA CCCTGGCCCG CGACCACAGC
CCGGAAGCCG TCAGCGCCCT GCTCGAACAG CCGGCCCTGA CCTCGACCTT CAGCTTCACC
TACCTCGGCC AGCAGGACGG CGTCTTCACC ATGCGCCCGG ACAGCCCGAT GCCGGCCGGC
TACGATCCGC GCAGCCGGCC CTGGTACAAG GACGCCGTAG CGGCCGGCGG CCTGACCCTG
ACCGAGCCCT ACGTCGACGC CGCCACCCAG GAACTGATCA TCACCGCGGC GACGCCGGTG
AAGGCCGCCG GCAACACCCT CGGCGTGGTG GGCGGCGACC TCAGCCTGAA GACCCTGGTA
CAGATCATCA ATTCGCTGGA CTTCAGCGGC ATGGGCTACG CCTTCCTGGT CAGCGGCGAC
GGCAAGATCC TGGTGCACCC GGACAAAGAG CAGGTGATGA AGACCCTGAG CGAGGTCTAC
CCGCAGAACA CGCCGAAGAT CGCCACCGGT TTCAGCGAGG CCGAATTGCA CGGGCATACC
CGCATCCTCG CCTTTACCCC GATCAAGGGC CTGCCTTCGG TGACCTGGTA CCTGGCGCTG
TCCATCGACA AGGACAAGGC CTACGCCATG CTCAGCAAGT TCCGCGTCTC GGCCATCGCC
GCCGCGCTGA TCTCCATCGT CGCCATCCTG GTCCTGCTCG GCCTGCTGAT CCGCCTGCTG
ATGCAGCCGC TGCACCTGAT GGGTCGTGCC ATGCAGGACA TCGCCCAGGG CGAGGGCGAC
CTGACCAAGC GCCTCGCCGT GACCAGCCGC GATGAATTCG GCGTGCTCGG CGATGCCTTC
AACCAGTTCG TCGAGCGGAT CCATCGCTCG ATCCGGGAAG TCGCCGGGAC CGCGCACAAA
CTGCACGACG TCTCGCAACT GGTGGTGAAC GCCTCGAACT CTTCGATGGC CAACTCCGAC
GAGCAGTCCA ACCGCACCAA CAGCGTCGCC GCGGCGATCA ACGAACTCGG CGCCGCCGCC
CAGGAAATCG CCCGCAACGC CGCCGATGCC TCGCACCATG CGTCCGACGC CAACCACCAG
GCCGAAGACG GCAAGCAGGT GGTCGAGCAG ACCATCCGCG CGATGAACGA GCTTTCCGAG
AAGATCAGCG CCTCCTGCGC CAACATCGAG GCCCTCAACA GTCGCACGGT GAACATCGGC
CAGATCCTCG AGGTGATCAA GGGCATCTCC GAGCAGACCA ACCTGCTCGC CCTCAACGCC
GCCATCGAAG CCGCCCGCGC CGGCGAGGCC GGGCGCGGCT TCGCGGTGGT CGCCGACGAG
GTGCGCAACC TGGCCCATCG CGCCCAGGAA TCGGCGCTGC AGATCCAGAA GATGATCGAA
GAGCTGCAAG TCGGCGCCCG CGAGGCGGTG GCCACCATGA CCGAGAGCCA GCGCTACAGC
CTGGAGAGCG TGGAGATCGC CAACCGTGCC GGCGAAAGCC TGGGCAGCGT GACCCGGCGG
ATCGGCGAGA TCGACGGGAT GAACCAGTCG GTGGCCACCG CCACCGAGGA ACAGACCGCG
GTGGTCGACT CGCTGAACAT GGACATCACC GAGATCAACA CCCTCAACCA GGAAGGCGTG
GAGAACCTCC AGGCCACCCT GCGCGCCTGC GGCGAGCTGG AAACCCAGGC CGGGCGCCTG
CGCCAACTGG TGGACAGCTT CAAGATCTGA
 
Protein sequence
MIKSLKFSHK ILLAASLVVF AAFALFTLYN DYLQRNAIRE DLESYLREMG DVTSSNIQNW 
LGGRLLLVEQ TAQTLARDHS PEAVSALLEQ PALTSTFSFT YLGQQDGVFT MRPDSPMPAG
YDPRSRPWYK DAVAAGGLTL TEPYVDAATQ ELIITAATPV KAAGNTLGVV GGDLSLKTLV
QIINSLDFSG MGYAFLVSGD GKILVHPDKE QVMKTLSEVY PQNTPKIATG FSEAELHGHT
RILAFTPIKG LPSVTWYLAL SIDKDKAYAM LSKFRVSAIA AALISIVAIL VLLGLLIRLL
MQPLHLMGRA MQDIAQGEGD LTKRLAVTSR DEFGVLGDAF NQFVERIHRS IREVAGTAHK
LHDVSQLVVN ASNSSMANSD EQSNRTNSVA AAINELGAAA QEIARNAADA SHHASDANHQ
AEDGKQVVEQ TIRAMNELSE KISASCANIE ALNSRTVNIG QILEVIKGIS EQTNLLALNA
AIEAARAGEA GRGFAVVADE VRNLAHRAQE SALQIQKMIE ELQVGAREAV ATMTESQRYS
LESVEIANRA GESLGSVTRR IGEIDGMNQS VATATEEQTA VVDSLNMDIT EINTLNQEGV
ENLQATLRAC GELETQAGRL RQLVDSFKI