| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2220 |
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| Symbol | |
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| ID | 3367735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2579677 |
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| End bp | 2581617 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652570 |
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| Product | histidine kinase, HAMP region:Cache: chemotaxis sensory transducer |
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| Protein accession | YP_235301 |
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| Protein GI | 66045460 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.071358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.520396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCA AACAAAAATT GACGTGGGCG TTCGCAGTCA TTGCGTGCTT GCCCATATTA
GTCGTCGCCG CCATCGTGGT CGTGAACCTG CGTGACAAGG CGACCAGTGA TTTCGTGGAC
AGCAGCGCGC GTGAAATTCG CCAGGTCGAC AACGCCATGC AGCTGTTTTT CGACGGCATT
ACGCAGAACG TCAATTACAT CGCGGCGCAC CCGCTGATCG CCGGGGCGAG CGACGATTTC
CGCAACTACA TGGGCGCTAC GCCTCCTCCG CAGTCCGAGA ATGACAGGCA GGCGACCGAG
CTGTTCGCCA GTATCGCCAA GGCTCACCCG GCCTACTCCT ACGTCTCTTA TGGTCTGATC
AACGGCAGCT ACATCATGAC GCCGGAAGAC CCGAAAATGA GCAACTACGA CCCGCGTGTG
CGGCCGTGGT ACAAGACGGC AATGGCCAAT GCCGGCAAGA CTGTGCGCAG CGATGCCTAT
TACTGGGCCA ACGACGATGC TGTACTGGTC AGCACCATCC GGGCGATTCC CAACAAACTG
GGCAACCCTG GCGGCGTGGT CAATATCGAC GTATCGCTCA AGCAGCTGAC CAACATCGTC
AAGCAGATCA AACTGGGCGA AAGCGGCTAT CTGATGCTGA TGGAAAAGAA CGGCACGGTG
CTGGTCGATC CCAAACAGCC CGAGCACAAT TTCAAGAAAC TGGGTGAACT GGGCGACGGC
TTCAGCGAGC TGGCGAAAAC CGCCAGTGGT CTGGTCGAGG TGACACTCAA CGGCGAACGT
TACATGGCCA ACGTTTACTC GTCCGAACAA CTGGGCTGGA ACTTCATCGG CCTGATCAAA
CAGGACGAAG TGATGGCCTC GGCCACCCGC CTGACCTGGT TGATCGGCAT CATCGCGGCG
GTGCTGGCGG TGGTCTTTGC GATTGTCGGT GCCAGTTTTG CCCGCGTTAT CGTGCGTCCG
ATCCACAGCG TTTCCAGCGG CCTGGAAGGC ATCGCGGGCG GTGAAGGCGA TCTGACTCAG
AACCTCGCCG TGCGCGGCAA GGATGAAACC GCGCAACTGG CGGGCTGGTT CAACAAGTTC
CTGACCGCGA TTCGCAGCCT GATCCAGCAC ATCGGTCAGG CCGCCGGGAA GATTCTCGAA
GCCTCACACA GCTCGACACG TGTCTCCAAC GACATGGCCG AAGCTGCTGG CCGGCAGCGC
GAAGCGGTGG ATATGGTCTC CACGGCGTTT CATGAAATGG TCGCCACCTC CAATGAAGTC
GCCCGCTCCT GCAGCCAGGC CGCCGACTCG GCAGACAACG GTCAGCAACA GGCGCGTGAA
GGTCAGCGGC AGATCGACGA TGCGGTGCGC AGCGTCGACC AGCTCAGCGA AGAACTCACC
CGCTCGGCCA AGGACATGAC GCAACTGGAA AAAGACAGCG CAGGCATTCA GTCGATCCTC
AACACCATCC GCTCGATTGC CGAGCAGACC AACCTGCTGG CGCTCAACGC CGCCATCGAG
GCAGCACGTG CGGGCGAACA GGGCCGCGGC TTCGCCGTCG TAGCCGACGA AGTCCGCGCA
CTGGCCAAAC GCACCTCGGA CTCGACCGCC GAAATCGACA GCCTGCTGGG CAACCTGGCC
AAACGTACTG CCTCGGTGGC GCAACAGATG CATGCCAGCC TCGACGTGTC GCAGCAGTCG
GTGACCAAGA TCGGACAGGC ACGCAGCAGC TTCGGGCAAA TCCGTGAGTC AGTGGATGTG
ATTCGCGACA TGAACACCCA GATCGCAACT GCCGCCGAAG AACAGCATCA GGTGGCCGAA
GACATCAACC GGCACATCAG CCAGATCCAT GGTGATGCGC AGTTGATCGC TCAACTCTCG
GACTCGGCCC GCGCGGATTC CAGAAGTCTG GAGATGCTGT CCAGCGAACT GGACGGCCTG
GTACGCAAGT TCAAGACCTG A
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| Protein sequence | MNIKQKLTWA FAVIACLPIL VVAAIVVVNL RDKATSDFVD SSAREIRQVD NAMQLFFDGI
TQNVNYIAAH PLIAGASDDF RNYMGATPPP QSENDRQATE LFASIAKAHP AYSYVSYGLI
NGSYIMTPED PKMSNYDPRV RPWYKTAMAN AGKTVRSDAY YWANDDAVLV STIRAIPNKL
GNPGGVVNID VSLKQLTNIV KQIKLGESGY LMLMEKNGTV LVDPKQPEHN FKKLGELGDG
FSELAKTASG LVEVTLNGER YMANVYSSEQ LGWNFIGLIK QDEVMASATR LTWLIGIIAA
VLAVVFAIVG ASFARVIVRP IHSVSSGLEG IAGGEGDLTQ NLAVRGKDET AQLAGWFNKF
LTAIRSLIQH IGQAAGKILE ASHSSTRVSN DMAEAAGRQR EAVDMVSTAF HEMVATSNEV
ARSCSQAADS ADNGQQQARE GQRQIDDAVR SVDQLSEELT RSAKDMTQLE KDSAGIQSIL
NTIRSIAEQT NLLALNAAIE AARAGEQGRG FAVVADEVRA LAKRTSDSTA EIDSLLGNLA
KRTASVAQQM HASLDVSQQS VTKIGQARSS FGQIRESVDV IRDMNTQIAT AAEEQHQVAE
DINRHISQIH GDAQLIAQLS DSARADSRSL EMLSSELDGL VRKFKT
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