Gene PputW619_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0425 
Symbol 
ID6109333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp461894 
End bp463786 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content63% 
IMG OID641620181 
Productmethyl-accepting chemotaxis sensory transducer with Cache sensor 
Protein accessionYP_001747299 
Protein GI170719611 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.461628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA ATCTCAAGTT CAGCCACAAG ATCCTGCTGG CCGCCGCCCT GGTGGTGGCC 
GTCGCCTTTA CCTGTTTCGT GCTGTTCAAC GACTACCGCC AGCGCCAGTC CCTGCGCAGC
GATACACAGA CCAACCTGCA GGACCTCGGC CGCCTCACCG CAGGCAACAT CCGCACCTGG
CTCGACAGCC GCAAGCAGTT GCTGGCCTCG CTGGCCCAGC AGATTGCCGC CGATGGGCCG
GGCAAGGCCA GCCTCGACAG AAGCCTGGCA CTGCCGGTAT ACGCCAGCAA TTTCCAGCTC
ACCTATTTCG GCGGCCAGGA CGGCAGCATG CAGTCGGTGC CGGTCGGCAA CCGCGCCGCC
GACTATGATC CTCGTGCCCG CGGCTGGTAC AAGGCAGCCA GCGCAGGCAG CGAGACCATC
GTCACCGAAC CGTACATTTC GGCTTCTGCC GGCAAACTGG TCATCACCCT GGCAACCCCC
GTGCAGCAAG GGGGCCGGCT GATTGGCGTC AGCGGCGTGG ACACCGACCT GCAAACCATC
AGCAATCTGA TCAACACGCT CGACTTCGAT GGCCACGGCC ACGCCTTCAT CGTCAACGGC
GAAGGCAAGA TCCTGATCCA CCCCAAGGCC GACCTGGCAC TCAAAACCTT GGCGGATGTC
TACCCAGGCG ACACACCGCA CATCAGCAGC GGCCTCAAGG AAGTCGAGCT GGATGGGCGC
AAGCAGTTCA TCAGTTTCAC CCACGTCGAC GGCGTGCCTT CAGCGGACTG GTACGTGGCC
CTCGTGGTCG ACCAGGACGC CGCCTTCGCC ATGCTCAGCG AGCTGCGTAC CTCGGCCATC
GTCGCGACGC TGATCGCGAT ACTGGTCATC ATCGCCCTGC TCGGCCTGCT GATCCGCGTG
TTGATGGAGC CCTTGCACCT GATGGGTCGC GCCATGCATG ACATTGCCGA AGGCGAAGGT
GACCTGACCC GGCGCTTGGC CATCCACGCG CAGGACGAGT TCGGCAGCCT TGGCCAGTCG
TTCAACCGTT TCGTCGAGCG TATTCACGAG TCGATACGCG AAGTGGCCTC GGCCACTGGC
CAGGTCAACG CGGTGGCCAC GCAGGTGGTG AGCGCCTCGA ATGCCTCGAT CCACAATGCC
GACCAGCAGT CCAGCCGAAC CAACAGCGTG GCCGCGGCCA TCAACCAGCT GGGTGCCGCA
GCCCAGGAGA TCGCCCAGAA CGCAGCGCTG GCTTCGCAAC ATTCCAGCGA GGCACGCGGC
CTGGCCGAAG ACGGTCAACA AGTGGTCGGG CGCACCATCG ACGTGATGAA CCAGCTGTCG
GCGCGCATCA GCGATTCATG CGGCAACATC GAAACGCTCA ATGCCCACAC CGCCAACATC
GGGCAGATTC TCGATGTGAT CAGCGGCATT TCCCAACAGA CCAACCTACT GGCTCTGAAT
GCCGCGATCG AGGCGGCCCG TGCCGGTGAA GCCGGCCGTG GTTTTGCCGT GGTCGCCGAC
GAGGTCCGCA ACCTGGCGCA CCGCACCCAA GAGTCGGCGC AGCAGGTTCA GCGCCTGATC
GAAGAGTTGC AGGCCGGTGC CCAGATGGCC GTCAGCACCA TGAACCAGAG CCGTGAGCAC
AGCGACCAGA GCGTCGGGAT TGCCAACCAG GCCGGAGAGC GCCTGGGCAG TGTGACCCAG
CGCATAGGCG AAATCGATGG CATGAACCAG TCAGTGGCTA CCGCTACCGA GGAGCAGACA
GCGGTGGTCG AGTCGATCAA TGTCGACATC ACCGAGATCA ATACGCTGAA TCAGGAAGGA
GTGCAGAACC TGCAGAGCAC CTTGCGTGCC TGCACCGACC TTGAACACCA GGTCGAGCGG
TTGAAGCATC TGGTAGGGAG TTTCAGGATC TGA
 
Protein sequence
MTKNLKFSHK ILLAAALVVA VAFTCFVLFN DYRQRQSLRS DTQTNLQDLG RLTAGNIRTW 
LDSRKQLLAS LAQQIAADGP GKASLDRSLA LPVYASNFQL TYFGGQDGSM QSVPVGNRAA
DYDPRARGWY KAASAGSETI VTEPYISASA GKLVITLATP VQQGGRLIGV SGVDTDLQTI
SNLINTLDFD GHGHAFIVNG EGKILIHPKA DLALKTLADV YPGDTPHISS GLKEVELDGR
KQFISFTHVD GVPSADWYVA LVVDQDAAFA MLSELRTSAI VATLIAILVI IALLGLLIRV
LMEPLHLMGR AMHDIAEGEG DLTRRLAIHA QDEFGSLGQS FNRFVERIHE SIREVASATG
QVNAVATQVV SASNASIHNA DQQSSRTNSV AAAINQLGAA AQEIAQNAAL ASQHSSEARG
LAEDGQQVVG RTIDVMNQLS ARISDSCGNI ETLNAHTANI GQILDVISGI SQQTNLLALN
AAIEAARAGE AGRGFAVVAD EVRNLAHRTQ ESAQQVQRLI EELQAGAQMA VSTMNQSREH
SDQSVGIANQ AGERLGSVTQ RIGEIDGMNQ SVATATEEQT AVVESINVDI TEINTLNQEG
VQNLQSTLRA CTDLEHQVER LKHLVGSFRI