Gene PputGB1_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0343 
Symbol 
ID5868083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp396440 
End bp398377 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content64% 
IMG OID641545425 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001666592 
Protein GI167031361 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.675969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCT GGCGTAAGAG CATCCAGTGG CAATTGATCA CCAGCATGGG CGCCGCCTTG 
CTGGCGAGCA TCCTGGTCGT GGTCGTCATC TTCACCGTGG CGCTCAACCG CCTCACCGAG
CGCTACCTGG TCGACACTGC CTTGCCAGCC AGTATCGAAG CCATCCGCAA CGACATCGAA
CGCATGCTCG GCCAGCCTTT GGTGGCAGCG GCAGACATCG CCGGCAACAC CTTGCTGCGT
GACTGGCTGG CGGCTGGTGA AGAGCCCGCC CAGGCAGCGC AATTCACCGA ATACCTGACC
GCCGCCAAGC AGCGCAACCA GGCCTTCACT GCCCTGTTCG CGGCGACTGA AACCGGCCAC
TACTACAACG AGAACGGCCT GGACCGCACC CTCAGCCGCA GCAACCCCAA GGACAAGTGG
TTCTACGGCT ACATCGATAG CGGCGCCGAG CGGTTGATCA ACATCGACAT CGATGGTGCC
ACCGGCGAGC TGGCGCTGTT CATCGATTAC CGCGTGGAAA AAAATGGCCA GCTGGTCGGC
GTGGCCGGCA TGGGCCTGCG CATGACCGAG CTGTCGAAGC TGATCCACGA TTTCAGCTTC
GGCGAACACG GCAAAGTGTT TCTGGTGCGC AACGATGGCC TGATCCAGGT GCATCCAGAC
GCAGCCTTCA GTGGTAAACG CCAGCTCACC GAGCAGCTTG GGGCGGACGC AGCCAAGGGT
GTCATGACCG GAGGCGAGGG GCTGCGCAGC CGCCGCTTCA GCCGTGACGG CGAAAGCTAC
CTGGCGCTTG GTTTGCCACT GCGCGACCTT AACTGGACCC TGGTGGCCGA AGTGCCAGAG
TCGGAAATCT ATGCACAAAT GCATCAGGCC GTCTGGTTGA CCAGCCTGAT CGGTGGCGCC
GTGGCCCTGC TGTCACTGCT GCTGGTGGTG CTGTTGGCGC GTGGCCTGGT ACGGCCGATC
CGCCGCGTCA CCGGCGCGTT GGTGCAGATT GGCAGCGGCG CAGGAGACCT CAGCCACCGC
CTGGATGATT CGCGCCAGGA TGAGTTGGGC GACCTGGCCC GGGGGTTCAA CCGCTTTCTC
GACAGCCAGC GCAGCCTTAT CGGTGAGGTG TTGAGCACCT CCGAGCGGCT GCACCGGGCC
GTAGAGCAGG TAACTCAGGT GGTGGACAAC ACGGCCGAGC GCTCGGGGCG GCAGCAAGAG
ATGACCGAAA TGGTCGCTAC TGCCGTGCAT GAGATGGGCC TGACCGTGCA GGACATCGCC
CGCAATGCCG GCGATGCGGC GCAAGCCTCG CAGTCGGCGC GGGACGAGGC GTTGCAGGCG
CGCGAGGTGG TGCAACGCTC GATTCGGGGG ATCGAGGGCA TGTCGGGCGA CATCGGCAAG
GCTGCCGATG CAGTCACTCA GTTGGCCGAC GAAGTCGCCT CGATCGATGA AGTTCTGGCG
GTTATCCGTA GTATTTCCGA GCAGACCAAT TTGCTGGCAC TTAACGCGGC TATCGAGGCT
GCGCGGGCAG GGGAAATGGG GCGCGGTTTT GCCGTGGTGG CCGATGAGGT GCGCACGCTG
GCCCGGCGCA CACAGCTGTC CACCGACGAA GTGCAGCAGA TGATCCAGCG CCTGAAGCAG
GGCGCGGGGT CGGCGGTGAG TTCGATGCAG GCGGGGCAGC AGGCGACTGG CAGTGGTGTG
GAGTCGAGCC AGCGCACCGG GGCGTCGCTG GGCGCGATTA CCGACCAGGT GGAGCACATC
AGTGATATGA ACCATCAGGT GGCCACGGCG ACGGAAGAAC AGTCGGCGGT GACCGAGGAA
ATCAACCGGA CGGTGCAGGG GATTTCCGAC CTGGCGCGGG AAACGGCGGC GGAGGTGCAA
GGGTGTCGCG AGGAGTGCCA GGCGTTGCGT GGGTTGGCTG ATGATCTGGC GCGGCAGATG
GGTGGGTTCA GGCTTTAA
 
Protein sequence
MRIWRKSIQW QLITSMGAAL LASILVVVVI FTVALNRLTE RYLVDTALPA SIEAIRNDIE 
RMLGQPLVAA ADIAGNTLLR DWLAAGEEPA QAAQFTEYLT AAKQRNQAFT ALFAATETGH
YYNENGLDRT LSRSNPKDKW FYGYIDSGAE RLINIDIDGA TGELALFIDY RVEKNGQLVG
VAGMGLRMTE LSKLIHDFSF GEHGKVFLVR NDGLIQVHPD AAFSGKRQLT EQLGADAAKG
VMTGGEGLRS RRFSRDGESY LALGLPLRDL NWTLVAEVPE SEIYAQMHQA VWLTSLIGGA
VALLSLLLVV LLARGLVRPI RRVTGALVQI GSGAGDLSHR LDDSRQDELG DLARGFNRFL
DSQRSLIGEV LSTSERLHRA VEQVTQVVDN TAERSGRQQE MTEMVATAVH EMGLTVQDIA
RNAGDAAQAS QSARDEALQA REVVQRSIRG IEGMSGDIGK AADAVTQLAD EVASIDEVLA
VIRSISEQTN LLALNAAIEA ARAGEMGRGF AVVADEVRTL ARRTQLSTDE VQQMIQRLKQ
GAGSAVSSMQ AGQQATGSGV ESSQRTGASL GAITDQVEHI SDMNHQVATA TEEQSAVTEE
INRTVQGISD LARETAAEVQ GCREECQALR GLADDLARQM GGFRL