Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0343 |
Symbol | |
ID | 5868083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 396440 |
End bp | 398377 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641545425 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001666592 |
Protein GI | 167031361 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.675969 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATCT GGCGTAAGAG CATCCAGTGG CAATTGATCA CCAGCATGGG CGCCGCCTTG CTGGCGAGCA TCCTGGTCGT GGTCGTCATC TTCACCGTGG CGCTCAACCG CCTCACCGAG CGCTACCTGG TCGACACTGC CTTGCCAGCC AGTATCGAAG CCATCCGCAA CGACATCGAA CGCATGCTCG GCCAGCCTTT GGTGGCAGCG GCAGACATCG CCGGCAACAC CTTGCTGCGT GACTGGCTGG CGGCTGGTGA AGAGCCCGCC CAGGCAGCGC AATTCACCGA ATACCTGACC GCCGCCAAGC AGCGCAACCA GGCCTTCACT GCCCTGTTCG CGGCGACTGA AACCGGCCAC TACTACAACG AGAACGGCCT GGACCGCACC CTCAGCCGCA GCAACCCCAA GGACAAGTGG TTCTACGGCT ACATCGATAG CGGCGCCGAG CGGTTGATCA ACATCGACAT CGATGGTGCC ACCGGCGAGC TGGCGCTGTT CATCGATTAC CGCGTGGAAA AAAATGGCCA GCTGGTCGGC GTGGCCGGCA TGGGCCTGCG CATGACCGAG CTGTCGAAGC TGATCCACGA TTTCAGCTTC GGCGAACACG GCAAAGTGTT TCTGGTGCGC AACGATGGCC TGATCCAGGT GCATCCAGAC GCAGCCTTCA GTGGTAAACG CCAGCTCACC GAGCAGCTTG GGGCGGACGC AGCCAAGGGT GTCATGACCG GAGGCGAGGG GCTGCGCAGC CGCCGCTTCA GCCGTGACGG CGAAAGCTAC CTGGCGCTTG GTTTGCCACT GCGCGACCTT AACTGGACCC TGGTGGCCGA AGTGCCAGAG TCGGAAATCT ATGCACAAAT GCATCAGGCC GTCTGGTTGA CCAGCCTGAT CGGTGGCGCC GTGGCCCTGC TGTCACTGCT GCTGGTGGTG CTGTTGGCGC GTGGCCTGGT ACGGCCGATC CGCCGCGTCA CCGGCGCGTT GGTGCAGATT GGCAGCGGCG CAGGAGACCT CAGCCACCGC CTGGATGATT CGCGCCAGGA TGAGTTGGGC GACCTGGCCC GGGGGTTCAA CCGCTTTCTC GACAGCCAGC GCAGCCTTAT CGGTGAGGTG TTGAGCACCT CCGAGCGGCT GCACCGGGCC GTAGAGCAGG TAACTCAGGT GGTGGACAAC ACGGCCGAGC GCTCGGGGCG GCAGCAAGAG ATGACCGAAA TGGTCGCTAC TGCCGTGCAT GAGATGGGCC TGACCGTGCA GGACATCGCC CGCAATGCCG GCGATGCGGC GCAAGCCTCG CAGTCGGCGC GGGACGAGGC GTTGCAGGCG CGCGAGGTGG TGCAACGCTC GATTCGGGGG ATCGAGGGCA TGTCGGGCGA CATCGGCAAG GCTGCCGATG CAGTCACTCA GTTGGCCGAC GAAGTCGCCT CGATCGATGA AGTTCTGGCG GTTATCCGTA GTATTTCCGA GCAGACCAAT TTGCTGGCAC TTAACGCGGC TATCGAGGCT GCGCGGGCAG GGGAAATGGG GCGCGGTTTT GCCGTGGTGG CCGATGAGGT GCGCACGCTG GCCCGGCGCA CACAGCTGTC CACCGACGAA GTGCAGCAGA TGATCCAGCG CCTGAAGCAG GGCGCGGGGT CGGCGGTGAG TTCGATGCAG GCGGGGCAGC AGGCGACTGG CAGTGGTGTG GAGTCGAGCC AGCGCACCGG GGCGTCGCTG GGCGCGATTA CCGACCAGGT GGAGCACATC AGTGATATGA ACCATCAGGT GGCCACGGCG ACGGAAGAAC AGTCGGCGGT GACCGAGGAA ATCAACCGGA CGGTGCAGGG GATTTCCGAC CTGGCGCGGG AAACGGCGGC GGAGGTGCAA GGGTGTCGCG AGGAGTGCCA GGCGTTGCGT GGGTTGGCTG ATGATCTGGC GCGGCAGATG GGTGGGTTCA GGCTTTAA
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Protein sequence | MRIWRKSIQW QLITSMGAAL LASILVVVVI FTVALNRLTE RYLVDTALPA SIEAIRNDIE RMLGQPLVAA ADIAGNTLLR DWLAAGEEPA QAAQFTEYLT AAKQRNQAFT ALFAATETGH YYNENGLDRT LSRSNPKDKW FYGYIDSGAE RLINIDIDGA TGELALFIDY RVEKNGQLVG VAGMGLRMTE LSKLIHDFSF GEHGKVFLVR NDGLIQVHPD AAFSGKRQLT EQLGADAAKG VMTGGEGLRS RRFSRDGESY LALGLPLRDL NWTLVAEVPE SEIYAQMHQA VWLTSLIGGA VALLSLLLVV LLARGLVRPI RRVTGALVQI GSGAGDLSHR LDDSRQDELG DLARGFNRFL DSQRSLIGEV LSTSERLHRA VEQVTQVVDN TAERSGRQQE MTEMVATAVH EMGLTVQDIA RNAGDAAQAS QSARDEALQA REVVQRSIRG IEGMSGDIGK AADAVTQLAD EVASIDEVLA VIRSISEQTN LLALNAAIEA ARAGEMGRGF AVVADEVRTL ARRTQLSTDE VQQMIQRLKQ GAGSAVSSMQ AGQQATGSGV ESSQRTGASL GAITDQVEHI SDMNHQVATA TEEQSAVTEE INRTVQGISD LARETAAEVQ GCREECQALR GLADDLARQM GGFRL
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