More than 300 homologs were found in PanDaTox collection
for query gene Pmen_3669 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009656  PSPA7_5279  putative chemotaxis transducer  72.11 
 
 
712 aa  1009    Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  70.15 
 
 
713 aa  1013    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  100 
 
 
716 aa  1441    Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  72.8 
 
 
712 aa  1006    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_007963  Csal_1099  methyl-accepting chemotaxis sensory transducer  40.64 
 
 
699 aa  496  1e-139  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  40.83 
 
 
714 aa  456  1e-127  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  39.02 
 
 
714 aa  426  1e-118  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  39.56 
 
 
714 aa  425  1e-117  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  39.36 
 
 
688 aa  421  1e-116  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  39.06 
 
 
688 aa  416  9.999999999999999e-116  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  37.99 
 
 
714 aa  418  9.999999999999999e-116  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  37.85 
 
 
714 aa  419  9.999999999999999e-116  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  38.01 
 
 
738 aa  419  9.999999999999999e-116  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  34.07 
 
 
695 aa  414  1e-114  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  38.81 
 
 
688 aa  410  1e-113  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  38.02 
 
 
688 aa  412  1e-113  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  36.81 
 
 
715 aa  407  1.0000000000000001e-112  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  38.08 
 
 
714 aa  408  1.0000000000000001e-112  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  37.71 
 
 
714 aa  404  1e-111  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1940  methyl-accepting chemotaxis transducer  36.51 
 
 
716 aa  385  1e-105  Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.00000108039 
 
 
-
 
NC_011312  VSAL_I1951  methyl-accepting chemotaxis protein  34.21 
 
 
720 aa  375  1e-102  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  35.6 
 
 
712 aa  368  1e-100  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1066  methyl-accepting chemotaxis sensory transducer  35.63 
 
 
705 aa  342  1e-92  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_0972  methyl-accepting chemotaxis protein (MCP)  29.88 
 
 
779 aa  326  9e-88  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000412028  n/a   
 
 
-
 
NC_009457  VC0395_A1450  methyl-accepting chemotaxis protein  32.27 
 
 
706 aa  323  6e-87  Vibrio cholerae O395  Bacteria  hitchhiker  0.000000000571496  n/a   
 
 
-
 
NC_009092  Shew_2301  methyl-accepting chemotaxis sensory transducer  32.78 
 
 
705 aa  322  9.999999999999999e-87  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0911  chemotaxis sensory transducer  32.2 
 
 
705 aa  322  1.9999999999999998e-86  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000403524  n/a   
 
 
-
 
NC_008700  Sama_2635  putative methyl-accepting chemotaxis sensory transducer  34.58 
 
 
706 aa  322  1.9999999999999998e-86  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.993869 
 
 
-
 
NC_013512  Sdel_1205  chemotaxis sensory transducer  29.78 
 
 
713 aa  320  7e-86  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2193  methyl-accepting chemotaxis protein  31.12 
 
 
697 aa  317  5e-85  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  31.44 
 
 
741 aa  315  9.999999999999999e-85  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007498  Pcar_0439  methyl-accepting chemotaxis protein (MCP)  29.76 
 
 
740 aa  315  9.999999999999999e-85  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3002  methyl-accepting chemotaxis sensory transducer  33.73 
 
 
705 aa  314  3.9999999999999997e-84  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.568622  n/a   
 
 
-
 
NC_009665  Shew185_1187  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
706 aa  313  5.999999999999999e-84  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3170  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
706 aa  313  5.999999999999999e-84  Shewanella baltica OS223  Bacteria  normal  normal  0.942476 
 
 
-
 
NC_009997  Sbal195_1220  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
706 aa  313  5.999999999999999e-84  Shewanella baltica OS195  Bacteria  normal  normal  0.46231 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  36.99 
 
 
626 aa  312  1e-83  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  53.94 
 
 
636 aa  308  2.0000000000000002e-82  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_008577  Shewana3_3088  methyl-accepting chemotaxis sensory transducer  33.07 
 
 
706 aa  307  5.0000000000000004e-82  Shewanella sp. ANA-3  Bacteria  normal  0.0193815  hitchhiker  0.00820004 
 
 
-
 
NC_008321  Shewmr4_2909  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
706 aa  305  1.0000000000000001e-81  Shewanella sp. MR-4  Bacteria  normal  normal  0.307732 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  48.74 
 
 
541 aa  305  2.0000000000000002e-81  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  54.46 
 
 
637 aa  304  3.0000000000000004e-81  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_011989  Avi_4113  methyl-accepting chemotaxis protein  29.47 
 
 
778 aa  303  6.000000000000001e-81  Agrobacterium vitis S4  Bacteria  normal  0.433818  n/a   
 
 
-
 
NC_008322  Shewmr7_2991  methyl-accepting chemotaxis sensory transducer  33.07 
 
 
706 aa  303  6.000000000000001e-81  Shewanella sp. MR-7  Bacteria  normal  0.0750474  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  46.48 
 
 
638 aa  303  7.000000000000001e-81  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009783  VIBHAR_02788  hypothetical protein  32.78 
 
 
698 aa  303  1e-80  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  48.59 
 
 
674 aa  302  2e-80  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  28.67 
 
 
731 aa  301  3e-80  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  29.23 
 
 
730 aa  299  1e-79  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003063  methyl-accepting chemotaxis protein  35.5 
 
 
682 aa  298  3e-79  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1103  methyl-accepting chemotaxis sensory transducer  30.86 
 
 
706 aa  293  8e-78  Shewanella putrefaciens CN-32  Bacteria  normal  0.540965  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
637 aa  293  1e-77  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  46.13 
 
 
640 aa  291  2e-77  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  47.47 
 
 
541 aa  291  2e-77  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_004347  SO_1278  methyl-accepting chemotaxis protein  31.79 
 
 
706 aa  291  3e-77  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  38.17 
 
 
554 aa  290  5.0000000000000004e-77  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3709  methyl-accepting chemotaxis sensory transducer  29.33 
 
 
707 aa  286  8e-76  Marinomonas sp. MWYL1  Bacteria  normal  0.852924  normal  0.967698 
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  36.94 
 
 
622 aa  285  2.0000000000000002e-75  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  37.31 
 
 
554 aa  285  3.0000000000000004e-75  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  39.59 
 
 
627 aa  284  3.0000000000000004e-75  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_007005  Psyr_2682  histidine kinase, HAMP region: chemotaxis sensory transducer  28.76 
 
 
723 aa  284  3.0000000000000004e-75  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.121525  normal 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  37.31 
 
 
554 aa  284  3.0000000000000004e-75  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  45.85 
 
 
568 aa  284  5.000000000000001e-75  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.1 
 
 
554 aa  283  7.000000000000001e-75  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4675  methyl-accepting chemotaxis protein  31.3 
 
 
701 aa  283  7.000000000000001e-75  Colwellia psychrerythraea 34H  Bacteria  normal  0.595763  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  45.58 
 
 
640 aa  283  8.000000000000001e-75  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_011138  MADE_01109  methyl-accepting chemotaxis protein  31.3 
 
 
743 aa  283  8.000000000000001e-75  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.566074  n/a   
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  36.89 
 
 
554 aa  283  1e-74  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  36.94 
 
 
554 aa  282  2e-74  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  46.11 
 
 
552 aa  281  3e-74  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  36.54 
 
 
554 aa  281  3e-74  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  46.89 
 
 
634 aa  281  3e-74  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  29.9 
 
 
730 aa  281  4e-74  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  36.94 
 
 
554 aa  280  9e-74  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.24 
 
 
626 aa  277  4e-73  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  45.48 
 
 
634 aa  277  5e-73  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  37.27 
 
 
622 aa  277  6e-73  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  45.03 
 
 
629 aa  276  7e-73  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  37.15 
 
 
554 aa  276  8e-73  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  34.81 
 
 
626 aa  276  8e-73  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  49.26 
 
 
624 aa  274  4.0000000000000004e-72  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  37.61 
 
 
554 aa  271  2.9999999999999997e-71  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.28 
 
 
628 aa  270  5e-71  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  33.28 
 
 
628 aa  270  5.9999999999999995e-71  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  42.19 
 
 
564 aa  270  8e-71  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  44.6 
 
 
568 aa  270  8e-71  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.73 
 
 
630 aa  270  8.999999999999999e-71  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  36.73 
 
 
630 aa  270  8.999999999999999e-71  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  37.95 
 
 
568 aa  269  1e-70  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  48.16 
 
 
552 aa  269  1e-70  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  33.28 
 
 
643 aa  268  2e-70  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_011312  VSAL_I2130  methyl-accepting chemotaxis protein  43.86 
 
 
546 aa  268  2e-70  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.665531  n/a   
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  36.73 
 
 
630 aa  268  2.9999999999999995e-70  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  36.29 
 
 
623 aa  268  2.9999999999999995e-70  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  43.64 
 
 
543 aa  268  2.9999999999999995e-70  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  37.95 
 
 
554 aa  268  4e-70  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  37.95 
 
 
554 aa  267  5e-70  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  35.45 
 
 
636 aa  267  5e-70  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  34.4 
 
 
554 aa  267  5e-70  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  47.71 
 
 
638 aa  267  5.999999999999999e-70  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
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