More than 300 homologs were found in PanDaTox collection
for query gene Pcar_0439 on replicon NC_007498
Organism: Pelobacter carbinolicus DSM 2380



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007005  Psyr_2682  histidine kinase, HAMP region: chemotaxis sensory transducer  50.14 
 
 
723 aa  706    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.121525  normal 
 
 
-
 
NC_007498  Pcar_0439  methyl-accepting chemotaxis protein (MCP)  100 
 
 
740 aa  1491    Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0972  methyl-accepting chemotaxis protein (MCP)  61.42 
 
 
779 aa  866    Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000412028  n/a   
 
 
-
 
NC_013512  Sdel_1205  chemotaxis sensory transducer  49.66 
 
 
713 aa  702    Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4113  methyl-accepting chemotaxis protein  41.03 
 
 
778 aa  539  9.999999999999999e-153  Agrobacterium vitis S4  Bacteria  normal  0.433818  n/a   
 
 
-
 
NC_007498  Pcar_0585  methyl-accepting chemotaxis protein (MCP)  45.27 
 
 
706 aa  535  1e-151  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000000000132912  n/a   
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  39.37 
 
 
731 aa  510  1e-143  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  41.42 
 
 
730 aa  501  1e-140  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  40.21 
 
 
741 aa  497  1e-139  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  38.44 
 
 
730 aa  479  1e-134  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0545  methyl-accepting chemotaxis protein (MCP)  64.35 
 
 
676 aa  440  9.999999999999999e-123  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  1.25556e-16  n/a   
 
 
-
 
NC_007963  Csal_1099  methyl-accepting chemotaxis sensory transducer  34.48 
 
 
699 aa  412  1e-113  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2364  putative methyl-accepting chemotaxis protein (MCP)  63.33 
 
 
702 aa  398  1e-109  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2967  methyl-accepting chemotaxis protein (MCP)  56.85 
 
 
695 aa  368  1e-100  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000011738  n/a   
 
 
-
 
NC_007498  Pcar_1355  putative methyl-accepting chemotaxis protein (MCP)  57.56 
 
 
744 aa  363  6e-99  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1336  putative methyl-accepting chemotaxis protein (MCP)  54.64 
 
 
740 aa  343  5e-93  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000730785  n/a   
 
 
-
 
NC_007498  Pcar_1372  putative methyl-accepting chemotaxis protein (MCP)  52.14 
 
 
706 aa  330  7e-89  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  29.65 
 
 
713 aa  328  1.0000000000000001e-88  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_012880  Dd703_3926  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.05 
 
 
665 aa  322  1.9999999999999998e-86  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0006  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.83 
 
 
667 aa  321  3e-86  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2023  methyl-accepting chemotaxis sensory transducer  42.05 
 
 
823 aa  320  3.9999999999999996e-86  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0346871  n/a   
 
 
-
 
NC_009012  Cthe_0039  methyl-accepting chemotaxis sensory transducer  52.76 
 
 
623 aa  320  7.999999999999999e-86  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0007  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.29 
 
 
636 aa  319  1e-85  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1498  methyl-accepting chemotaxis sensory transducer  52.1 
 
 
602 aa  315  1.9999999999999998e-84  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  29.76 
 
 
712 aa  314  2.9999999999999996e-84  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_007947  Mfla_0352  methyl-accepting chemotaxis sensory transducer  31.08 
 
 
649 aa  306  7e-82  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.127099 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  29.37 
 
 
712 aa  304  4.0000000000000003e-81  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  29.76 
 
 
716 aa  297  4e-79  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009012  Cthe_3030  methyl-accepting chemotaxis sensory transducer  54.86 
 
 
832 aa  293  9e-78  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00284544  n/a   
 
 
-
 
NC_011898  Ccel_2313  methyl-accepting chemotaxis sensory transducer  59.47 
 
 
567 aa  291  3e-77  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2607  methyl-accepting chemotaxis protein (MCP)  46.55 
 
 
741 aa  287  4e-76  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0298  methyl-accepting chemotaxis sensory transducer  47.14 
 
 
600 aa  285  2.0000000000000002e-75  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000000337227  n/a   
 
 
-
 
NC_010623  Bphy_4943  methyl-accepting chemotaxis sensory transducer  31.88 
 
 
571 aa  283  9e-75  Burkholderia phymatum STM815  Bacteria  normal  0.769292  normal 
 
 
-
 
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  28.94 
 
 
695 aa  283  1e-74  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
NC_013216  Dtox_0613  methyl-accepting chemotaxis sensory transducer  46.78 
 
 
759 aa  279  2e-73  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.194714 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  29.16 
 
 
714 aa  276  1.0000000000000001e-72  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  30.01 
 
 
688 aa  274  4.0000000000000004e-72  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  29.05 
 
 
738 aa  273  7e-72  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  29.11 
 
 
714 aa  271  2e-71  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  28.18 
 
 
715 aa  271  4e-71  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  28.74 
 
 
714 aa  270  1e-70  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_011369  Rleg2_0221  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.42 
 
 
785 aa  268  2e-70  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2372  methyl-accepting chemotaxis sensory transducer  29.64 
 
 
657 aa  268  2.9999999999999995e-70  Pectobacterium wasabiae WPP163  Bacteria  normal  0.63052  n/a   
 
 
-
 
NC_010506  Swoo_2794  methyl-accepting chemotaxis sensory transducer  52.12 
 
 
717 aa  264  4.999999999999999e-69  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  28.82 
 
 
714 aa  263  8e-69  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2086  methyl-accepting chemotaxis sensory transducer  28.77 
 
 
657 aa  263  8e-69  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0051  methyl-accepting chemotaxis sensory transducer  29.99 
 
 
796 aa  262  2e-68  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.000000874578 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  28.55 
 
 
714 aa  261  3e-68  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_009654  Mmwyl1_0161  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
661 aa  261  3e-68  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.0270172 
 
 
-
 
NC_011369  Rleg2_0052  methyl-accepting chemotaxis sensory transducer  28.26 
 
 
778 aa  260  8e-68  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0947231 
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  28.91 
 
 
712 aa  259  1e-67  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0943  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.69 
 
 
793 aa  258  3e-67  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.27721  normal 
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  28.24 
 
 
714 aa  258  3e-67  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  29.78 
 
 
688 aa  257  7e-67  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  29.64 
 
 
688 aa  255  2.0000000000000002e-66  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  30.25 
 
 
688 aa  255  2.0000000000000002e-66  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_012034  Athe_1768  methyl-accepting chemotaxis sensory transducer  51.21 
 
 
516 aa  251  4e-65  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  45 
 
 
621 aa  248  2e-64  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  45 
 
 
617 aa  249  2e-64  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  28.11 
 
 
714 aa  249  2e-64  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1201  methyl-accepting chemotaxis protein  27.81 
 
 
728 aa  242  2e-62  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  44.19 
 
 
608 aa  240  5e-62  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_008043  TM1040_3177  methyl-accepting chemotaxis sensory transducer  29.56 
 
 
749 aa  240  5e-62  Ruegeria sp. TM1040  Bacteria  normal  0.726311  normal 
 
 
-
 
NC_011989  Avi_1200  methyl-accepting chemotaxis protein  28.79 
 
 
728 aa  238  4e-61  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3293  methyl-accepting chemotaxis sensory transducer  28.93 
 
 
720 aa  237  5.0000000000000005e-61  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.601  n/a   
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  45.93 
 
 
535 aa  237  6e-61  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  46.27 
 
 
575 aa  237  7e-61  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_012880  Dd703_3865  methyl-accepting chemotaxis sensory transducer  47.1 
 
 
551 aa  237  7e-61  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3862  methyl-accepting chemotaxis sensory transducer  46.46 
 
 
555 aa  235  2.0000000000000002e-60  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1066  methyl-accepting chemotaxis sensory transducer  27.95 
 
 
705 aa  234  5e-60  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0104  methyl-accepting chemotaxis sensory transducer  46.58 
 
 
548 aa  233  8.000000000000001e-60  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  43.99 
 
 
596 aa  233  8.000000000000001e-60  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3613  methyl-accepting chemotaxis sensory transducer  45.64 
 
 
530 aa  231  3e-59  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0106  methyl-accepting chemotaxis sensory transducer  45.79 
 
 
556 aa  231  4e-59  Pectobacterium wasabiae WPP163  Bacteria  normal  0.405526  n/a   
 
 
-
 
NC_009654  Mmwyl1_3709  methyl-accepting chemotaxis sensory transducer  27.3 
 
 
707 aa  230  7e-59  Marinomonas sp. MWYL1  Bacteria  normal  0.852924  normal  0.967698 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  47.1 
 
 
573 aa  229  1e-58  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  45.76 
 
 
578 aa  229  1e-58  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_007963  Csal_0126  methyl-accepting chemotaxis sensory transducer  31.19 
 
 
613 aa  229  1e-58  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4046  methyl-accepting chemotaxis sensory transducer  47.1 
 
 
560 aa  229  1e-58  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  45.36 
 
 
543 aa  228  2e-58  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0112  methyl-accepting chemotaxis sensory transducer  46.6 
 
 
556 aa  229  2e-58  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  43.55 
 
 
549 aa  229  2e-58  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_012917  PC1_3910  methyl-accepting chemotaxis sensory transducer  45.58 
 
 
555 aa  229  2e-58  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0626  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.17 
 
 
726 aa  227  5.0000000000000005e-58  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_3445  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.16 
 
 
746 aa  227  5.0000000000000005e-58  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.2502  normal 
 
 
-
 
NC_012912  Dd1591_0695  methyl-accepting chemotaxis sensory transducer  39.37 
 
 
561 aa  228  5.0000000000000005e-58  Dickeya zeae Ech1591  Bacteria  normal  0.305861  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  43.72 
 
 
577 aa  227  6e-58  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_008346  Swol_1331  putative methyl-accepting chemotaxis sensory transducer  53.42 
 
 
370 aa  227  6e-58  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  40.28 
 
 
513 aa  227  8e-58  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1940  methyl-accepting chemotaxis transducer  26.55 
 
 
716 aa  226  9e-58  Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.00000108039 
 
 
-
 
NC_013421  Pecwa_0105  methyl-accepting chemotaxis sensory transducer  44.33 
 
 
556 aa  226  9e-58  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  44.7 
 
 
527 aa  226  9e-58  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  40.22 
 
 
552 aa  226  1e-57  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_012917  PC1_0111  methyl-accepting chemotaxis sensory transducer  44.67 
 
 
556 aa  226  1e-57  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4446  methyl-accepting chemotaxis sensory transducer  47.57 
 
 
605 aa  226  1e-57  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0260008  normal  0.622584 
 
 
-
 
NC_012856  Rpic12D_1408  methyl-accepting chemotaxis sensory transducer  40.29 
 
 
513 aa  225  2e-57  Ralstonia pickettii 12D  Bacteria  normal  0.0312904  normal  0.0311205 
 
 
-
 
NC_010002  Daci_3767  methyl-accepting chemotaxis sensory transducer  47.08 
 
 
544 aa  226  2e-57  Delftia acidovorans SPH-1  Bacteria  normal  0.155197  normal  0.170651 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
569 aa  226  2e-57  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  41 
 
 
513 aa  224  3e-57  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  46.76 
 
 
597 aa  224  3e-57  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
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