More than 300 homologs were found in PanDaTox collection
for query gene Rfer_3609 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  100 
 
 
596 aa  1192    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  56.83 
 
 
579 aa  558  1e-158  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  56.09 
 
 
589 aa  560  1e-158  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  53.65 
 
 
535 aa  516  1.0000000000000001e-145  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  51.08 
 
 
532 aa  481  1e-134  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  53.49 
 
 
537 aa  473  1e-132  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  48.67 
 
 
572 aa  465  9.999999999999999e-131  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  47.94 
 
 
578 aa  467  9.999999999999999e-131  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  72.19 
 
 
552 aa  464  1e-129  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  65.38 
 
 
579 aa  457  1e-127  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  53.99 
 
 
542 aa  453  1.0000000000000001e-126  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  63.79 
 
 
583 aa  454  1.0000000000000001e-126  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  51.55 
 
 
580 aa  446  1.0000000000000001e-124  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  52.87 
 
 
511 aa  446  1.0000000000000001e-124  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  63.04 
 
 
589 aa  434  1e-120  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  77.74 
 
 
578 aa  432  1e-119  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  53.21 
 
 
592 aa  425  1e-118  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  47.86 
 
 
586 aa  426  1e-118  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  62.18 
 
 
527 aa  417  9.999999999999999e-116  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  64.3 
 
 
598 aa  416  9.999999999999999e-116  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  50.65 
 
 
584 aa  413  1e-114  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  44.98 
 
 
570 aa  408  1.0000000000000001e-112  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  50.57 
 
 
532 aa  407  1.0000000000000001e-112  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_012856  Rpic12D_1408  methyl-accepting chemotaxis sensory transducer  48.23 
 
 
513 aa  402  9.999999999999999e-111  Ralstonia pickettii 12D  Bacteria  normal  0.0312904  normal  0.0311205 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  48.96 
 
 
573 aa  401  9.999999999999999e-111  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  49.9 
 
 
608 aa  396  1e-109  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  49.9 
 
 
608 aa  396  1e-109  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  71.34 
 
 
659 aa  397  1e-109  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  48.74 
 
 
588 aa  394  1e-108  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_003295  RSc1460  methyl-accepting chemotaxis transducer transmembrane protein  47.86 
 
 
513 aa  392  1e-108  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.75608 
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  69.38 
 
 
471 aa  394  1e-108  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  48.74 
 
 
601 aa  394  1e-108  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  49.71 
 
 
600 aa  391  1e-107  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  44.15 
 
 
608 aa  392  1e-107  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  62.26 
 
 
653 aa  389  1e-107  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  62.26 
 
 
653 aa  389  1e-107  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  72.64 
 
 
614 aa  387  1e-106  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  48.04 
 
 
557 aa  386  1e-106  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  43.59 
 
 
554 aa  384  1e-105  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  68.87 
 
 
537 aa  383  1e-105  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  54.82 
 
 
559 aa  380  1e-104  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007974  Rmet_3678  methyl-accepting chemotaxis sensory transducer  51.3 
 
 
605 aa  382  1e-104  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.12372 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  46.72 
 
 
615 aa  382  1e-104  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  46.72 
 
 
615 aa  382  1e-104  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1232  methyl-accepting chemotaxis sensory transducer  49.33 
 
 
595 aa  380  1e-104  Burkholderia phymatum STM815  Bacteria  normal  0.0384777  normal  0.175298 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  44.87 
 
 
559 aa  379  1e-103  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RSp0303  methyl-accepting chemotaxis transmembrane protein  48.26 
 
 
515 aa  378  1e-103  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0248188 
 
 
-
 
NC_007651  BTH_I2470  methyl-accepting chemotaxis protein  48.48 
 
 
616 aa  375  1e-103  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  44.12 
 
 
569 aa  378  1e-103  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  68.05 
 
 
589 aa  376  1e-103  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  45.69 
 
 
553 aa  378  1e-103  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  47.97 
 
 
522 aa  374  1e-102  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  47.97 
 
 
522 aa  374  1e-102  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  69.55 
 
 
515 aa  371  1e-101  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  46.18 
 
 
617 aa  367  1e-100  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  49.6 
 
 
536 aa  367  1e-100  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  45.9 
 
 
618 aa  365  1e-99  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_007951  Bxe_A2023  methyl-accepting chemotaxis sensory transducer  43.46 
 
 
538 aa  365  1e-99  Burkholderia xenovorans LB400  Bacteria  normal  0.205381  normal 
 
 
-
 
NC_010681  Bphyt_0620  methyl-accepting chemotaxis sensory transducer  43.53 
 
 
549 aa  365  2e-99  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0437284 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  43.99 
 
 
566 aa  365  2e-99  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_010622  Bphy_2972  methyl-accepting chemotaxis sensory transducer  46.53 
 
 
597 aa  363  5.0000000000000005e-99  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00113075 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  65.18 
 
 
642 aa  363  6e-99  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_010622  Bphy_0345  methyl-accepting chemotaxis sensory transducer  44.06 
 
 
547 aa  363  6e-99  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A4750  methyl-accepting chemotaxis sensory transducer  47.35 
 
 
612 aa  361  2e-98  Burkholderia sp. 383  Bacteria  normal  normal  0.445402 
 
 
-
 
NC_007434  BURPS1710b_2024  methyl-accepting chemotaxis protein I  48.2 
 
 
634 aa  359  9e-98  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
575 aa  358  1.9999999999999998e-97  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_009076  BURPS1106A_1872  methyl-accepting chemotaxis protein  48.01 
 
 
626 aa  357  2.9999999999999997e-97  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1859  methyl-accepting chemotaxis protein  48.01 
 
 
621 aa  356  5.999999999999999e-97  Burkholderia pseudomallei 668  Bacteria  normal  0.674726  n/a   
 
 
-
 
NC_010508  Bcenmc03_1588  methyl-accepting chemotaxis sensory transducer  44.56 
 
 
588 aa  354  2.9999999999999997e-96  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.834305  normal 
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  51.99 
 
 
564 aa  354  2.9999999999999997e-96  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  46.24 
 
 
549 aa  353  4e-96  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  60.23 
 
 
650 aa  353  4e-96  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_007951  Bxe_A4080  methyl-accepting chemotaxis sensory transducer  43.92 
 
 
549 aa  353  5e-96  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  45.71 
 
 
586 aa  353  5.9999999999999994e-96  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_008836  BMA10229_A1686  putative methyl-accepting chemotaxis protein  45.12 
 
 
673 aa  352  1e-95  Burkholderia mallei NCTC 10229  Bacteria  normal  0.303273  n/a   
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  41.37 
 
 
554 aa  352  1e-95  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  40.79 
 
 
567 aa  352  1e-95  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3118  putative methyl-accepting chemotaxis protein  45.12 
 
 
673 aa  352  1e-95  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0285227  n/a   
 
 
-
 
NC_010681  Bphyt_2245  methyl-accepting chemotaxis sensory transducer  42.36 
 
 
524 aa  352  1e-95  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  66.04 
 
 
577 aa  352  1e-95  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_006348  BMA2857  methyl-accepting chemotaxis protein, putative  45.12 
 
 
673 aa  351  2e-95  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0074  methyl-accepting chemotaxis protein I  45.12 
 
 
673 aa  351  2e-95  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3433  putative methyl-accepting chemotaxis protein  45.12 
 
 
673 aa  351  2e-95  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  55.89 
 
 
513 aa  351  2e-95  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_3934  methyl-accepting chemotaxis protein  45.12 
 
 
673 aa  352  2e-95  Burkholderia pseudomallei 1106a  Bacteria  normal  0.3175  n/a   
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  47.74 
 
 
516 aa  351  3e-95  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  48.88 
 
 
584 aa  351  3e-95  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  52.45 
 
 
580 aa  350  4e-95  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  42.62 
 
 
562 aa  350  6e-95  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  42.88 
 
 
555 aa  349  7e-95  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_010551  BamMC406_1527  methyl-accepting chemotaxis sensory transducer  45.18 
 
 
587 aa  349  7e-95  Burkholderia ambifaria MC40-6  Bacteria  normal  0.512784  normal  0.576949 
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  64.6 
 
 
433 aa  348  1e-94  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1131  methyl-accepting chemotaxis sensory transducer  47.24 
 
 
588 aa  348  1e-94  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1611  methyl-accepting chemotaxis sensory transducer  47.24 
 
 
588 aa  348  1e-94  Burkholderia cenocepacia HI2424  Bacteria  normal  0.542582  n/a   
 
 
-
 
NC_009074  BURPS668_3853  methyl-accepting chemotaxis protein II  44.93 
 
 
671 aa  348  2e-94  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1203  methyl-accepting chemotaxis protein II  53.94 
 
 
553 aa  347  3e-94  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.697919  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.79 
 
 
598 aa  347  3e-94  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A2074  methyl-accepting chemotaxis protein II  40.58 
 
 
553 aa  346  6e-94  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.162752  hitchhiker  0.000345874 
 
 
-
 
NC_011080  SNSL254_A2079  methyl-accepting chemotaxis protein II  53.94 
 
 
553 aa  346  7e-94  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.429347  hitchhiker  1.96177e-16 
 
 
-
 
NC_011083  SeHA_C2134  methyl-accepting chemotaxis protein II  53.69 
 
 
553 aa  345  8.999999999999999e-94  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  1.16019e-17 
 
 
-
 
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