More than 300 homologs were found in PanDaTox collection
for query gene Rfer_2354 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  100 
 
 
554 aa  1107    Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_008752  Aave_0035  methyl-accepting chemotaxis sensory transducer  49.63 
 
 
558 aa  451  1e-125  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0036  methyl-accepting chemotaxis sensory transducer  49.54 
 
 
567 aa  433  1e-120  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  48.26 
 
 
594 aa  434  1e-120  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  49.24 
 
 
550 aa  427  1e-118  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3659  methyl-accepting chemotaxis sensory transducer  48.67 
 
 
550 aa  422  1e-117  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0038  methyl-accepting chemotaxis sensory transducer  48.47 
 
 
550 aa  424  1e-117  Acidovorax ebreus TPSY  Bacteria  normal  0.398829  n/a   
 
 
-
 
NC_008782  Ajs_0020  methyl-accepting chemotaxis sensory transducer  48.29 
 
 
550 aa  424  1e-117  Acidovorax sp. JS42  Bacteria  normal  normal  0.857372 
 
 
-
 
NC_008752  Aave_0831  methyl-accepting chemotaxis sensory transducer  45.79 
 
 
561 aa  403  1e-111  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236088  normal  0.180731 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  65.68 
 
 
584 aa  397  1e-109  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  65.84 
 
 
589 aa  396  1e-109  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  48.42 
 
 
602 aa  389  1e-107  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_007908  Rfer_3119  methyl-accepting chemotaxis sensory transducer  63.19 
 
 
554 aa  377  1e-103  Rhodoferax ferrireducens T118  Bacteria  normal  0.813886  n/a   
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  64.67 
 
 
591 aa  375  1e-102  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  66.12 
 
 
591 aa  370  1e-101  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_008782  Ajs_4123  methyl-accepting chemotaxis sensory transducer  64.6 
 
 
674 aa  371  1e-101  Acidovorax sp. JS42  Bacteria  normal  0.162807  normal  0.87643 
 
 
-
 
NC_011992  Dtpsy_3481  methyl-accepting chemotaxis sensory transducer  64.6 
 
 
674 aa  371  1e-101  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5082  methyl-accepting chemotaxis sensory transducer  50.52 
 
 
589 aa  365  1e-100  Delftia acidovorans SPH-1  Bacteria  normal  0.678642  normal  0.0204532 
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  65.23 
 
 
622 aa  366  1e-100  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  59.82 
 
 
583 aa  363  4e-99  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008752  Aave_1344  methyl-accepting chemotaxis sensory transducer  69.72 
 
 
536 aa  361  2e-98  Acidovorax citrulli AAC00-1  Bacteria  normal  0.129873  normal  0.199885 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  53.94 
 
 
559 aa  358  1.9999999999999998e-97  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  63.49 
 
 
520 aa  353  2.9999999999999997e-96  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  52.14 
 
 
542 aa  350  6e-95  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4294  methyl-accepting chemotaxis sensory transducer  59.71 
 
 
539 aa  349  9e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  42.83 
 
 
578 aa  348  1e-94  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  56.77 
 
 
537 aa  348  2e-94  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  42.55 
 
 
596 aa  345  2e-93  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  63.92 
 
 
597 aa  342  9e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  55.34 
 
 
508 aa  340  2.9999999999999998e-92  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  56.68 
 
 
552 aa  340  2.9999999999999998e-92  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  42.91 
 
 
580 aa  340  5e-92  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  54.75 
 
 
579 aa  339  5.9999999999999996e-92  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_010002  Daci_5410  methyl-accepting chemotaxis sensory transducer  55.56 
 
 
635 aa  337  3.9999999999999995e-91  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_1752  methyl-accepting chemotaxis sensory transducer  55.34 
 
 
523 aa  337  5e-91  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  52.55 
 
 
653 aa  336  7e-91  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  52.55 
 
 
653 aa  336  7.999999999999999e-91  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  56.4 
 
 
527 aa  334  2e-90  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  56.35 
 
 
572 aa  334  2e-90  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  60.4 
 
 
532 aa  335  2e-90  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  42.83 
 
 
511 aa  334  3e-90  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  55.67 
 
 
577 aa  333  5e-90  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  42.49 
 
 
557 aa  333  6e-90  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1601  methyl-accepting chemotaxis sensory transducer  67.03 
 
 
490 aa  332  1e-89  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000628162 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  60.34 
 
 
532 aa  332  1e-89  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6240  chemotaxis sensory transducer  59.08 
 
 
556 aa  331  2e-89  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  59.94 
 
 
537 aa  331  2e-89  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_010524  Lcho_2363  methyl-accepting chemotaxis sensory transducer  61.22 
 
 
512 aa  330  4e-89  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  68.03 
 
 
579 aa  330  5.0000000000000004e-89  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  55.82 
 
 
578 aa  329  9e-89  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  60.26 
 
 
589 aa  329  9e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2548  methyl-accepting chemotaxis protein  64.97 
 
 
525 aa  329  1.0000000000000001e-88  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00975221  normal  0.500866 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  58.18 
 
 
579 aa  328  2.0000000000000001e-88  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  41.86 
 
 
535 aa  327  3e-88  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  51.9 
 
 
569 aa  327  3e-88  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  65.59 
 
 
598 aa  327  4.0000000000000003e-88  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  56.31 
 
 
586 aa  326  6e-88  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  48.15 
 
 
585 aa  326  6e-88  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_008782  Ajs_3430  methyl-accepting chemotaxis sensory transducer  56.7 
 
 
584 aa  324  2e-87  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  60.6 
 
 
539 aa  324  2e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  57.96 
 
 
659 aa  324  3e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  60 
 
 
573 aa  323  3e-87  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  61.09 
 
 
566 aa  323  4e-87  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_011992  Dtpsy_2762  methyl-accepting chemotaxis sensory transducer  54.23 
 
 
584 aa  323  4e-87  Acidovorax ebreus TPSY  Bacteria  normal  0.636912  n/a   
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  59.74 
 
 
632 aa  323  6e-87  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  55.82 
 
 
598 aa  323  6e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  61.89 
 
 
586 aa  323  7e-87  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  57.93 
 
 
592 aa  322  9.999999999999999e-87  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  63.36 
 
 
589 aa  322  9.999999999999999e-87  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  56.16 
 
 
650 aa  322  9.999999999999999e-87  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  59.88 
 
 
433 aa  322  9.999999999999999e-87  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  47.44 
 
 
513 aa  322  1.9999999999999998e-86  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  53.31 
 
 
567 aa  320  3.9999999999999996e-86  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0335  methyl-accepting chemotaxis protein I  55.75 
 
 
394 aa  320  3.9999999999999996e-86  Methylibium petroleiphilum PM1  Bacteria  normal  0.809135  normal  0.684623 
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  59.41 
 
 
548 aa  320  3.9999999999999996e-86  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  59.11 
 
 
642 aa  320  3.9999999999999996e-86  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  50.88 
 
 
618 aa  320  6e-86  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  49.32 
 
 
559 aa  319  7e-86  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A2405  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  55.29 
 
 
514 aa  319  7e-86  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000957151  normal  0.313744 
 
 
-
 
NC_012917  PC1_0112  methyl-accepting chemotaxis sensory transducer  43.3 
 
 
556 aa  319  7e-86  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  58.14 
 
 
585 aa  319  1e-85  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_010002  Daci_0740  methyl-accepting chemotaxis sensory transducer  55.95 
 
 
565 aa  318  1e-85  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2088  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.63 
 
 
617 aa  318  1e-85  Acidovorax ebreus TPSY  Bacteria  normal  0.258516  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  58.26 
 
 
584 aa  318  2e-85  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  50.76 
 
 
617 aa  317  3e-85  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_4454  methyl-accepting chemotaxis sensory transducer  43.01 
 
 
653 aa  317  3e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  0.625525  n/a   
 
 
-
 
NC_013421  Pecwa_0106  methyl-accepting chemotaxis sensory transducer  40.21 
 
 
556 aa  317  4e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  0.405526  n/a   
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  62.24 
 
 
515 aa  317  5e-85  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  48.87 
 
 
614 aa  316  6e-85  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  58.26 
 
 
584 aa  316  6e-85  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  58.5 
 
 
471 aa  316  6e-85  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_013421  Pecwa_0105  methyl-accepting chemotaxis sensory transducer  56.04 
 
 
556 aa  316  6e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4495  methyl-accepting chemotaxis sensory transducer  61.28 
 
 
605 aa  316  8e-85  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0928828 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  58.95 
 
 
680 aa  316  8e-85  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  53.78 
 
 
580 aa  314  1.9999999999999998e-84  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  52.72 
 
 
543 aa  314  2.9999999999999996e-84  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  59.8 
 
 
615 aa  314  2.9999999999999996e-84  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  47.25 
 
 
661 aa  314  2.9999999999999996e-84  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  59.8 
 
 
615 aa  314  2.9999999999999996e-84  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  49.64 
 
 
536 aa  314  2.9999999999999996e-84  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
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