More than 300 homologs were found in PanDaTox collection
for query gene Rmet_5612 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  79.14 
 
 
513 aa  771    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  100 
 
 
513 aa  1017    Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  62.43 
 
 
581 aa  565  1e-160  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  62.62 
 
 
579 aa  566  1e-160  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  56.47 
 
 
583 aa  545  1e-154  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  55.19 
 
 
552 aa  518  1.0000000000000001e-145  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  54.4 
 
 
595 aa  506  9.999999999999999e-143  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  56.58 
 
 
559 aa  506  9.999999999999999e-143  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_008752  Aave_0227  methyl-accepting chemotaxis sensory transducer  59.1 
 
 
592 aa  487  1e-136  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  52.54 
 
 
569 aa  482  1e-135  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  56.67 
 
 
516 aa  481  1e-134  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  54.3 
 
 
525 aa  481  1e-134  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_011992  Dtpsy_1752  methyl-accepting chemotaxis sensory transducer  52.25 
 
 
523 aa  476  1e-133  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  54.79 
 
 
559 aa  477  1e-133  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1343  methyl-accepting chemotaxis sensory transducer  54.6 
 
 
620 aa  466  9.999999999999999e-131  Acidovorax citrulli AAC00-1  Bacteria  normal  0.244601  normal  0.213177 
 
 
-
 
NC_012917  PC1_3464  methyl-accepting chemotaxis sensory transducer  51.27 
 
 
551 aa  463  1e-129  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  54.6 
 
 
577 aa  463  1e-129  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_013421  Pecwa_3618  methyl-accepting chemotaxis sensory transducer  52.05 
 
 
551 aa  461  9.999999999999999e-129  Pectobacterium wasabiae WPP163  Bacteria  normal  0.453306  n/a   
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  52.22 
 
 
508 aa  459  9.999999999999999e-129  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  48.63 
 
 
580 aa  422  1e-117  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  48.54 
 
 
578 aa  422  1e-116  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  47.98 
 
 
542 aa  409  1e-113  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  47.87 
 
 
592 aa  405  1.0000000000000001e-112  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  49.9 
 
 
586 aa  399  9.999999999999999e-111  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  45.22 
 
 
589 aa  399  9.999999999999999e-111  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  45.7 
 
 
543 aa  396  1e-109  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  48.2 
 
 
537 aa  397  1e-109  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  45.93 
 
 
549 aa  389  1e-107  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  46.5 
 
 
591 aa  386  1e-106  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  68.63 
 
 
551 aa  388  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  50.19 
 
 
594 aa  387  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0172  methyl-accepting chemotaxis sensory transducer  48.1 
 
 
550 aa  387  1e-106  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  47.39 
 
 
584 aa  388  1e-106  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  46.69 
 
 
591 aa  386  1e-106  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  47.74 
 
 
548 aa  386  1e-106  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  50 
 
 
615 aa  385  1e-105  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  50 
 
 
615 aa  385  1e-105  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  47.69 
 
 
585 aa  384  1e-105  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  67.8 
 
 
572 aa  383  1e-105  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  58.46 
 
 
650 aa  382  1e-105  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  43.71 
 
 
554 aa  382  1e-105  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  43.7 
 
 
553 aa  384  1e-105  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  66.77 
 
 
585 aa  379  1e-104  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  47.62 
 
 
587 aa  380  1e-104  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  48.22 
 
 
575 aa  380  1e-104  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  52.11 
 
 
573 aa  378  1e-103  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  59.85 
 
 
608 aa  377  1e-103  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  54.87 
 
 
581 aa  375  1e-103  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  60.56 
 
 
661 aa  378  1e-103  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  66.18 
 
 
608 aa  375  1e-102  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3678  methyl-accepting chemotaxis sensory transducer  65.34 
 
 
605 aa  373  1e-102  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.12372 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  45.61 
 
 
584 aa  372  1e-102  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  66.18 
 
 
608 aa  375  1e-102  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  66.87 
 
 
570 aa  370  1e-101  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  66.56 
 
 
617 aa  370  1e-101  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  48.38 
 
 
613 aa  371  1e-101  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_008390  Bamb_0171  methyl-accepting chemotaxis sensory transducer  66.98 
 
 
648 aa  370  1e-101  Burkholderia ambifaria AMMD  Bacteria  normal  0.451768  n/a   
 
 
-
 
NC_009436  Ent638_2100  methyl-accepting chemotaxis sensory transducer  43.32 
 
 
512 aa  366  1e-100  Enterobacter sp. 638  Bacteria  normal  0.0381834  normal 
 
 
-
 
NC_003296  RS03153  putative methyl-accepting chemotaxis transducer transmembrane protein  70.39 
 
 
524 aa  365  1e-100  Ralstonia solanacearum GMI1000  Bacteria  normal  0.471775  normal  0.0817308 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  67.49 
 
 
600 aa  368  1e-100  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  58.31 
 
 
520 aa  366  1e-100  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1523  methyl-accepting chemotaxis sensory transducer  51.91 
 
 
539 aa  367  1e-100  Burkholderia sp. 383  Bacteria  normal  normal  0.377846 
 
 
-
 
NC_010551  BamMC406_0184  methyl-accepting chemotaxis sensory transducer  67.69 
 
 
648 aa  366  1e-100  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  59.76 
 
 
566 aa  366  1e-100  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.37 
 
 
515 aa  366  1e-100  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  63.37 
 
 
515 aa  367  1e-100  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  67.41 
 
 
584 aa  365  1e-99  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_007510  Bcep18194_A3360  methyl-accepting chemotaxis sensory transducer  66.67 
 
 
655 aa  364  2e-99  Burkholderia sp. 383  Bacteria  normal  0.139099  normal 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  65.33 
 
 
587 aa  365  2e-99  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  54.09 
 
 
596 aa  364  2e-99  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0167  methyl-accepting chemotaxis sensory transducer  70.1 
 
 
659 aa  364  2e-99  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.677561 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  62.94 
 
 
584 aa  364  2e-99  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  45.74 
 
 
557 aa  364  2e-99  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  65.94 
 
 
618 aa  363  4e-99  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  70.39 
 
 
522 aa  362  6e-99  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  70.39 
 
 
522 aa  362  6e-99  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_003296  RSp0303  methyl-accepting chemotaxis transmembrane protein  70.26 
 
 
515 aa  362  8e-99  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0248188 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  67.1 
 
 
598 aa  362  9e-99  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_003295  RSc1460  methyl-accepting chemotaxis transducer transmembrane protein  48.5 
 
 
513 aa  362  1e-98  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.75608 
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  60.8 
 
 
552 aa  361  1e-98  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  56.68 
 
 
652 aa  360  3e-98  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1934  methyl-accepting chemotaxis sensory transducer  46.18 
 
 
560 aa  360  4e-98  Methylobacillus flagellatus KT  Bacteria  normal  0.718562  normal 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  44.57 
 
 
511 aa  359  5e-98  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1955  methyl-accepting chemotaxis protein  70.67 
 
 
685 aa  359  7e-98  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3926  methyl-accepting chemotaxis sensory transducer  63.22 
 
 
539 aa  359  7e-98  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.279293  n/a   
 
 
-
 
NC_008543  Bcen2424_4440  methyl-accepting chemotaxis sensory transducer  63.22 
 
 
539 aa  359  7e-98  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5082  methyl-accepting chemotaxis sensory transducer  47.55 
 
 
589 aa  359  8e-98  Delftia acidovorans SPH-1  Bacteria  normal  0.678642  normal  0.0204532 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  51.4 
 
 
562 aa  359  8e-98  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_010515  Bcenmc03_5865  methyl-accepting chemotaxis sensory transducer  63.22 
 
 
539 aa  359  8e-98  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.439663  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  64.19 
 
 
585 aa  357  1.9999999999999998e-97  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  61.08 
 
 
588 aa  358  1.9999999999999998e-97  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  51.42 
 
 
580 aa  357  1.9999999999999998e-97  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  61.74 
 
 
622 aa  357  1.9999999999999998e-97  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  61.45 
 
 
433 aa  357  2.9999999999999997e-97  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  46.84 
 
 
576 aa  357  2.9999999999999997e-97  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  52.93 
 
 
565 aa  356  3.9999999999999996e-97  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  52.98 
 
 
614 aa  356  5e-97  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_010622  Bphy_2972  methyl-accepting chemotaxis sensory transducer  70 
 
 
597 aa  356  5e-97  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00113075 
 
 
-
 
NC_010552  BamMC406_4332  methyl-accepting chemotaxis sensory transducer  62.24 
 
 
545 aa  356  5e-97  Burkholderia ambifaria MC40-6  Bacteria  normal  0.167851  normal 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  61.31 
 
 
520 aa  356  5.999999999999999e-97  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
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