More than 300 homologs were found in PanDaTox collection
for query gene Rpic_4696 on replicon NC_010678
Organism: Ralstonia pickettii 12J



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  100 
 
 
608 aa  1205    Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  77.81 
 
 
600 aa  828    Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  100 
 
 
608 aa  1205    Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  60.35 
 
 
615 aa  547  1e-154  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  60.35 
 
 
615 aa  547  1e-154  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  58.59 
 
 
608 aa  518  1.0000000000000001e-145  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_010515  Bcenmc03_5635  methyl-accepting chemotaxis sensory transducer  56.34 
 
 
519 aa  501  1e-140  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.264146  normal  0.57201 
 
 
-
 
NC_008061  Bcen_3703  methyl-accepting chemotaxis sensory transducer  56.34 
 
 
519 aa  500  1e-140  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.627885  n/a   
 
 
-
 
NC_008543  Bcen2424_4665  methyl-accepting chemotaxis sensory transducer  56.34 
 
 
519 aa  500  1e-140  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0344145  normal  0.449012 
 
 
-
 
NC_010552  BamMC406_4511  methyl-accepting chemotaxis sensory transducer  56.53 
 
 
519 aa  498  1e-139  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A1280  methyl-accepting chemotaxis protein  57.7 
 
 
518 aa  494  9.999999999999999e-139  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1358  methyl-accepting chemotaxis protein  57.7 
 
 
518 aa  494  9.999999999999999e-139  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2534  methyl-accepting chemotaxis protein  57.7 
 
 
518 aa  494  9.999999999999999e-139  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1158  methyl-accepting chemotaxis sensory transducer  56.14 
 
 
519 aa  494  9.999999999999999e-139  Burkholderia sp. 383  Bacteria  normal  normal  0.220586 
 
 
-
 
NC_007650  BTH_II1464  methyl-accepting chemotaxis protein  57.31 
 
 
518 aa  493  9.999999999999999e-139  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4055  methyl-accepting chemotaxis sensory transducer  56.53 
 
 
519 aa  494  9.999999999999999e-139  Burkholderia ambifaria AMMD  Bacteria  normal  0.242338  normal  0.634618 
 
 
-
 
NC_010086  Bmul_4025  methyl-accepting chemotaxis sensory transducer  55.95 
 
 
519 aa  485  1e-136  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.987625  normal 
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  55.58 
 
 
588 aa  486  1e-136  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_003296  RSp0303  methyl-accepting chemotaxis transmembrane protein  57.89 
 
 
515 aa  484  1e-135  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0248188 
 
 
-
 
NC_006349  BMAA1298  methyl-accepting chemotaxis protein  56.6 
 
 
530 aa  481  1e-134  Burkholderia mallei ATCC 23344  Bacteria  normal  0.09541  n/a   
 
 
-
 
NC_008784  BMASAVP1_0277  methyl-accepting chemotaxis protein  56.6 
 
 
530 aa  481  1e-134  Burkholderia mallei SAVP1  Bacteria  normal  0.121986  n/a   
 
 
-
 
NC_008835  BMA10229_0548  methyl-accepting chemotaxis protein  56.6 
 
 
530 aa  481  1e-134  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1408  methyl-accepting chemotaxis sensory transducer  53.7 
 
 
513 aa  476  1e-133  Ralstonia pickettii 12D  Bacteria  normal  0.0312904  normal  0.0311205 
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  55.47 
 
 
601 aa  478  1e-133  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2494  methyl-accepting chemotaxis sensory transducer  54.47 
 
 
514 aa  462  1e-129  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  51.17 
 
 
570 aa  461  9.999999999999999e-129  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_007974  Rmet_3678  methyl-accepting chemotaxis sensory transducer  53 
 
 
605 aa  458  1e-127  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.12372 
 
 
-
 
NC_003295  RSc1460  methyl-accepting chemotaxis transducer transmembrane protein  53.68 
 
 
513 aa  453  1.0000000000000001e-126  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.75608 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  54.96 
 
 
522 aa  448  1.0000000000000001e-124  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  54.96 
 
 
522 aa  448  1.0000000000000001e-124  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_010622  Bphy_1232  methyl-accepting chemotaxis sensory transducer  53.64 
 
 
595 aa  442  1e-123  Burkholderia phymatum STM815  Bacteria  normal  0.0384777  normal  0.175298 
 
 
-
 
NC_007510  Bcep18194_A4750  methyl-accepting chemotaxis sensory transducer  55.08 
 
 
612 aa  440  9.999999999999999e-123  Burkholderia sp. 383  Bacteria  normal  normal  0.445402 
 
 
-
 
NC_007651  BTH_I2470  methyl-accepting chemotaxis protein  55.62 
 
 
616 aa  442  9.999999999999999e-123  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A2023  methyl-accepting chemotaxis sensory transducer  48.93 
 
 
538 aa  439  9.999999999999999e-123  Burkholderia xenovorans LB400  Bacteria  normal  0.205381  normal 
 
 
-
 
NC_010625  Bphy_6386  methyl-accepting chemotaxis sensory transducer  51.57 
 
 
542 aa  439  1e-121  Burkholderia phymatum STM815  Bacteria  normal  normal  0.864566 
 
 
-
 
NC_010508  Bcenmc03_1588  methyl-accepting chemotaxis sensory transducer  50.57 
 
 
588 aa  438  1e-121  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.834305  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  46.51 
 
 
596 aa  432  1e-120  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1131  methyl-accepting chemotaxis sensory transducer  55.2 
 
 
588 aa  434  1e-120  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1611  methyl-accepting chemotaxis sensory transducer  55.2 
 
 
588 aa  434  1e-120  Burkholderia cenocepacia HI2424  Bacteria  normal  0.542582  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  46.59 
 
 
572 aa  432  1e-119  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_010681  Bphyt_2245  methyl-accepting chemotaxis sensory transducer  47.7 
 
 
524 aa  432  1e-119  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_1527  methyl-accepting chemotaxis sensory transducer  54.42 
 
 
587 aa  427  1e-118  Burkholderia ambifaria MC40-6  Bacteria  normal  0.512784  normal  0.576949 
 
 
-
 
NC_007434  BURPS1710b_2024  methyl-accepting chemotaxis protein I  55.04 
 
 
634 aa  421  1e-116  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1872  methyl-accepting chemotaxis protein  55.04 
 
 
626 aa  422  1e-116  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  44.73 
 
 
617 aa  416  9.999999999999999e-116  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_1859  methyl-accepting chemotaxis protein  54.84 
 
 
621 aa  417  9.999999999999999e-116  Burkholderia pseudomallei 668  Bacteria  normal  0.674726  n/a   
 
 
-
 
NC_003296  RS03153  putative methyl-accepting chemotaxis transducer transmembrane protein  54.34 
 
 
524 aa  415  1e-114  Ralstonia solanacearum GMI1000  Bacteria  normal  0.471775  normal  0.0817308 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  48.54 
 
 
618 aa  412  1e-114  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  71.94 
 
 
515 aa  407  1.0000000000000001e-112  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_008390  Bamb_1508  methyl-accepting chemotaxis sensory transducer  54.76 
 
 
587 aa  408  1.0000000000000001e-112  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2020  histidine kinase, HAMP region: chemotaxis sensory transducer  49.04 
 
 
521 aa  404  1e-111  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  71.64 
 
 
515 aa  404  1e-111  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_010678  Rpic_4051  methyl-accepting chemotaxis sensory transducer  61.15 
 
 
634 aa  400  9.999999999999999e-111  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0620  methyl-accepting chemotaxis sensory transducer  48.11 
 
 
549 aa  401  9.999999999999999e-111  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0437284 
 
 
-
 
NC_012857  Rpic12D_4163  methyl-accepting chemotaxis sensory transducer  61.15 
 
 
634 aa  400  9.999999999999999e-111  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0171  methyl-accepting chemotaxis sensory transducer  48.73 
 
 
648 aa  401  9.999999999999999e-111  Burkholderia ambifaria AMMD  Bacteria  normal  0.451768  n/a   
 
 
-
 
NC_010676  Bphyt_5735  methyl-accepting chemotaxis sensory transducer  52.44 
 
 
510 aa  397  1e-109  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0480332  normal 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  85.33 
 
 
513 aa  396  1e-109  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_007510  Bcep18194_A3360  methyl-accepting chemotaxis sensory transducer  48.53 
 
 
655 aa  396  1e-109  Burkholderia sp. 383  Bacteria  normal  0.139099  normal 
 
 
-
 
NC_007951  Bxe_A4080  methyl-accepting chemotaxis sensory transducer  48.55 
 
 
549 aa  396  1e-109  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0167  methyl-accepting chemotaxis sensory transducer  48.42 
 
 
659 aa  394  1e-108  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.677561 
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  80.7 
 
 
515 aa  395  1e-108  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  84.94 
 
 
513 aa  394  1e-108  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2520  methyl-accepting chemotaxis sensory transducer  46.47 
 
 
542 aa  393  1e-108  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.128174 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  84.94 
 
 
513 aa  394  1e-108  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_010551  BamMC406_0184  methyl-accepting chemotaxis sensory transducer  48.35 
 
 
648 aa  390  1e-107  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  48.27 
 
 
589 aa  390  1e-107  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  45.12 
 
 
535 aa  384  1e-105  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0240  methyl-accepting chemotaxis sensory transducer  47.5 
 
 
657 aa  384  1e-105  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0244017  normal 
 
 
-
 
NC_010622  Bphy_2972  methyl-accepting chemotaxis sensory transducer  48.41 
 
 
597 aa  385  1e-105  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00113075 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  66.18 
 
 
513 aa  384  1e-105  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  48.37 
 
 
559 aa  379  1e-104  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_008060  Bcen_2849  methyl-accepting chemotaxis sensory transducer  48.57 
 
 
659 aa  382  1e-104  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0258  methyl-accepting chemotaxis sensory transducer  48.57 
 
 
659 aa  382  1e-104  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.00414638  n/a   
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  66.87 
 
 
551 aa  377  1e-103  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  48.67 
 
 
580 aa  378  1e-103  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  48.16 
 
 
583 aa  378  1e-103  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  48.12 
 
 
578 aa  378  1e-103  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_010676  Bphyt_6422  methyl-accepting chemotaxis sensory transducer  44.77 
 
 
514 aa  376  1e-103  Burkholderia phytofirmans PsJN  Bacteria  normal  0.756011  normal 
 
 
-
 
NC_010622  Bphy_0345  methyl-accepting chemotaxis sensory transducer  47.02 
 
 
547 aa  375  1e-103  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA2857  methyl-accepting chemotaxis protein, putative  47.88 
 
 
673 aa  374  1e-102  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3853  methyl-accepting chemotaxis protein II  47.88 
 
 
671 aa  373  1e-102  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0074  methyl-accepting chemotaxis protein I  47.88 
 
 
673 aa  374  1e-102  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3118  putative methyl-accepting chemotaxis protein  47.88 
 
 
673 aa  375  1e-102  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0285227  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  46.75 
 
 
542 aa  372  1e-102  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3934  methyl-accepting chemotaxis protein  47.88 
 
 
673 aa  374  1e-102  Burkholderia pseudomallei 1106a  Bacteria  normal  0.3175  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3433  putative methyl-accepting chemotaxis protein  47.88 
 
 
673 aa  374  1e-102  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1686  putative methyl-accepting chemotaxis protein  47.88 
 
 
673 aa  375  1e-102  Burkholderia mallei NCTC 10229  Bacteria  normal  0.303273  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  43.27 
 
 
579 aa  370  1e-101  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  58.1 
 
 
566 aa  370  1e-101  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  44.12 
 
 
549 aa  369  1e-101  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  67.17 
 
 
513 aa  368  1e-100  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  45.56 
 
 
575 aa  367  1e-100  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_007651  BTH_I3180  methyl-accepting chemotaxis protein, putative  48.07 
 
 
666 aa  367  1e-100  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  57.81 
 
 
580 aa  368  1e-100  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  59.88 
 
 
562 aa  366  1e-100  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  58.84 
 
 
552 aa  365  1e-99  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  44.62 
 
 
594 aa  363  4e-99  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  42.8 
 
 
532 aa  363  6e-99  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  57.42 
 
 
552 aa  362  1e-98  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>