Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0258 |
Symbol | |
ID | 4447952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 297951 |
End bp | 299930 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639692266 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_833905 |
Protein GI | 116688282 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00414638 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGCATA ACTGGTCGAT CCGCACGACG CTCACGGCGG TCGGACTCAT CCTCGTGTGC CTGGCCGCCG CGGTCGGCGG GCTCGGCCTT TACGCGCTGA ATCACGCGAG CCGTTCGCTC GACGAGATCG CGCACGTCGA CCTGCCGGCG ATCCACACGC TGGACGACAC GGCCGCGTAC CTGCTGCGCT CGCGCGTCGC GCTCGATCGC TTTCGTACGC TGACCGAAGC CGGCAATGCG GCCGACGCGG CGAAGGTGCT CGACCGCGCG CAGGAGCTGT ATGCGAAGTC GAACCAGAAC TGGCAGACGT TCCAGTCGAC GCCGAAGCTC GGCGTCGAGC AGGCGCTCGT CGACGAGCTC ACCGCGCGTT ACGCGACGAT CATGAAGGAA GGCGTCGAAC CGGAATTCGC CGCGGCGCGC GCGGGCGACA TGGCCGCGTA CCACGCGATC GCCGACGCGA AGATCAGCCC GATGTTCGTC GCGTTCGACC AGACGGCGGC GGCCGTGATC GCCGCGCTGC AAAAGCGCGC GGAAGAACGC CAGGCCGCGA CGCAGTCGCA GATCTCGATG ATGATCGCGC TGATCGCGGC CGGCATCGCG CTCGCGTTCG TCGTCGTGAT CGCGATCCGC TTCGTTCTGC GCGGGCTGAT CGTCCAGCCG ATCGAGGACG CGATCGCGCA CTTCGAGCGC ATCGCCGGCG GCGATCTCAC GCAACCGGTG AGCGTGTTCA GCACGAACGA GATCGGCCGC CTGTTCGGCG GCATCAAGCG GATGCAGGAC GCCGTCACGA CGATGGTGCA GGCCGTGCAT CGCGGCACCG AATCGATCGA CGTCGGCGCG CGCGAGATCG CGAGCGGCAA CATCGACCTG TCGCAGCGCA CCGAGGAGCA GGCCGCCTCG CTGCAGGAAA CCGCATCGAG CATGGAGCAG CTGACGGGCA CCGTGCGGCA GAACGCGGAA AACGCGCGGC AGGCGAGCCA GCTCGCGGTG AACGCGTCGG ACATCGCGAC GCAGGGCGGC GACGTGGTCG GCCAGGTCGT GTCGACGATG CAGGACATCG CGGCGAGCTC GGGCAAGGTC GTCGACATCA TCGGCACGAT CGAGGGCATC GCGTTCCAGA CCAACATCCT CGCGCTGAAC GCGGCCGTCG AAGCGGCGCG GGCCGGCGAG CAGGGCCGCG GCTTCGCGGT GGTCGCGGGC GAGGTGCGTT CGCTCGCGCA GCGCAGCGCG AGCGCCGCGA AGGAAATCAA GCAGTTGATC GGCGATTCGG CCGAGAAGGT CGACAGCGGG TCGGCGCTCG TCGCGCGCGC CGGCGCGACG ATGGACGAGA TCGTGCAGGC GGTGCGCCGC GTGACCGACA TCATGGGCGA GATCAGCGCG GCCTCCGACG AGCAGTCGAC CGGCATCGAG CAGGTCAACC GTGCGGTCGG CCAGATGGAT GCGGTCACGC AGCAGAACGC GGCGCTCGTC GAGCAGGCGG CCGCCGCGGC CGCGTCGCTC GAGGAGCAGA CGCGCCAGAT GAAGGCGATC GTGTCGGGCT GGCGCGTCGC GGGCGGCATC GCGCTCGCGC CGACGCGCGG CGTCGCGCGG CCGGTGGCCC ACGAACCGGC GGCGCTGCCG TCGGACGTGC GCCACGACGC GCCGGTCGCC GCGCTGCCGG CGCCGGCAGC GGCTCAACCG GCCGCACGGC GCGGCGCGCC GGCATCGCGT GCCGCTGCCC CCGCAACTGC GGGCGCGGGC GCCGCGGCAG CGGCCGCCGA ACCGAAGCGT GCGGCCGATG CGGCCGCGCG CACGCAGAAG GACGCACCGG CTGCCCGTGG CGGTACCGCC GCGGGCGGCT ACGGCCCGCG TCTCGCGAAG ACGGCCGCCG CGGCGGACAA GCCGGCCGCG AAGCCCGCGC TCGTGCGCCC GGCGCTGAAC GGCGAGAAGC CGGCGCTGGC CGCCGCCGGC GCGTCGGACG ACGACTGGGA GACCTTCTAA
|
Protein sequence | MLHNWSIRTT LTAVGLILVC LAAAVGGLGL YALNHASRSL DEIAHVDLPA IHTLDDTAAY LLRSRVALDR FRTLTEAGNA ADAAKVLDRA QELYAKSNQN WQTFQSTPKL GVEQALVDEL TARYATIMKE GVEPEFAAAR AGDMAAYHAI ADAKISPMFV AFDQTAAAVI AALQKRAEER QAATQSQISM MIALIAAGIA LAFVVVIAIR FVLRGLIVQP IEDAIAHFER IAGGDLTQPV SVFSTNEIGR LFGGIKRMQD AVTTMVQAVH RGTESIDVGA REIASGNIDL SQRTEEQAAS LQETASSMEQ LTGTVRQNAE NARQASQLAV NASDIATQGG DVVGQVVSTM QDIAASSGKV VDIIGTIEGI AFQTNILALN AAVEAARAGE QGRGFAVVAG EVRSLAQRSA SAAKEIKQLI GDSAEKVDSG SALVARAGAT MDEIVQAVRR VTDIMGEISA ASDEQSTGIE QVNRAVGQMD AVTQQNAALV EQAAAAAASL EEQTRQMKAI VSGWRVAGGI ALAPTRGVAR PVAHEPAALP SDVRHDAPVA ALPAPAAAQP AARRGAPASR AAAPATAGAG AAAAAAEPKR AADAAARTQK DAPAARGGTA AGGYGPRLAK TAAAADKPAA KPALVRPALN GEKPALAAAG ASDDDWETF
|
| |