Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02605 |
Symbol | RSp1099 |
ID | 1223411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1392819 |
End bp | 1394360 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637240964 |
Product | putative methyl-accepting chemotaxis transducer transmembrane protein |
Protein accession | NP_522660 |
Protein GI | 17549320 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0414906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0642458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGAC TCACGCTTCG GCAGAAGCTG TGGCTTCCGC TCGTCCTGAG CTGGCTGGGA TTGCTGGCGA TCACGCTATG GAGTGCCTGG AGCGCACGCA CGCTGCGCAT GGAAGAGCGG CAGCGCGACC TGCAGAATGT GAGCGCCACG GCATTCAGCG TCATCAAGGA ATACGGCCAG CTCGCGCAGG AAGGCAAGAT GACGGTGGAA GAGGCCAAGG CGCAGACGAT GGCCCGCTTG AAAACCATGC GCTATGGCGC CGACGGCTAT TTCTCGCTGT CGACCACGGA TGCGGTCTCG GTCATGCATC CGATCAAGCC GGAAATGGTC GGCAAGAACA TGTCCGCCGT CACCGATCCG GCCGGCAATC ACCTGTTCAC CGACATCGCC CGCACCGCCA AGGCCGGCGG CGGGTTCGTG CGCTATCTGT GGCCGAAGCC CGGCAGCAGC ACCCCGGAGC CCAAGCTGAC CTACGTCGCG TACTACCAGC CCTGGGACTG GTCCATGACG ACCGGCCTGT ATATCGACGA CGTCGACGCG GCGTTCCGCG CCTCACTGCT GCAGTCGTTG GGGCTGCTGC TGGGCGTCGG CCTGCTGATG ACGCTCGTGG TGGCGACGCT CGCGCGGGGC CTGCAGCGCC AGTTGGGCGG GGATCCGGCC TATGCCGCCG ATATCGCGGC GCGGATTGCC GCGGGCGATC TGGCCATGCG CGTCGAAACC CGTCCGGGGG ATCGCGACAG CGTCCTGTTC GCCATGGCGC AGATGCAGCG GGAACTGACG GGCACCATCA GCCACATCAA GCATTCGGCG GATTCGATCG CCAGCGCCAC CCAGCAGATC GCCGCCGGCA ACGCCGACCT GTCGCAGCGT ACCGAACAGC AGGCTTCGTC GCTGGAGGAA ACGGCCTCCA GCATGGAGGA GCTGACCTCG ATCGTGAAGC AGAACGCGGA CAACGCACGC CAGGCGAGCA CGCTGGCGGT CAATGCCTCG GACGTCGCGG TCAAGGGCGG CGAAGTGGTG GGCCGCGTGG TCGAGACCAT GGCCGGCATC AACGACAGCA GCAAGAAGAT CGCCGACATC ATCGGCGTGA TCGAGGGCAT TGCATTCCAG ACCAACATCC TGGCGCTGAA CGCGGCGGTG GAAGCGGCCC GGGCCGGCGA GCAGGGTCGT GGCTTCGCGG TGGTGGCGGG CGAGGTGCGC AGCCTGGCGC AGCGCTCGGC GGGGGCGGCC AAGGAGATCA AGGAACTGAT CGGCGACTCG GTCGGCCGTG TCCGGAACGG CACTGCGCTG GTGGAGGAGG CCGGGGCTGT GATTGATGAG GTCGTCGTGG CCGTCAAGCG CGTGACGGAC ATCATGGGTG AGATCAGCGC CGCATCGGCC GAGCAGAGCT CGGGCATCGA GCAGGTCAAT CAGGCCGTGA ACCAGATGGA TCAGGTGACG CAGCAGAACG CGGCCCTGGT GGAGCAGGCA GCGGCCGCCG CATTGTCGCT GGAAGAGCAG GCGCAGGTGT TGCGTACGGC AGTGGGCCGC TTCCAGATGT AA
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Protein sequence | MNRLTLRQKL WLPLVLSWLG LLAITLWSAW SARTLRMEER QRDLQNVSAT AFSVIKEYGQ LAQEGKMTVE EAKAQTMARL KTMRYGADGY FSLSTTDAVS VMHPIKPEMV GKNMSAVTDP AGNHLFTDIA RTAKAGGGFV RYLWPKPGSS TPEPKLTYVA YYQPWDWSMT TGLYIDDVDA AFRASLLQSL GLLLGVGLLM TLVVATLARG LQRQLGGDPA YAADIAARIA AGDLAMRVET RPGDRDSVLF AMAQMQRELT GTISHIKHSA DSIASATQQI AAGNADLSQR TEQQASSLEE TASSMEELTS IVKQNADNAR QASTLAVNAS DVAVKGGEVV GRVVETMAGI NDSSKKIADI IGVIEGIAFQ TNILALNAAV EAARAGEQGR GFAVVAGEVR SLAQRSAGAA KEIKELIGDS VGRVRNGTAL VEEAGAVIDE VVVAVKRVTD IMGEISAASA EQSSGIEQVN QAVNQMDQVT QQNAALVEQA AAAALSLEEQ AQVLRTAVGR FQM
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