Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A2534 |
Symbol | cheD1 |
ID | 3692562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 3051185 |
End bp | 3052741 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637732788 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_337684 |
Protein GI | 76819664 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCCT TTTTTTCCCG CTTCTCGATT CGCACCCGGA TCTTCTCGAC GCTCGGGCTC GTTGCCGCGC TGCTGACGAT CACCGGCGTG ATCGGCTTCT TCAGCATGCA GAACTCGAAC GCCGCGCTCG ACGACGCGTA CACGCGGCAA CTCGCGGCGA AGACGGCGCT CGCGTCGGCG AGCCTCAATC TCGCGATCAC GCGCACGACG CTCGACCGCG TGATCCTGCA TCCGGAGGTA CCCGACGCGG CGAACACGAT CGCGAAGGCG GAGCAGTATC TGGCCGCGTC GGAGCGCGGC TGGCGCGACT ATGAGGCACT GCCGCGCGGC GACGACGAAA AGACGCTCGC GGCTCAGGCG AACGCCGCGC GCCGCGCACT CGCCGACGAG GCGCTCAAGC CGATGATCGA CGCGCTGAAG GCCGGCCGGC ACGACGAAGC CGATCGCCTG ATGATGACGG TCGCGCCGCC GCTGTCGGTC GCGTGGACGA AGGCGACGAA CGCGCTCGAC GACGCGCGCG CCGCGTATGG CAAGGCCGCG TATGACGACG CCGAGCAAAT GTACGGCTGG CTGCGGCTCG TCCTCGGCGG GCTGATCGTG TTCGGCCTGG CCGCGTGCCT CGGCTGCGCG ATCGGCCTGC ACTTCGCGAT CACGCAGCCG CTCGTGCGCA TCCTCGGGCA CCTGCGCCGC CTGTCGGACG GCGATCTGAC GGGCGAGCTG CGCTGGACGT CGCACGACGA AATGGCCGAG CTCGTCAGCG GCCTCACGAC GATGCAGCGC AGCCTGTCGG AGACCGTGCG CAAGGTGACG GACGGCTCCG AATCGATCGC GACCGCGACG CGCCAGATCG CGGCCGGCAA CACCGATCTG TCGCAGCGCA CCGAGGAGCA GGCGGCCGCG CTGCAGCAGA CGGCGGCGAG CATGGAGCAA TTGACCGCGA CGGTGAAGCA GAACGCGGAC AACGCACGCG AGGCGCAGAA CTGCGCGGAC AACGCGACCG ATATCGCGAC GAAGGGCGCG ACGGTCGTCG GCGAGGTGGT CGGCACGATG GCCGAGATCG ACCAGAGCTC GCAGAAGGTG GCCGACATCA TCGGCACGAT CGAGGGGATC GCGTTCCAGA CCAACATCCT CGCGCTGAAC GCGGCCGTCG AGGCGGCGCG CGCGGGCGAG CAGGGCCGCG GCTTCGCGGT GGTCGCGGGC GAGGTGCGCA CGCTCGCGCA GCGCTCCGCG TCGGCGGCCA AGGAGATCAA GGCGCTGATC GGCGAATCGG TCGAGCGGGT CGCGACGGGC TCGCGGCTCG TCGGCTCGGC GGGCGACACG ATGCAGGAGA TCCAGCGCGC GATCGCGCGC GTGACGGGCA TCATGACCGA GATCTCGGCC GCGTCGAACG AGCAGCGCGA CGGCATCGAG CAGGTGAACC GCGCCGTCTC GCAGATGGAT CAGGTGTCGC AGCAGAACGC GGCGCTCGTC GAGCAGGCGG CGGCGGCCGC CGCGTCGCTC GAGGAGCAGG CGGACGGGCT GCGCCGCACG GTCGGCGCGT TCCGCGTCGT CGCCTGA
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Protein sequence | MNAFFSRFSI RTRIFSTLGL VAALLTITGV IGFFSMQNSN AALDDAYTRQ LAAKTALASA SLNLAITRTT LDRVILHPEV PDAANTIAKA EQYLAASERG WRDYEALPRG DDEKTLAAQA NAARRALADE ALKPMIDALK AGRHDEADRL MMTVAPPLSV AWTKATNALD DARAAYGKAA YDDAEQMYGW LRLVLGGLIV FGLAACLGCA IGLHFAITQP LVRILGHLRR LSDGDLTGEL RWTSHDEMAE LVSGLTTMQR SLSETVRKVT DGSESIATAT RQIAAGNTDL SQRTEEQAAA LQQTAASMEQ LTATVKQNAD NAREAQNCAD NATDIATKGA TVVGEVVGTM AEIDQSSQKV ADIIGTIEGI AFQTNILALN AAVEAARAGE QGRGFAVVAG EVRTLAQRSA SAAKEIKALI GESVERVATG SRLVGSAGDT MQEIQRAIAR VTGIMTEISA ASNEQRDGIE QVNRAVSQMD QVSQQNAALV EQAAAAAASL EEQADGLRRT VGAFRVVA
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