Gene BURPS1710b_2024 details

Gene Information

• Locus tag: BURPS1710b_2024
• Symbol: cheD1
• ID: 3691387
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: +
• Start bp: 2192154
• End bp: 2194058
• Gene Length: 1905 bp
• Protein Length: 634 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637728480
• Product: methyl-accepting chemotaxis protein I
• Protein accession: YP_333419
• Protein GI: 76811369
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGACGCC TCACAGGAAG AATCATGCTG CTGAAGAACA TCACGATCAG AGCGCGCCTC 
GCCGTCACGA TGGCGCTCCT TTCCGTCCTG CTGTGCGCCG TCGGTGCGCT CGGCCTCTTC 
GGCATGAGCC GGGCCAACGA CGCGAACGAG CAAACGTCGT CGAATCAACT GCCGAGCGCG 
ATCGACGTGG CGAGCGCGGA GTTGTTCGCC GCCCGAGAGC GCCTCGTGCT CGATCGCGCG 
GCGCTCCTCG CGGGCACGCC GGACGTCGCG CCGACGATCG AGCGCGCGCG CCAGATGCGC 
GGAGTCTCCG ATTCGTGGTG GAAAAAATAC CTCGACCTGC CGCGCGACGC GCAGGAGGAC 
CGCCTCGCGC AGGACCTCGC GTCGAAACGG CAGATTCTGC AGCGTGAGCT CGACGCGGCC 
GCCGCGTTGA TCAACGCGAA CGATCGCGAC AGAATCCTCG AATCCGCCAA GCGGATGCAG 
AACGTATTCA ACGATTTCTC GCTGGCGAGC GAGGCGCTGC GCGCGTTTCA GCTCAAGCAG 
GCGAGCGTCA ACTTCAGCGA TGCGCAAAGC GTATACGCGG CGAGCCGGGT CGCCAGCATC 
GCCGCGCTCG CGCTCGGCCT CGCGCTCTCG CTGTACTGCT TCCTGAGCCT GCGCGCGGCG 
ATCGCCCGGC CGCTCGCCGA CGCGCTCGGT CATTTCGACG CGATCGCCGC GGGCGAGCTG 
CGCCGCCCGA TCGTCGTCGA ACGGCGCGAC GAGATGGGCC TGCTGCTCGA AGGGCTCGCG 
AAGATGCAGG CAAGCCTCGC GGGCACCGTG CGCGCGGTGC GCGTCGGCAG CGAATCGATC 
GCGACGGCGG CCCGGCAGAT CGCGGCGGGC AACATCGATC TGTCCTCGCG CACCGAGGAG 
CAGGCGGCGG CGCTCGAACA GACGGCGTCG AGCATGGAGG AACTGACGGG CACGGTGCGG 
CGCAACGCGG ATAACGCGCG GCAGGCGAGC GCGCTCGCGG CGAGCGCGTC GGAGATCGCG 
AACAAGGGCA ACGCGGTGGT CGGCCAGGTG GTCGGCACGA TGGGCGACAT CAACCAGAGC 
TCCGCGAAGA TCGCCGACAT CATCACGATC ATCGAGGGAA TCGCGTTCCA GACCAACATC 
CTCGCGCTGA ACGCGGCGGT CGAGGCGGCG CGCGCGGGCG AGGAAGGGCG CGGCTTCGCG 
GTCGTCGCGG GCGAGGTGCG CAGCCTCGCG CAGCGTTCGT CGACGGCCGC CAAGGAGATC 
AAGGAGCTGA TCGACACGTC GGTCGAGCGC GTGCGCACGG GCTCCATGCT CGTCGACGAC 
GCGGGACGCA CGATGAGCGA GGTGATCGGC GCGGTGCGGC GCGTGACCGA CATCATGGGC 
GAGATCGCGG CGGCCTCGGA CGAGCAGAGC ACCGGCATCG ACCAGGTGTC GCGCGCCGTA 
TCGCAGATGG ACGAGGTCAC GCAGCAGAAC GCGGCGCTCG TCGAGCAGGC CGCGGCGGCC 
GCGCAATCGC TCGACGAGCA GGCCGCGCGG CTGCGCGCGA CCGTTTCGGT GTTCCATGTC 
GATGACGGCG ATGCGCGCGA TGTCGCCTCG CGCCCGCCGG CTCGGCCGGG GGGCGGCGCC 
GTGCACCGGG CGGCGGGCGC GGCCGCGCCG GCGCAGGCCG GCGCGTCTTC GGGCGCGCAC 
GCCGCGCCGG CGGCGTATGC GGCGCGCAAG CCCGCGCCGT CCGCTGCGCT CGCGAAAGCC 
GCGCCTGTTG CGTCCGTTAC ATCCGCTGCA TCCGTTACGC CCGCTGCGTC TGCGCCGACG 
CTTGCCGCGG CAGCGGCGAC GCCCAAACCC GCGCCCGCCG CGCCGCGCGC CGGGTCGGTT 
ACTGCGGCGT CCGCCGCGAG CGACGACGAT TGGGAGACCT TCTAA 

 

Protein sequence

MRRLTGRIML LKNITIRARL AVTMALLSVL LCAVGALGLF GMSRANDANE QTSSNQLPSA 
IDVASAELFA ARERLVLDRA ALLAGTPDVA PTIERARQMR GVSDSWWKKY LDLPRDAQED 
RLAQDLASKR QILQRELDAA AALINANDRD RILESAKRMQ NVFNDFSLAS EALRAFQLKQ 
ASVNFSDAQS VYAASRVASI AALALGLALS LYCFLSLRAA IARPLADALG HFDAIAAGEL 
RRPIVVERRD EMGLLLEGLA KMQASLAGTV RAVRVGSESI ATAARQIAAG NIDLSSRTEE 
QAAALEQTAS SMEELTGTVR RNADNARQAS ALAASASEIA NKGNAVVGQV VGTMGDINQS 
SAKIADIITI IEGIAFQTNI LALNAAVEAA RAGEEGRGFA VVAGEVRSLA QRSSTAAKEI 
KELIDTSVER VRTGSMLVDD AGRTMSEVIG AVRRVTDIMG EIAAASDEQS TGIDQVSRAV 
SQMDEVTQQN AALVEQAAAA AQSLDEQAAR LRATVSVFHV DDGDARDVAS RPPARPGGGA 
VHRAAGAAAP AQAGASSGAH AAPAAYAARK PAPSAALAKA APVASVTSAA SVTPAASAPT 
LAAAAATPKP APAAPRAGSV TAASAASDDD WETF