| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1620 |
|---|
| Symbol | |
|---|
| ID | 3673005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 1703684 |
|---|
| End bp | 1705363 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637710307 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_315378 |
|---|
| Protein GI | 74317638 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.439493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.532508 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGATCG GCGCTCGGCT CGGGCTGGGT TTTGCGAGTG TCCTGCTGCT GTTGGTCGTG
GTGGCGGTGA TTGGCGTCTG GCGCCTGCAG ACGGTCGGAA TGATGACCGA CTCGCTGGTC
AAGAATGAAA TGCACAAGGC GCGCATCATC AATGAGTGGG AAAGCATCAT CAATGCCAAT
GCGGTAAGAG CCCTCGCGGC GGCCAAGACC AATAATCCGG AAACCGAAAA ATTTTTCGTG
GACGCGAGTG CCGCGGCCAG CAAGGGCGGC ATCGCATTGC AGAAACAGCT CGAGTCGCTG
CTCACGGACG CGGAATCCAG GGCCCTGTTC GCGGCCATCG CGGACAAGCG TAGCGCTTAC
CTCGCGGCGC GCGACGCCGC GCTCAAGGAA AAAGCGGCCG GGAATGTTCT GGGCGCAAAG
AAGTTCGTCG ATGAAGACAT GAAGCCCAGG CTGGATGCGT ATCTGGAGAG CCTGCACGAC
CTTGCGCGCT ATCAGAAGCA GGCTATCGAT GCGACCGCAG GGAATATCCA TCGGCAGTAT
GAAAGCGGCC GGATGCTGTT GATCGGTTTG AGCATCGTGG CGCTCATGAT GGGAATCGGC
TTCGCGTTCT GGATCACGCG CTCGATCACG CGCCCGATGA ACCAGGCGGT GAAGGTTGCG
CAGACGGTGG CCGCCGGCGA CCTGACGAGC CGCATCGAGG TGGAAGGCAA GGATGAAACG
GGCCGATTGC TGCAGGCGCT GAAGGACATG AATGACAGTC TGGTGAAGAT TGTCGGCCAG
GTACGCCTCG GCACCGACGC CATCGCCACC GCCTCGAGCG AGATTGCGAC GGGGAACCTG
GATCTGTCGA GCCGGACGGA AGAACAGGCA AGTTCTCTGG AAGAGACCGC TTCCTCGATG
GAACAGCTCA CCTCGACGGT GAAGCAGAAC GCGGACCATG CGCGCCAGGC GAATCAGATG
GCGGTCTCGG CCAGCGAAGT GGCGGTCAAG GGCGGAGCGG TCGTCGCGCA AGTGGTCGAC
ACCATGGGCT CGATCAACGA GTCTTCAAGG AAAATCGTCG ACATCATCGC CGTGATCGAC
GGCATCGCGT TTCAGACCAA CATTCTGGCG CTCAATGCGG CGGTGGAAGC GGCGCGAGCG
GGCGAACAGG GGCGGGGCTT CGCGGTGGTT GCCAGCGAGG TACGCAGCCT CGCGCAGCGC
AGTGCGGGTG CGGCCAAGGA AATCAAAACC CTGATAGGCG ATTCGGTGGA GAAGGCCGAC
ATAGGCAGCA AACTGGTCGG TCAGGCGGGC GCCACCATGG ACGAGATCGT GGCCAGCGTG
AAGCGCGTGA CCGACATCAT GGGCGAGATC ACGGCGGCCA GCCAGGAACA GAGCGCCGGC
ATCGAACAGG TCAACCAGGC CATCGCCCAG ATGGACGAAG TGACGCAGCA GAATGCCGCC
CTGGTGGAGG AGGCGGCAGC GGCGGCGTCT TCCATGCAGG ACCAGGCGGC CAATCTGGCT
GAGGCGGTGA GCGTGTTCAG GCTCGCCGGC GTCAACACGC AGCGCCCGGA ACAGCTGACA
TCGAACGAGC GGATCGCGGC GCTGCCGGCC CGGACCCATA CGGCCGCGGC ACCCGTGGTG
CGCACGAAGA AGCTCGCGGC TATCCAGGGT TCAAGCGGCG GCGAGTGGGA AGAGTTCTGA
|
|---|
| Protein sequence | MKIGARLGLG FASVLLLLVV VAVIGVWRLQ TVGMMTDSLV KNEMHKARII NEWESIINAN
AVRALAAAKT NNPETEKFFV DASAAASKGG IALQKQLESL LTDAESRALF AAIADKRSAY
LAARDAALKE KAAGNVLGAK KFVDEDMKPR LDAYLESLHD LARYQKQAID ATAGNIHRQY
ESGRMLLIGL SIVALMMGIG FAFWITRSIT RPMNQAVKVA QTVAAGDLTS RIEVEGKDET
GRLLQALKDM NDSLVKIVGQ VRLGTDAIAT ASSEIATGNL DLSSRTEEQA SSLEETASSM
EQLTSTVKQN ADHARQANQM AVSASEVAVK GGAVVAQVVD TMGSINESSR KIVDIIAVID
GIAFQTNILA LNAAVEAARA GEQGRGFAVV ASEVRSLAQR SAGAAKEIKT LIGDSVEKAD
IGSKLVGQAG ATMDEIVASV KRVTDIMGEI TAASQEQSAG IEQVNQAIAQ MDEVTQQNAA
LVEEAAAAAS SMQDQAANLA EAVSVFRLAG VNTQRPEQLT SNERIAALPA RTHTAAAPVV
RTKKLAAIQG SSGGEWEEF
|
|---|
| |