More than 300 homologs were found in PanDaTox collection
for query gene Rfer_0990 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  100 
 
 
542 aa  1068    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  58.49 
 
 
583 aa  557  1e-157  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  57.93 
 
 
552 aa  525  1e-148  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  53.35 
 
 
578 aa  488  1e-137  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  53.64 
 
 
580 aa  484  1e-135  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  53.87 
 
 
537 aa  459  9.999999999999999e-129  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  50.18 
 
 
559 aa  456  1e-127  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  77.67 
 
 
589 aa  449  1e-125  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  53.99 
 
 
596 aa  448  1.0000000000000001e-124  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  56.38 
 
 
589 aa  443  1e-123  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  69.42 
 
 
579 aa  441  9.999999999999999e-123  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  51.8 
 
 
511 aa  433  1e-120  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  73.44 
 
 
586 aa  431  1e-119  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  65.94 
 
 
527 aa  427  1e-118  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  67.63 
 
 
557 aa  427  1e-118  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  50 
 
 
559 aa  424  1e-117  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  48.52 
 
 
577 aa  423  1e-117  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  71.21 
 
 
532 aa  419  1e-116  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  52.71 
 
 
592 aa  420  1e-116  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  50.97 
 
 
598 aa  421  1e-116  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  49.73 
 
 
584 aa  409  1e-113  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  75.95 
 
 
578 aa  411  1e-113  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  47.53 
 
 
535 aa  411  1e-113  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  48.06 
 
 
569 aa  409  1e-113  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  62.6 
 
 
573 aa  409  1e-113  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  47.65 
 
 
553 aa  406  1.0000000000000001e-112  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  65.76 
 
 
532 aa  403  1e-111  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3464  methyl-accepting chemotaxis sensory transducer  46.32 
 
 
551 aa  404  1e-111  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  70.83 
 
 
471 aa  402  1e-111  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_011992  Dtpsy_1752  methyl-accepting chemotaxis sensory transducer  48.09 
 
 
523 aa  404  1e-111  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  48.53 
 
 
579 aa  403  1e-111  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  48.34 
 
 
581 aa  401  9.999999999999999e-111  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_013421  Pecwa_3618  methyl-accepting chemotaxis sensory transducer  47.88 
 
 
551 aa  401  9.999999999999999e-111  Pectobacterium wasabiae WPP163  Bacteria  normal  0.453306  n/a   
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  47.49 
 
 
554 aa  397  1e-109  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  48.08 
 
 
513 aa  397  1e-109  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  49.82 
 
 
537 aa  398  1e-109  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  47.98 
 
 
513 aa  392  1e-108  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  46.03 
 
 
595 aa  391  1e-107  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  48.26 
 
 
579 aa  392  1e-107  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  56.04 
 
 
536 aa  389  1e-107  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  66.77 
 
 
653 aa  386  1e-106  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  46.51 
 
 
591 aa  389  1e-106  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  65.59 
 
 
653 aa  386  1e-106  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  46.42 
 
 
584 aa  388  1e-106  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  68.57 
 
 
659 aa  385  1e-106  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  47.59 
 
 
508 aa  388  1e-106  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_008752  Aave_1343  methyl-accepting chemotaxis sensory transducer  48.46 
 
 
620 aa  385  1e-105  Acidovorax citrulli AAC00-1  Bacteria  normal  0.244601  normal  0.213177 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  44.57 
 
 
589 aa  379  1e-104  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  47.76 
 
 
591 aa  380  1e-104  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  60.82 
 
 
680 aa  373  1e-102  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  71.52 
 
 
614 aa  373  1e-102  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  68.51 
 
 
589 aa  375  1e-102  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  68.75 
 
 
642 aa  372  1e-102  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  67.2 
 
 
539 aa  372  1e-102  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  48.44 
 
 
516 aa  372  1e-101  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  45.73 
 
 
525 aa  372  1e-101  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  43.5 
 
 
602 aa  365  2e-99  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_008752  Aave_1344  methyl-accepting chemotaxis sensory transducer  50.98 
 
 
536 aa  364  2e-99  Acidovorax citrulli AAC00-1  Bacteria  normal  0.129873  normal  0.199885 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  70.14 
 
 
515 aa  362  9e-99  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_008752  Aave_0227  methyl-accepting chemotaxis sensory transducer  47.95 
 
 
592 aa  362  9e-99  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  58.74 
 
 
598 aa  361  2e-98  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  60.11 
 
 
586 aa  360  3e-98  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  57.06 
 
 
580 aa  359  8e-98  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  60.38 
 
 
650 aa  357  2.9999999999999997e-97  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  50 
 
 
567 aa  357  2.9999999999999997e-97  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5082  methyl-accepting chemotaxis sensory transducer  49.9 
 
 
589 aa  357  2.9999999999999997e-97  Delftia acidovorans SPH-1  Bacteria  normal  0.678642  normal  0.0204532 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  58.07 
 
 
584 aa  355  7.999999999999999e-97  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  55.61 
 
 
572 aa  355  1e-96  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  59.89 
 
 
584 aa  354  2e-96  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  56.6 
 
 
587 aa  355  2e-96  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_012856  Rpic12D_1408  methyl-accepting chemotaxis sensory transducer  47.83 
 
 
513 aa  353  4e-96  Ralstonia pickettii 12D  Bacteria  normal  0.0312904  normal  0.0311205 
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.38 
 
 
564 aa  352  1e-95  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
NC_013421  Pecwa_2831  methyl-accepting chemotaxis sensory transducer  39.43 
 
 
554 aa  352  1e-95  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0172  methyl-accepting chemotaxis sensory transducer  46.3 
 
 
550 aa  350  3e-95  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  61.27 
 
 
622 aa  350  3e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  52.14 
 
 
554 aa  350  5e-95  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  51.21 
 
 
588 aa  349  7e-95  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  43.01 
 
 
575 aa  348  1e-94  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  50.43 
 
 
618 aa  347  2e-94  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  45.86 
 
 
543 aa  347  2e-94  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  64.74 
 
 
566 aa  347  3e-94  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  56.36 
 
 
628 aa  347  3e-94  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  56.5 
 
 
630 aa  347  4e-94  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  64.08 
 
 
615 aa  347  5e-94  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  64.08 
 
 
615 aa  347  5e-94  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3119  methyl-accepting chemotaxis sensory transducer  54.4 
 
 
554 aa  346  6e-94  Rhodoferax ferrireducens T118  Bacteria  normal  0.813886  n/a   
 
 
-
 
NC_012917  PC1_2526  methyl-accepting chemotaxis sensory transducer  40.07 
 
 
554 aa  345  8.999999999999999e-94  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  45.49 
 
 
549 aa  345  8.999999999999999e-94  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  54.08 
 
 
566 aa  345  8.999999999999999e-94  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  56.22 
 
 
570 aa  345  1e-93  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  44.61 
 
 
547 aa  345  1e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  61.44 
 
 
752 aa  345  2e-93  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  59.38 
 
 
608 aa  344  2e-93  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  59.38 
 
 
608 aa  344  2e-93  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  52.93 
 
 
562 aa  343  2.9999999999999997e-93  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_012880  Dd703_2081  methyl-accepting chemotaxis sensory transducer  53.35 
 
 
668 aa  344  2.9999999999999997e-93  Dickeya dadantii Ech703  Bacteria  normal  0.622232  n/a   
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  59.89 
 
 
579 aa  343  2.9999999999999997e-93  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  62.46 
 
 
705 aa  343  4e-93  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  54.6 
 
 
651 aa  343  4e-93  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_009832  Spro_0080  methyl-accepting chemotaxis sensory transducer  56.74 
 
 
642 aa  343  5e-93  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
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