| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1588 |
|---|
| Symbol | |
|---|
| ID | 6123264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1751008 |
|---|
| End bp | 1752774 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641638169 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001764883 |
|---|
| Protein GI | 170732936 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.834305 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTTCA GGAACCTGAC GATTCGTGCG CGCATCGGTT TGACGATGGC GTTTCTGGCG
GTACTGCTGG GTGTCACCGG CGTGCTCGGT CTGTACGGGA TGACGCGTGC GAACGATTCG
ACGCGCGAGA TTTTCACGAA CCAGATGCCG AGCGCGGTCA ACGTGGCGAT GGCGGAAATG
TTCGCCGCAC GCGAGCGTCT CGCACTCGAC CGGGCGGCGC TGCTGGTCGG CACGCCGGAT
TCCACGGCCG CCATCGAGCG CAGCCGTGCG ATGCGCGGGC AGTCCGACGC TTGGTGGCAG
AAATACCTCG CGCTGCCGCG CGGCACGGAG GAAGACCGGC TCGCACAGGA CGTCGCCGCC
CGGCGCAAGG TGCTGCAGGA CAGTTGCGAC GCGTTCGCGA CGGCGATCGG GACGGGCGAT
CACGACCAGA TCGGCGGCGG CGCGAAGCAG CTCCAGGCCC GCTATAACGA TCTGGCCGTG
GCCGGCGAAG CGCTGCGCAC CTTCCAGTTC ACCGACGCGC AGACGCGCTT CGATCAGGCG
GAATCGGTAT TCGAGACGAT GCGCGTGCTG TCGATCGTGG TGCTGCTGGC CGGCGTCGGC
GCCGCGGTGC TGTCGTGGCT GACGCTGAGC CGCGCGATCG GCCGCCCGAT CGCCGACGCG
CTGTCGCATT TCGACGCGAT CGCCGCAGGC GACTTGCGCC GGCCGATCGT CGTCGACCGG
CGCGACGAGA TGGGCCAGAT GCTGGAAGGC CTCGCGAGGA TGCAGCGCGG GCTCGTCGAC
ACGGTGCGCA CCGTGCGCGG CGGCAGCGAG TCGATCGCGA CTGCGGCCCG CCAGATCGCG
GCCGGTAACA TCGACCTGTC GTCACGCACC GAGGAACAGG CTGCCGCGCT GCAGGAAACC
GCGTCGAGCA TGGAGCAGCT GACGGGCACG GTGAAGCAGA ATGCCGACAA TGCGCGCCAG
GCAAGCTCGC TGGCCGCGAA TGCGTCCGAC ATTGCAAACA AGGGCAATAC GGTGGTCGGC
CAGGTGGTCG GCACGATGGG CGAAATCAAC GACAGCTCGG CCAAAATCGC GGACATCATC
GCGATCATCG AGGGAATCGC GTTCCAGACC AACATTCTTG CGCTGAATGC GGCCGTCGAA
GCCGCGCGGG CGGGAGAGGA AGGCCGCGGC TTCGCGGTGG TCGCGGGCGA AGTGCGCAGC
CTCGCGCAGC GTTCGTCGAG CGCGGCGAAG GAAATCAAGG CGCTGATCGA CGCGTCGGTG
GAGCGTATCC GGACGGGCTC GACGCTGGTC GACGAAGCCG GGCGCACGAT GAGCGACGTG
ATCGGCGCGG TCCAGCGCGT GACCGACATC ATGGGCGAGA TCGCGGCGGC GTCCGAGGAG
CAGAGCAGCG GGATCGACCA GGTGGCGCGC GCGGTCGCGC AGATGGACGA GGTCACGCAG
CAGAATGCCG CGCTCGTCGA GGAAGCGGCG GCCGCCGCGC AGTCGCTCGA GGAACAGGCG
GCCCGCCTGC GCGAAACCGC GGCGGTGTTC CAGCTCGACG ACGAAGCAAC ACGAGCGGGC
ACCGTCGTTG CGGTGGCGCG TCATGCGCCG CGTGCGCCTG CCGCGCCGGC CGCTGCGCCC
GCAGCACCGG CTGCGGCGTG CGTCGAACGC GACGCCGCGC CGAAACGCGC ACCCGCCGCG
ACGCCGGCGC GCAAGCCCGC CGCCGTATCG GCCGCTCCCA CACCGGCAGT CGCGACCGCC
GGCGGTGACG ACTGGGAGAC GTTCTGA
|
|---|
| Protein sequence | MVFRNLTIRA RIGLTMAFLA VLLGVTGVLG LYGMTRANDS TREIFTNQMP SAVNVAMAEM
FAARERLALD RAALLVGTPD STAAIERSRA MRGQSDAWWQ KYLALPRGTE EDRLAQDVAA
RRKVLQDSCD AFATAIGTGD HDQIGGGAKQ LQARYNDLAV AGEALRTFQF TDAQTRFDQA
ESVFETMRVL SIVVLLAGVG AAVLSWLTLS RAIGRPIADA LSHFDAIAAG DLRRPIVVDR
RDEMGQMLEG LARMQRGLVD TVRTVRGGSE SIATAARQIA AGNIDLSSRT EEQAAALQET
ASSMEQLTGT VKQNADNARQ ASSLAANASD IANKGNTVVG QVVGTMGEIN DSSAKIADII
AIIEGIAFQT NILALNAAVE AARAGEEGRG FAVVAGEVRS LAQRSSSAAK EIKALIDASV
ERIRTGSTLV DEAGRTMSDV IGAVQRVTDI MGEIAAASEE QSSGIDQVAR AVAQMDEVTQ
QNAALVEEAA AAAQSLEEQA ARLRETAAVF QLDDEATRAG TVVAVARHAP RAPAAPAAAP
AAPAAACVER DAAPKRAPAA TPARKPAAVS AAPTPAVATA GGDDWETF
|
|---|
| |