Gene BURPS1106A_3934 details

Gene Information

• Locus tag: BURPS1106A_3934
• ID: 4900305
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: -
• Start bp: 3840687
• End bp: 3842708
• Gene Length: 2022 bp
• Protein Length: 673 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 640137160
• Product: methyl-accepting chemotaxis protein
• Protein accession: YP_001068154
• Protein GI: 126452850
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.3175
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGCACA ACTGGTCGAT CCGCACGACG CTGACGGCCG TCGGATTCAT GCTGGTGCTC 
GTCGCCGCGC TGGTCGGCGG GCTCGGGCTG TATGCGCTCA ATCACGCGAG CCGCTCGCTC 
GACGCGATCG CGCACGGCGA TCTGCCGACG ATCCACACGC TCGACGACGC GTCGTCCTAT 
CTGCTGCGCT CGCGCGTCGC GCTCGACCGC TTCAAGACGC TGTCCGAGGC GGGCAACGCC 
GACGAGGCGA AGAAAGTGCT CGCGCGCGCG CAGGAGCTCT ACGCGAAGTC GACGCAGAAC 
TGGCAGGCGT ACATGGCCGC GTCGAAGGAG GGCATCGATT CAGCGCTGAC CGACGAGCTC 
GCCGCGCGCT ACGCGACGCT CGCGAAGGAA GGCGTCGAGC CGGAGTTCGC CGCCGCGGGC 
GCGGGCGACC TCGCCGCGTA TCACGCGATC GCCGACACGA AGATCAGCCC GATGTTCGTC 
GCGTACGACA AGGCGGCCGC CGCGGTGATC GCCGCGTATT CGAAGCGCGC GGAATCGCGC 
TTCGACGCGA CGCAGGCGCG CATCTCGCTG ATGATCGCGC TGATCGCGGC GGGCATCGCC 
GCCGCGTTCC TGATGGTGAT CGGCATTCGC TTCGCGCTGC GCGGGCTCAT CGTGCAGCCG 
CTGAACGTCG CGATCGCGCA GTTCGAGCGG ATCGCGGCGG GCGACCTCAC GCAGGCGACG 
CGCATCGCCG GCAACAACGA AATCGGCCGG CTTTTCCAGG GCATCGGCCG GATGCAGACG 
GCCGTCGGCG ACATGGTGAA GGCCGTGCAT CGCGGCGCGG AAGCGGTCGA CCTCGGCGCG 
CGCGAGATTT CGAGCGGCAA CGCGGACCTG TCCGCGCGCA CCGAATCGCA GGCGGCCTCG 
CTGCAGGAAA CCGCATCGAG CATGGAGCAA CTGACGGGCA CGGTGCGCCA GAACGCGGAA 
AACGCGCGGC AGGCGAGCCA GCTCGCGGTC AACGCGTCCG ACATCGCGAC GCAGGGCGGC 
GAGGTCGTCG GCCAGGTCGT CACGACGATG CAGGACATCG CGACGAGCTC GTCGAAGGTC 
GCCGACATCA TCGGCACGAT CGAGGGGATC GCGTTCCAGA CCAACATCCT CGCGCTGAAC 
GCGGCCGTCG AGGCGGCGCG CGCGGGCGAA CAGGGCCGCG GCTTCGCGGT GGTCGCGGGC 
GAGGTGCGCT CGCTCGCGCA GAGAAGCGCG ACGGCCGCGA AGGAAATCAA GCAGTTGATC 
GGCGACTCCG CGCACAAGGT GCAAAGCGGC TCCGCGCTCG TCGAGCGCGC GGGCGCGACG 
ATGGCCGAGA TCGTCCAGGC GGTGCGGCGC GTGACCGACA TCATGGGCGA GATCAGCGCG 
GCGTCCGAAG AGCAGTCGAC GGGCATCGTC CAGGTGAACC GCGCGGTCAG CCAGATGGAC 
GCCGTCACGC AGCAGAACGC GGCACTCGTC GAGCAAGCGG CGGCCGCGGC CGCGTCGCTC 
GAGGATCAGA CGCGGCAGAT GAAGCAGATC GTCTCGGCAT GGCGCGTCGA AGGCGCAAGC 
GCGGCGGCGA CGCCGGCCGC GTCGACGTCG GCGGCCGCGA GCGTGCGTTC GAACGTGAAC 
GCCCGTGCGA GCACGTCGAG CGAGCCGCAT GCGGTCGCTC ATGCCGTCGC ATCCGCGACG 
CATGCCGCGG ACGCGACGGC CGGCGGAGCC GGATCGCCGC GTTCGCCCGC CGCCGCGCAC 
GCTTCGCACG GCGAGCAGCG CGGGACGCAC GCCGCGCCGT ATGGCGCGAA GCCCGCCGCC 
GCGCCGAAGC CCGCCGCCGC GCCGGCCGCG GCCGGCTATG CACCGAAGCT CGCGAAGCCG 
GGCGCTGCCG CGCGCCCCGC GGCGAGCCCG GCCGACGCCG CCGCGCCGCA AGCCGCCCCC 
GCTCCCGCGT CCTCCTTCGC ACTCAAGCGC CCGGCGCTGT CGGGCGAGCC GAAGCCCGCG 
GCCGCGTCGG CATCCTCCGA CGACGACTGG GAAACCTTCT AA 

 

Protein sequence

MLHNWSIRTT LTAVGFMLVL VAALVGGLGL YALNHASRSL DAIAHGDLPT IHTLDDASSY 
LLRSRVALDR FKTLSEAGNA DEAKKVLARA QELYAKSTQN WQAYMAASKE GIDSALTDEL 
AARYATLAKE GVEPEFAAAG AGDLAAYHAI ADTKISPMFV AYDKAAAAVI AAYSKRAESR 
FDATQARISL MIALIAAGIA AAFLMVIGIR FALRGLIVQP LNVAIAQFER IAAGDLTQAT 
RIAGNNEIGR LFQGIGRMQT AVGDMVKAVH RGAEAVDLGA REISSGNADL SARTESQAAS 
LQETASSMEQ LTGTVRQNAE NARQASQLAV NASDIATQGG EVVGQVVTTM QDIATSSSKV 
ADIIGTIEGI AFQTNILALN AAVEAARAGE QGRGFAVVAG EVRSLAQRSA TAAKEIKQLI 
GDSAHKVQSG SALVERAGAT MAEIVQAVRR VTDIMGEISA ASEEQSTGIV QVNRAVSQMD 
AVTQQNAALV EQAAAAAASL EDQTRQMKQI VSAWRVEGAS AAATPAASTS AAASVRSNVN 
ARASTSSEPH AVAHAVASAT HAADATAGGA GSPRSPAAAH ASHGEQRGTH AAPYGAKPAA 
APKPAAAPAA AGYAPKLAKP GAAARPAASP ADAAAPQAAP APASSFALKR PALSGEPKPA 
AASASSDDDW ETF