More than 300 homologs were found in PanDaTox collection
for query gene Rfer_0925 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  100 
 
 
552 aa  1097    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  71.08 
 
 
583 aa  740    Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  57.93 
 
 
542 aa  531  1e-149  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  54.12 
 
 
578 aa  514  1e-144  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  55.23 
 
 
513 aa  513  1e-144  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  55.19 
 
 
513 aa  510  1e-143  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  54.75 
 
 
580 aa  511  1e-143  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  55.21 
 
 
581 aa  494  9.999999999999999e-139  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_008752  Aave_0227  methyl-accepting chemotaxis sensory transducer  57.37 
 
 
592 aa  494  9.999999999999999e-139  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  55.21 
 
 
579 aa  495  9.999999999999999e-139  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  53.04 
 
 
595 aa  484  1e-135  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  53.14 
 
 
559 aa  481  1e-134  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  70 
 
 
596 aa  469  1.0000000000000001e-131  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  51.67 
 
 
589 aa  466  9.999999999999999e-131  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  54.93 
 
 
592 aa  466  9.999999999999999e-131  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  52.34 
 
 
559 aa  462  1e-129  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  52.69 
 
 
537 aa  458  9.999999999999999e-129  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_013421  Pecwa_3618  methyl-accepting chemotaxis sensory transducer  51.92 
 
 
551 aa  455  1e-127  Pectobacterium wasabiae WPP163  Bacteria  normal  0.453306  n/a   
 
 
-
 
NC_011992  Dtpsy_1752  methyl-accepting chemotaxis sensory transducer  50.1 
 
 
523 aa  458  1e-127  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3464  methyl-accepting chemotaxis sensory transducer  50.97 
 
 
551 aa  456  1e-127  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  51.84 
 
 
577 aa  454  1.0000000000000001e-126  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  53.12 
 
 
516 aa  448  1.0000000000000001e-124  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  52.24 
 
 
511 aa  446  1.0000000000000001e-124  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  49.4 
 
 
508 aa  446  1.0000000000000001e-124  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  50 
 
 
569 aa  441  9.999999999999999e-123  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  50.38 
 
 
525 aa  441  9.999999999999999e-123  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_008752  Aave_1343  methyl-accepting chemotaxis sensory transducer  51.38 
 
 
620 aa  440  9.999999999999999e-123  Acidovorax citrulli AAC00-1  Bacteria  normal  0.244601  normal  0.213177 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  58.51 
 
 
586 aa  432  1e-120  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  67.48 
 
 
579 aa  434  1e-120  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  55.09 
 
 
532 aa  427  1e-118  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  69.23 
 
 
527 aa  422  1e-116  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  46.32 
 
 
553 aa  421  1e-116  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  50.5 
 
 
557 aa  420  1e-116  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  63.54 
 
 
598 aa  416  9.999999999999999e-116  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  74.83 
 
 
578 aa  412  1e-113  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  45.73 
 
 
554 aa  412  1e-113  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  50.29 
 
 
584 aa  411  1e-113  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  65.09 
 
 
589 aa  410  1e-113  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  59.63 
 
 
535 aa  397  1e-109  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  46.63 
 
 
573 aa  397  1e-109  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  47.65 
 
 
589 aa  397  1e-109  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  65.63 
 
 
532 aa  395  1e-108  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  57.04 
 
 
614 aa  394  1e-108  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  48.35 
 
 
584 aa  393  1e-108  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  48.09 
 
 
537 aa  389  1e-107  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  68.28 
 
 
659 aa  389  1e-107  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  69.71 
 
 
471 aa  388  1e-106  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  66.67 
 
 
579 aa  383  1e-105  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  45.24 
 
 
589 aa  385  1e-105  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  53.64 
 
 
536 aa  382  1e-104  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  62.19 
 
 
642 aa  378  1e-103  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  44.32 
 
 
586 aa  369  1e-101  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_008752  Aave_0772  methyl-accepting chemotaxis sensory transducer  54 
 
 
612 aa  372  1e-101  Acidovorax citrulli AAC00-1  Bacteria  normal  0.343543  normal  0.663369 
 
 
-
 
NC_013421  Pecwa_2831  methyl-accepting chemotaxis sensory transducer  41.59 
 
 
554 aa  370  1e-101  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  68.12 
 
 
515 aa  369  1e-100  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  63.98 
 
 
653 aa  363  3e-99  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  45.32 
 
 
575 aa  364  3e-99  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  63.98 
 
 
653 aa  363  3e-99  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  47.26 
 
 
572 aa  363  4e-99  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  44.75 
 
 
549 aa  363  6e-99  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  44.87 
 
 
591 aa  362  1e-98  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_008752  Aave_1344  methyl-accepting chemotaxis sensory transducer  45.78 
 
 
536 aa  361  2e-98  Acidovorax citrulli AAC00-1  Bacteria  normal  0.129873  normal  0.199885 
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  44.05 
 
 
591 aa  360  4e-98  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  45.98 
 
 
650 aa  358  9.999999999999999e-98  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  44.38 
 
 
548 aa  358  9.999999999999999e-98  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4495  methyl-accepting chemotaxis sensory transducer  44.49 
 
 
605 aa  358  9.999999999999999e-98  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0928828 
 
 
-
 
NC_012917  PC1_2526  methyl-accepting chemotaxis sensory transducer  40.48 
 
 
554 aa  357  2.9999999999999997e-97  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4047  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
559 aa  357  2.9999999999999997e-97  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2119  methyl-accepting chemotaxis sensory transducer  38.77 
 
 
549 aa  356  5e-97  Enterobacter sp. 638  Bacteria  normal  normal  0.164628 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  42.86 
 
 
543 aa  355  1e-96  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  45.59 
 
 
520 aa  355  1e-96  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  50.72 
 
 
587 aa  353  2.9999999999999997e-96  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  51.31 
 
 
580 aa  354  2.9999999999999997e-96  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  53.39 
 
 
566 aa  353  5e-96  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  51.84 
 
 
622 aa  353  5e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5082  methyl-accepting chemotaxis sensory transducer  48.11 
 
 
589 aa  352  8.999999999999999e-96  Delftia acidovorans SPH-1  Bacteria  normal  0.678642  normal  0.0204532 
 
 
-
 
NC_008825  Mpe_A0335  methyl-accepting chemotaxis protein I  57.48 
 
 
394 aa  352  8.999999999999999e-96  Methylibium petroleiphilum PM1  Bacteria  normal  0.809135  normal  0.684623 
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  51.6 
 
 
585 aa  352  1e-95  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4446  methyl-accepting chemotaxis sensory transducer  44.01 
 
 
605 aa  351  2e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0260008  normal  0.622584 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  64.58 
 
 
584 aa  350  3e-95  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  49.76 
 
 
547 aa  350  3e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
NC_007908  Rfer_3119  methyl-accepting chemotaxis sensory transducer  43.22 
 
 
554 aa  350  5e-95  Rhodoferax ferrireducens T118  Bacteria  normal  0.813886  n/a   
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  45.56 
 
 
618 aa  349  9e-95  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  54.2 
 
 
562 aa  347  2e-94  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_012912  Dd1591_0695  methyl-accepting chemotaxis sensory transducer  41.83 
 
 
561 aa  347  2e-94  Dickeya zeae Ech1591  Bacteria  normal  0.305861  n/a   
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  64.26 
 
 
584 aa  348  2e-94  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3863  methyl-accepting chemotaxis sensory transducer  41.27 
 
 
560 aa  346  7e-94  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  44.37 
 
 
565 aa  345  8e-94  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  61.49 
 
 
597 aa  345  1e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  57.95 
 
 
522 aa  344  2e-93  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  43.33 
 
 
602 aa  344  2e-93  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  57.95 
 
 
522 aa  344  2e-93  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  64.8 
 
 
539 aa  344  2e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_010002  Daci_0172  methyl-accepting chemotaxis sensory transducer  45.12 
 
 
550 aa  344  2.9999999999999997e-93  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  60.49 
 
 
585 aa  343  4e-93  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  51.74 
 
 
567 aa  343  5e-93  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  62.35 
 
 
608 aa  343  5.999999999999999e-93  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  62.35 
 
 
608 aa  343  5.999999999999999e-93  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  41.36 
 
 
559 aa  342  1e-92  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  54.87 
 
 
554 aa  342  1e-92  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
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