Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5852 |
Symbol | |
ID | 5751473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 6505703 |
End bp | 6507559 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641300984 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001566865 |
Protein GI | 160901283 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.217953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAATTTA ACAATTCACC CTTAGGGCTT TATCAAATAA ATCATTTATT TTTGATAGAA ACTGATACTT GCACCACCTA CCTGGAAAGC GCCATGAATC TCCGCACCTG GACCGTCAAG ACCAAGCTCT ACGCCGCCTT TACCGCCCTG GCTTTACTGG TCGCACTGGT TTCCGTATCT GCCCTTCATG CGCTGGACGG TTCCGACCGC AACCTGACCC AGTTCGTCGA CGGCGTGAAC GCCCGCGCCC ATCTGGCCGA ACAGGTGCGC GCGGCCGTGG ACAGCCGCGC CATCGCGGCG CGCAACCTGG TGCTGGTGAA CACGCCAGCC GATCTGGACA TGGAAAAAAC GGCCGTGTAC GCCGCCCATG CCGCGGTCAA GTCCCACCTG GACCAGCTCA AGGCCCTGGT GGCCGCGCCC GGGGTAGGCG AGGAGGCTCG CGCCCTGGTC GCCCGCATCG ACCAGATAGA GCAGCGCTAC GGCCCTGTGG CGCTGGACAT CGTTTCGCTG GCGCTGCGCC AGCAAAGGGA CGAGGCCATT GCCAAGATGA ACAGCGAGTG CCGGCCGCTG CTGGCCCAGC TGATCGCGGC CACCGACGAG TACAGCCAGC TCACGCGCCA GCACGCCCAG GTCATGGTGG AGCAGGCCAC GCAGTCCTAT GTGCAGCAAC GCAACATGCA GATCGGCGTG AGCGCGGTCG CCTTCGTGCT GGCCCTGCTC ATGGGCCGGC TGATCGCACG CGGCCTGACA CGCGCGCTGG GGGCCGAGCC TGCCCAGCTC GGTGAAGTCG CCCGCCAGAT CGCCGACGGC AACCTCGACC CCGGACTGGT GCGCAGCGAA GCGCCCGCCG GCAGCGTGCA GGCCTCGCTC AACGCCATGC ACCAGAGCCT GGCCAGCGTG GTCAGCGATG TGCGCAACAA CGCCGACAGC GTGGCCGTGG CCAGCGAGCA GATCGCCAAG GGCAATGCCG ACCTGAGCCG CCGCACCGAG CAGCAGGCCA GCGCGCTGCA GGAAACCGCA GCCTCCATGG ACGAGCTGTC TTCCACCGTG CAGCAGAACG CGGACAACGC GCGCCAGGTC AACCAGCTCG CGCGCGGCGC CAGCCAGATC GCGGCCAAGG GCGGCACCGT GGTGCAGGAA GTAGTGGGCG CCATGCAGGA CATCCATGCC AGCTCGCGCC AGATCGGCGA CATCGTGGGC GTGATCGACT CCATCGCCTT CCAGACCAAC ATCCTGGCCC TGAACGCCGC CGTCGAGGCC GCACGCGCCG GCGAGCAGGG CAAGGGCTTT GCCGTGGTGG CCGCCGAAGT GCGCACCCTG GCCCAGCGCA GCGCGCAGGC CGCCCGCGAG ATCAAGCAGC TCATCACTGA CAGCGCCACG CGCGTCAGCC AGGGCGCGGA GCTGGCCGAC CAGGCCGGCG CCACCATGGC CGAGGTGCTG CAATCCATAC AGCGCGTGAC CGACCTCATG GGCGAGATCA GCAATGCCAG CGACGAGCAA AGCGCCGGTG TGGCCCAGGT CGGGCAGGCC ATGAGCCAGA TGGACCAGGT CACGCAGCAA AACGCCGCCC TGGTGGAGGA AAGCGCGGCG GCGGCCTCCA GCCTCAAGTC CCAGGCCCAG CGCCTGGTGC AGGCCGTGGC CATCTTCCGC CTGGGCGACC AGGATGGCGC GGCACAGCAG CCGCGTTTGC AGGCGCCGCT GCCGGCGTCC GTGCCCACCC GCGCGGCCAC GGCATCCGCG CTGGCGCCGG CCAGGCCGGC ACCGGCACGA CCCGCAGCTG GCGCGCGCCC TGCAAGCCCT GCACGCCTGG CTGCGGCCAA ACCGTCTGCC GAATCGCAGG ACTGGACCAG CTTCTGA
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Protein sequence | MKFNNSPLGL YQINHLFLIE TDTCTTYLES AMNLRTWTVK TKLYAAFTAL ALLVALVSVS ALHALDGSDR NLTQFVDGVN ARAHLAEQVR AAVDSRAIAA RNLVLVNTPA DLDMEKTAVY AAHAAVKSHL DQLKALVAAP GVGEEARALV ARIDQIEQRY GPVALDIVSL ALRQQRDEAI AKMNSECRPL LAQLIAATDE YSQLTRQHAQ VMVEQATQSY VQQRNMQIGV SAVAFVLALL MGRLIARGLT RALGAEPAQL GEVARQIADG NLDPGLVRSE APAGSVQASL NAMHQSLASV VSDVRNNADS VAVASEQIAK GNADLSRRTE QQASALQETA ASMDELSSTV QQNADNARQV NQLARGASQI AAKGGTVVQE VVGAMQDIHA SSRQIGDIVG VIDSIAFQTN ILALNAAVEA ARAGEQGKGF AVVAAEVRTL AQRSAQAARE IKQLITDSAT RVSQGAELAD QAGATMAEVL QSIQRVTDLM GEISNASDEQ SAGVAQVGQA MSQMDQVTQQ NAALVEESAA AASSLKSQAQ RLVQAVAIFR LGDQDGAAQQ PRLQAPLPAS VPTRAATASA LAPARPAPAR PAAGARPASP ARLAAAKPSA ESQDWTSF
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