Gene Ajs_3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3087 
Symbol 
ID4671643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3257465 
End bp3259048 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content65% 
IMG OID639840132 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_987292 
Protein GI121595396 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.823637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGGTGGC CATCAGTGGG GGAGTTTGGG TGGCCGCCGG GGCGCTTCCA CCACCTGGAG 
CGGGAACATC TTGCGGCTGT CATGCAGATG GCACTCGCCA TGCAGCGGGC AAGCTCGGGT
GACACGGCCC CGGCGGTTGG CAAGGACCTG CTGCTCAAGC CGATCGAGCA CGGGCAGTGG
CTTGCCGCGC AGGTCGATGT GGAGTTGTTC AAGGTCGAGC AGGGGTTGTT CCGCTTGTTC
GGCTTTGGTG GCGTTCTTGA CTTGCCGAGC AAGGACATTG GCGACCTGGA GCGCATGAAG
AAAATCATCG AGCTCGAACC TGGCAGCACC GTGAGCCCGG CACTGGTCGA GCGGCTGCGA
CCCGACATGG CGGTGGTGCA AGATGGCTCC GAACGTTTCG CCCCGCTGGT GGCCGAGGCG
GTCGGCTTCA TCAAGGCGCT TGTCTTCAGC ATCAACCTGC TGGGCGGTCT GGTGCTGCTG
GCCTCCTTTT GGGCTATCCG CAAAGCGGTG CTCGGGCCGC TGGAGGAGGC GCTGCGGCTG
GCGGGCCAGA TTGCCCAGGG CGACCTCACC GGGCGCATCG TGACGCGTTC GAACGACGAA
GTCGGCCAAT TGATGACCGC CCTGGAGGAC ATGCAGGGCA GCCTGTCCAG CATGGTGGCC
CATGTGCGCC AGAACGCCGA GAGCCTGGAG GCGGCCAGTT CCGAGATTGC CCAGGGCAAC
CACGACCTGT CGGCGCGCAC CGAAAGCCAG GCCAGCTCCC TGGAAGAAAC CGCCGCCAGC
ATGGAGGAGT TGGGCTCCAC TGTGCGCCAG AACGCCGACA ACGCGCGCCA TGCGAACCAG
CTCGCGCAAA GCGCCAGCAC CGTGGCCGTC CAAGGCGGTG AAGCCGTGGC CCAGGTGGTC
AACACCATGA CAGGCATCAA CGAAAGCTCC CGCAAGATCG CCGACATCAT CAGCGTCATT
GACGGCATCG CCTTCCAGAC CAACATTCTG GCCCTGAATG CCGCCGTCGA GGCCGCCCGA
GCGGGCGAAC ACGGTCGCGG CTTTGCCGTG GTGGCCACCG AAGTGCGCAG CCTGGCCCAG
CGCAGCGCCG AGGCCGCCAA GGAAATCAAG ACCCTGATCA ACGACAGCGT GGGCCGGGTC
GAGCAAGGCA GCGCCTTGGT GGACCAGGCC GGCACCACTA TGAGAGAGGT CGTGGACAGC
ATTCGGCGCG TGACCGACAT CATGGGCGAG ATCAGCGCGG CCAGCACCGA GCAGAGCCAG
GGAGTAGCGC AGGTGGGCGA GGCCGTCACC AATATGGACC AGGCAACGCA ACAGAACGCG
GCGCTGGTCG AGCAGATGGC CGCCGCGGCC TCCAGACTGA AGGGTCAGTC CGAAGAGCTG
GTGCAGACGG TGGCGGTGTT CAAACTGGCG GACGATGGCA GTTCCGACCC GGCTGCCTAC
GCACAAGACC AGTCGCATGG GAGAACTGCG CCGCACCGGT TGGCAGACCA CCGACATCCT
GATCCTCAGC CATGGCCGAC CGCGGCAGTC AATATGGGTT TGCTGGAAGC TTATGCTTCA
GAGAAAAGCT CGACGAACAA CTGA
 
Protein sequence
MRWPSVGEFG WPPGRFHHLE REHLAAVMQM ALAMQRASSG DTAPAVGKDL LLKPIEHGQW 
LAAQVDVELF KVEQGLFRLF GFGGVLDLPS KDIGDLERMK KIIELEPGST VSPALVERLR
PDMAVVQDGS ERFAPLVAEA VGFIKALVFS INLLGGLVLL ASFWAIRKAV LGPLEEALRL
AGQIAQGDLT GRIVTRSNDE VGQLMTALED MQGSLSSMVA HVRQNAESLE AASSEIAQGN
HDLSARTESQ ASSLEETAAS MEELGSTVRQ NADNARHANQ LAQSASTVAV QGGEAVAQVV
NTMTGINESS RKIADIISVI DGIAFQTNIL ALNAAVEAAR AGEHGRGFAV VATEVRSLAQ
RSAEAAKEIK TLINDSVGRV EQGSALVDQA GTTMREVVDS IRRVTDIMGE ISAASTEQSQ
GVAQVGEAVT NMDQATQQNA ALVEQMAAAA SRLKGQSEEL VQTVAVFKLA DDGSSDPAAY
AQDQSHGRTA PHRLADHRHP DPQPWPTAAV NMGLLEAYAS EKSSTNN