Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3412 |
Symbol | cheD4 |
ID | 1222276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3688152 |
End bp | 3689699 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637239829 |
Product | putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein |
Protein accession | NP_521531 |
Protein GI | 17548129 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.934147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGCAACT GGACCGTCAA GAGAAAGCTT GCCACCCTGG TCGCCTCGAT CATCATTGCC TTCGTGTGCC TGACCGTCTT CCTGCTCGGG CGCCAGGCCG CCGCGACGGC GGACATCCGG AGCCTGTACG ACAAGGACTA TCGCGCGGCG TCGATCATCG GCCAGATCGA CGGGCTGCTC ACCCGCGTGG ATATCAACAT CCTGCGGATG ATCGCCATCG GCGATCCGGC TTCCATCTCG GGCTGGAAGG CCCAGAACAC GGAGCGTTTC AACAAGGTCG ACCAACTGCT GGTGGAGTTG GACGCATCGG CCGACCCGAG CATGGCGGCA TCGATCAAGA CCCTGGGCGA GGCCTATGGC CGCATGCGCA AGGGCATGGA GCACCAGGTC GAGGCGGTCG AGGCGGGTGA TATCAAGCGC GGCGGCGAGA TCAACAAGAA CGAGGTCAAG GACAACGCCG ACAAGACGTT CGGCACGCTG GCCGAGCTCA AGAGCGCGCA GGACCTGATC GCCAAGAACA AGGTCCAGGC CCAGGAAGCG GCGGCGGCAT TGGCCCGCGT GGTCTCGATC ACGGCGGCGG CGCTGATCGC GCTCGGCTCG CTGGGTCTCG GGCTGCTGAT GCTGCGCGAC CTGCTGCGCC AGCTCGGCGG CGAGCCGTCG GTGGCGGCCC AGGCGGTCAG CGCCATGGCG CAGGGCGACC TTTCCCGCGT GATTGCCGTC GACGCAGACG ATAGGACGAG CCTGCTGGCC AAGCTCAAGG AGATGCAGGC GTCGCTGTCC GGCATCGTGG CCACCGTGCG CAACAACGCC GAAAGCGTGG CCACGGCCAG CGCCCAGATC GCGCAGGGCA ATCAGGACCT GAGCCATCGC ACCGAGCAGC AGGCCAGCGC GCTGCAGGAG ACGTCGGCGA CGATGGATGA GCTGGGCTCG ACCGTGGGCA ACAATGCCGA GAACGCGCGC CAGGCCAATC AGCTCGCGTC GGGGGCCTCC AGCGTTGCCG CCGAGGGTGG CGAGGTGGTC AGCCAGGTGG TCGGCATGAT GAAGGGGATC AACGATGGCT CCAAGAAGAT CGCCGACATC ATCGGCGTCA TCGACGGCAT TGCGTTCCAG ACCAACATTC TGGCGTTGAA CGCCGCGGTG GAGGCCGCAC GCGCGGGCGA GCAGGGCCGC GGGTTCGCGG TGGTCGCCGC CGAGGTGCGC AGCCTGGCGC AGCGCAGTGC CGCGGCTGCC AAGGAAATCA AGGCGTTGAT CACGAGCAGT GTCGAGCAGG TTGAACAGGG CACCACGCTG GTCGACCGGG CCGGCGCGAC GATGGAACAG ATCGTGGGCG CGATCCAGCG CGTGTCCAAC ATCGTCGCCG AGATCAGCTC GGCCAGCGCG GAGCAGAGCT CCGGCGTCTC GCAGGTCGGC CAGGCCGTCA GCCAGATGGA CGAGGCCACG CAGCAGAACG CCGCGCTGGT CGAGCAAAGC GCGGCGGCCG CGAGCAGCCT GCAAGGCCAG GCACAGCAGC TCGTGCAGGC CGTCGCGGTG TTCAAGCTGG CGCGGTAG
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Protein sequence | MRNWTVKRKL ATLVASIIIA FVCLTVFLLG RQAAATADIR SLYDKDYRAA SIIGQIDGLL TRVDINILRM IAIGDPASIS GWKAQNTERF NKVDQLLVEL DASADPSMAA SIKTLGEAYG RMRKGMEHQV EAVEAGDIKR GGEINKNEVK DNADKTFGTL AELKSAQDLI AKNKVQAQEA AAALARVVSI TAAALIALGS LGLGLLMLRD LLRQLGGEPS VAAQAVSAMA QGDLSRVIAV DADDRTSLLA KLKEMQASLS GIVATVRNNA ESVATASAQI AQGNQDLSHR TEQQASALQE TSATMDELGS TVGNNAENAR QANQLASGAS SVAAEGGEVV SQVVGMMKGI NDGSKKIADI IGVIDGIAFQ TNILALNAAV EAARAGEQGR GFAVVAAEVR SLAQRSAAAA KEIKALITSS VEQVEQGTTL VDRAGATMEQ IVGAIQRVSN IVAEISSASA EQSSGVSQVG QAVSQMDEAT QQNAALVEQS AAAASSLQGQ AQQLVQAVAV FKLAR
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